BGIOSGA004131

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Revision as of 11:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004131| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004131, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA004131

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004131, complete gene.

LocusTag

OSJNBB0006H05.28-1

Ensembl Transcript ID

BGIOSGA004131-TA

Ensembl Protein ID

BGIOSGA004131-PA

Length

6579

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29720182..29726760

Sequence Coding Region

29720182..29720299,29721592..29721671,29721867..29721953,29722640..29722690,29722775..29722892
,29723062..29723118,29723209..29723273,29723748..29723831,29723935..29723985
,29724068..29724130,29724210..29724256,29724349..29724427,29724559..29724621
,29724955..29725044,29725126..29725164,29725248..29725475,29725566..29725651
,29725744..29725792,29725880..29725960,29726053..29726146,29726582..29726760

Genome Context

<gbrowseImage1> name=IndicaChromosome01:29720182..29726760 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:29720182..29726760 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGTACGTGCTGGTGACAGGAGGGGTGGTGAGCGGCCTCGGCAAGGGCGTGACCGCGAGCAGCATCGGCGTCGTGCTCAAGGCCTGCGGGCTCCGCGTCACCACCATCAAGATTGACCCATACCTCAACACTGATGCTGGAACCATGTCTCCGTTCGAGCATGGTGAGGTCTTCGTTTTGGACGATGGTGGAGAGGTGGACTTGGACCTTGGAAATTACGAACGTTTTCTGGACATCAAATTGACCCGTGATAACAACATAACCACGGGAAAAATATATCAGTCAGTCATTAACAAAGAAAGGAGAGGAGACTACTTGGGGAAAACCATTCAGGTTGTGCCACATATTACAGATGAAATTCAAGATTGGATTGAACGTGTAGCGATGAATCCGGTCGATGGTAAAGAAGGACCTCCTGATGTTTGTGTCATAGAACTTGGTGGCACCATAGGGGATATTGAATCAATGCCCTTTATTGAAGCATTAGGTCAATTTTCCTACCGTGTTGGACCTGGAAACTTCTGTCTGGTCCATGTCAGTCTTGTTCCAGTTTTAAATGTAGTTGGTGAACAGAAAACTAAACCTACCCAGCATAGTGTTCGTGGGCTAAGAGGCCTTGGATTGGCACCTGACATTTTAGCATGTCGCAGTACCGAGCCACTGGAAGAAAACGTGAAAGCAAAGCTCTCACAATTTTGTCACGTTCCAGTCTCAAGTATTATTAATCTCCATGACGTTACAAACATTTGGCACATCCCCTTGTTGCTAAGGGACCAAAGGGCCCATGAAGCTATTCTGAAAGTTCTAGACCTTCAATTTGTCGGTAAAGTACCACGAGAACCCAAGTTGGTTGAATGGACCGAAAGAGCCAGCAAGTTTGACAAGTTGAAGGCTACGGTTAAGATTGCGATGGTTGGAAAATATACTGGGCTGTCCGATTCCTACCTGTCTGTTCTAAAGGCACTTTTGCATGCATCGGTTGCTATGGGAAGAAAGCTTGTAGTGGAGTGGGTTCCTTCCTGTGATCTTGAAGATTCTGCAGCCAAAGAGACCCCTGAAGCCCATAAAAAAGCATGGAAGCTACTCAAGGGTGCAGAGGGTATACTTGTCCCTGGAGGCTTTGGAGATAGAGGTGTTCAGGGAAAAATTCTTGCTGCAAAATATGCACGAGAAAATAATGTTCCTTATCTCGGCATTTGCTTGGGTATGCAAATTGCAGTGATTGATTTTGCCTGTTCTATCATGAAATTACCGGGTGCAAATAGCACAGAGTTTGACCCAGATACAATGTCACCCTGCGTCATTTTCATGCCAGAGGGTTCCAAAACCCATATGGGGGCAACTATGCGGCTTGGATCAAGGAGAACATATTTCCATGCCACTGCATGCAAATCTGCAAAGCTGTATGGTAATGCTAGATTCGTAGACGAAAGACATCGACACAGATATGAGGTAAATCCTGAAATGGTACCAGAGTTTGAGAAGGCCGGACTTTCATTTGTTGGCAAGGATGAGAGTGGAAGACGCATGGAGATTATTGAACTACCCAGTCATAAATTTTTCATTGGAGTACAGTTCCATCCTGAATTCAAGTCAAGACCAGGGAAGCCATCTCCACTTTTCTTAGGATTAATAGCAGCAGCATCTGGACAACTAGAAACTTTGCTCCAACCAAGTTCCAACATTGTCAATCCAAATCCTATGCCCAGATTTCCCATTCCCAAAAAGACGATTTACCATGCCAAGAAGCCACTGGACAGCTTGGTAAACGGATACTTTGCAAATGGCAACGTCATCCACACTTGA</cdnaseq>

Protein Sequence

<aaseq>MKYVLVTGGVVSGLGKGVTASSIGVVLKACGLRVTTIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVINKERRGDYLGKTIQVVPHITDEIQDWIERVAMNPVDGKEGPPDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRGLRGLGLAPDILACRSTEPLEENVKAKLSQFCHVPVSSIINLHDVTNIWHIPLLLRDQRAHEAILKVLDLQFVGKVPREPKLVEWTERASKFDKLKATVKIAMVGKYTGLSDSYLSVLKALLHASVAMGRKLVVEWVPSCDLEDSAAKETPEAHKKAWKLLKGAEGILVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIDFACSIMKLPGANSTEFDPDTMSPCVIFMPEGSKTHMGATMRLGSRRTYFHATACKSAKLYGNARFVDERHRHRYEVNPEMVPEFEKAGLSFVGKDESGRRMEIIELPSHKFFIGVQFHPEFKSRPGKPSPLFLGLIAAASGQLETLLQPSSNIVNPNPMPRFPIPKKTIYHAKKPLDSLVNGYFANGNVIHT</aaseq>

Gene Sequence

<dnaseqindica>1..118#1411..1490#1686..1772#2459..2509#2594..2711#2881..2937#3028..3092#3567..3650#3754..3804#3887..3949#4029..4075#4168..4246#4378..4440#4774..4863#4945..4983#5067..5294#5385..5470#5563..5611#5699..5779#5872..5965#6401..6579#ATGAAGTACGTGCTGGTGACAGGAGGGGTGGTGAGCGGCCTCGGCAAGGGCGTGACCGCGAGCAGCATCGGCGTCGTGCTCAAGGCCTGCGGGCTCCGCGTCACCACCATCAAGATTGGTTAGCCATTGGTTCTTCTCCCCCTCCGTTTCGTTCATGCCCCGTCTTTTTTTTTGGGGGCATTTCTGGCGCGAGAATGGCCCGCCGCGAGCGTAGAAACCAACAAGGGCGGATTTATTTTCTTTTTCCCCGCGGAAAAGTTTGGATTTTTACGCCTTCCCTCGTCTCGATTGAAATTTGGAACCCACAGGGTTCAGAAAGGAATAGTACTACTACCTTGTTTTTGTCGTTGCAGTTGTGGAGCAAGTGTTGTTTTTGGGGAAAAGGAAGCAGCAGCATTCCCGAATACTTTGGGCGCTGTCTCCTGTCTGTGGCCGCGTGGCAACTGCCAGAGTGAACACGTTTGGTTGCTGGCGAGCTTATACATCGTGATGTTAATTAAGCTGGAAATTTTTCTACAAATTAAGCTGAAATTTGTCTAAAATATTATGCTGAAATAAAATGGGCTCAACGAGCGGCTTTGTGCAATGTTTGAGCTTTGAAGCTTTGATGTTCTTCCGACATGGCTGCTATGCACAACACAAGTGCATTTGGATGAACACTCACTCGTTTGTCTGTCAACACATTAAGCTTTTGCTTCTCTGTTCGTTATACATGGGTTCTTAGTTCTTACAGTTGTCTATTTCGCGCCATTTTAGCATTTCTTTGTCACTGCCTCTTGTTTTGAGCTACAGACGAGTTAATTATCGGCCGCTTGTACTTAATGTATATCTATTTTTGTTCTGTACATGTGAGCAGACAATCCTGAGTTTTCTACTCATCTGCATCACTATGTTAAACTTTGCATTTCCCCCCTAATTATATGCTTTTGGTGACTCAAGTTTTTCTCGGTGTTTCCATCCACTTTCTGCTCATTAAATATTTGTTTTTTTAGATTTTGGTTACTCGTTATTGTCTTGATGAAGTGGATATCTGATCTTGAGTTGGTGTCACAATCTTAGTTCCTTCAAAGAGACGAAATCTGAAGTTGTTGAAAGCAAGTTTGTCATCTCATCCATTTTTCCTGTAGCGTTTTTGAAGGAAGATATTCGTTTCTTTTCATTAAAACCGATATGTAACATATATTTTTGAGAAAACAATGGCTGAACCATCAACTTCTCCCATACCTCTAACACACTGAAGAAACCATTTACTCCGTACAAGATTTAGCTGCAAGGTCTTTATAGTACAAGAAGTTGGTGAACGCACTGAAGAAACCATTTAGTTCTCTAACTTCTGTTTCCTGAAGAGTCAATTAGTACCCCCTGCTCTCAATTTCTTACCTATTCTCATTTATGGCTACCCATCTGCAGACCCATACCTCAACACTGATGCTGGAACCATGTCTCCGTTCGAGCATGGTGAGGTCTTCGTTTTGGACGATGGTGGAGAGGTAACTAACTACAAGCCACCCAACGTCTCCCATTTTTGTGCCTCTCTTACCAGAAATTCCATGCTGTTGATGGATGACCATGGCAGTTTTCTGAACATATTTTCTTGTTGCACAGTTCCCATGCTTATTAAAAATGGGTTTTATGGATGTGATCTCTTTGGATAATTGGACTTTCTTTCCTCTTCTTTCTTGAAGGTGGACTTGGACCTTGGAAATTACGAACGTTTTCTGGACATCAAATTGACCCGTGATAACAACATAACCACGGGAAAAATATATCAGGTAACTGAATCTGATAGCCCTTGTCCATGCACAGTCGACAATTCTAATGAACATTGTGTAATCAAGTCAAAAAGTTTTGGTTTGTACTTCCTTTCTTAAGAAGCAGGAGAAAAGTTTTCCCCTTTTTTATACTAAAAAAATTGACAATAAGAAACCAGCATGGTTCATGGGTACCCGCCAGTTATATTGAACGTTTGATTGACTGAATGTGCATGGAGCCCACAAATCTTTATTGAGTCACTTTATGTTTCATCGTAAGATCCACTGCAGTACAATTATGCATGTGCAGAATCATCTGGGCCTCAGTCTGCCACTGTTGTCGGAAGCTACTGATAAGATTCAACCTGTCACATGGTGCTTAATTGTAGAGCCGATGCTTTGTTGGCTGCTTCTGTCATTTGCCAATAAATAATCTTTCTTCTACTGGTTACCTGAATTTTGTACAGGATGAAGATTAGACTAGGTAACTAGGTCTACAACAGTAAAAATACTGTTGAAACCCACCCTAGTAGCAGTTAGCTGTGTTGTTACCATGTAAGTTAGAGTAAATGTAATACAGCTCTTTTGATACGGTTTTTATGTGATTTTTTGTTGATGGTGCCTGTGAAATTCCTTTTTAACATCAACTCTAGCTGCTGATTTCATCCTCTGGAAGTTAATGGCATTTTTTTTAATGCTCAAACCAGTCAGTCATTAACAAAGAAAGGAGAGGAGACTACTTGGGGAAAACCATTCAGGTGTGTGACCAGTATGTGGTGGGAAGCTTTAATGTGAGAAATATCTATGTTTATTACTTAATTTGTCCATATTTTCCTTTTCAGGTTGTGCCACATATTACAGATGAAATTCAAGATTGGATTGAACGTGTAGCGATGAATCCGGTCGATGGTAAAGAAGGACCTCCTGATGTTTGTGTCATAGAACTTGGTGGCACCATAGGTAAAGAAAAAAACAATTCTATCTACTAAATCTGAAATCACAAAATCTTGTACTTCAAACACTCTAGTGTAGTTTATTTCTGCTCAAATGTTCCCAAAGTTGTGTAAGTATGCCGCTGCAGGGGACAAAATCTTTTCGTCGCATAATGACAGTGGCATTCTTGATGCAGGGGATATTGAATCAATGCCCTTTATTGAAGCATTAGGTCAATTTTCCTACCGTGTTGGTGAGAAAACAACTAAATCTTGCCTATATGTTTATTATGGTCTCGGTTTAGTTTCAGTTAACATTTTTCCTACGTCATTCTATGTTGTAGGACCTGGAAACTTCTGTCTGGTCCATGTCAGTCTTGTTCCAGTTTTAAATGTAGTTGGTGAACAGGTAAGTTCTGCTTATCTGAAACAACGAGACATATCAAACATATGAGAGGTTATAATATTTGCAGTTTATTAGGGTTCATGACACGTTTTTAATTATATTAAAAAACATACTTCCTGTTTCCTGTTAAGGATGGTGGTTGTGAGATTTTCAGTTAGTTGACCTTTTCTTTTTTTTTTTCTTTTCTTGGTTGATCTACATCTGGTTGGCTTGTAGATGGCTGTTTTCTCTAAACTCTAGTTTCTGAAAGTAACAATTTGCCTGAATTATAAAGTCTTAATCTTACCTACAGTTGTTTTCACAGAGTTGCTTCTTTTTTAAAAAAAAAAAAAAGAGGTGGCAAAAAGTAGAAACATAAACAAAAGAACTTTCAATGTACTGAAGTGTTGTTGAGCCTTTCAAAATAGTGTAACTGTTATGTGAACTCGCTGCAGTGTGATGTTCTCTTGCAAATGATGATTTTTTTTTCTCATGTAGAAAACTAAACCTACCCAGCATAGTGTTCGTGGGCTAAGAGGCCTTGGATTGGCACCTGACATTTTAGCATGTCGCAGTACCGAGGTACATTATCTAGTCATTTTTTTTTCATTCGTCAGAGCATTCAGTGGTTCATTTCCTTTTGTCCCAAAAATTGTTATATTGATCATCTCAATGCTTTTGACAGCCACTGGAAGAAAACGTGAAAGCAAAGCTCTCACAATTTTGTCACGTTCCAGTAAGGATAATTCTTGCGGTTTCAAGGTTTCTTTTAGGTTTTATGTCTTAACTTCATGCTGACAATGCAACTTATGTTGCAGGTCTCAAGTATTATTAATCTCCATGACGTTACAAACATTTGGCACATCCCCTTGTTGCTAAGGGTATAATACGCCTATGTTGCAATGCATATATTCAAGTTTTGCATGTTGCATATTTAATCATCTGCAATGGATCTTGTAGGACCAAAGGGCCCATGAAGCTATTCTGAAAGTTCTAGACCTTCAATTGTATGTATTTTCCATGGTTATGTAATAAGTTCATTCATCAGTTCAATGCCTCAAAAAGAAATTCTGATGGCTTCCTTCGTTCATGTATGCAGTGTCGGTAAAGTACCACGAGAACCCAAGTTGGTTGAATGGACCGAAAGAGCCAGCAAGTTTGACAAGTTGAAGGCTACGGTATATATATATTTATTTGTTCACTTCATGTTATTATTGTTGTTATTGGGGTCTTAGTAGAGTTTTACCACTTAGTTTTTTTTTTGTCAAAATTTTTGTTGAAAACTGATCATTACTGTGCAATGTTCCAGGTTAAGATTGCGATGGTTGGAAAATATACTGGGCTGTCCGATTCCTACCTGTCTGTTCTAAAGGTCAAGTTACTAATAAATGCACTTGTATTTGCATCCAAGATCAGCATGATTCTTAATTTGAATTTTCTAGATGATAACTAGATAGACATGACTCGACACTTGATTACAAATAGTAAAACGATACTAAGCTAAAAGCATTTAAGTTTATTTAGATTGTATGCCTTTCCAATTCTTTAATTGTGATGTGAACTTATAACTTCATTGTAGGCATGTGCAGGTATTATAAATCATACATGCATGTCTTAAATGTTCAGCTGAATATGTGAGGTTACAAATATATGACAATATTGACTGTTCTTGTTCACTGATTTATCTTAATGACCCTTATTTCAGGCACTTTTGCATGCATCGGTTGCTATGGGAAGAAAGCTTGTAGTGGAGTGGGTTCCTTCCTGTGATCTTGAAGATTCTGCAGCCAAAGAGGTTAGTGCGGTTTGGACTTCAGTGATTTTGTTTTCCTCAATGTAGTTCCTACTAATGTCTTGGATATGTTTATTTGTACAGACCCCTGAAGCCCATAAAAAAGCATGGAAGCTACTCAAGGTTAACACAGTTTACATACTCGAATGGCCCCTTGAATTTTTGATAAGTTATGCTCAGCCATTTGAAGAAAATTTACATTTCAGGGTGCAGAGGGTATACTTGTCCCTGGAGGCTTTGGAGATAGAGGTGTTCAGGGAAAAATTCTTGCTGCAAAATATGCACGAGAAAATAATGTTCCTTATCTCGGCATTTGCTTGGGTATGCAAATTGCAGTGATTGATTTTGCCTGTTCTATCATGAAATTACCGGGTGCAAATAGCACAGAGTTTGACCCAGATACAATGTCACCCTGCGTCATTTTCATGCCAGAGGTAGATTACATTCCCTTTACAGTTTTGGTAACTATTACTATCTATTAAGCATCAGCATTGATCCATATAATTTGCATAACTATTACGTAGGGTTCCAAAACCCATATGGGGGCAACTATGCGGCTTGGATCAAGGAGAACATATTTCCATGCCACTGCATGCAAATCTGCAAAGCTGTAAGATAATAATCCTGGACTTCTTTGCTTGTGTTTTGTATATTGTGCATTTGATGTTTACTATGGATAAATAATGGGATGCATTATCTTAGGTATGGTAATGCTAGATTCGTAGACGAAAGACATCGACACAGATATGAGGTTAGCCAAACAAAAAAAATTCATTCATAGATCATTCCATGTTCCCATTCTTCACTGTATAACAGTGAAGACTTCACTGTTTTTCAGGTAAATCCTGAAATGGTACCAGAGTTTGAGAAGGCCGGACTTTCATTTGTTGGCAAGGATGAGAGTGGAAGACGCATGGAGGTAGAATTGGAAAACAGTTGCTTCAATCTTCACAAAAAGTCTATGCAAAAACATTTTGTATTACTTAACATATGATGCTCTACTCTATGCAGATTATTGAACTACCCAGTCATAAATTTTTCATTGGAGTACAGTTCCATCCTGAATTCAAGTCAAGACCAGGGAAGCCATCTCCACTTTTCTTAGGTAATGCAGTTTTACTCAGACAAATATTCTGATGCTTCTGCTTGCATCTACTGTGTTATGACATCAATTTGTATGAGGATGAAGCTGATGAATGATCGATTTATTTATAGGAAAGAATAAACGTTACATATTATAAACCTAACAAATAGCTTAGAATAAGTGGTCTAAGCAATGTGAATACAAAGTTTTTGGAGACATTGTAATTTTGGAAGCATGGCAAGGATAATCGCAAATAATCTCAGCCAGAACGGGGTCTTAACCTCTACTATGATGCTTGTGTAGTGATGTACCAAATATGGCCAAGGAACATTGTTTTCAGTTTCATATTCACTGCGGTTGTTCATTTCGATTCTCCATGATTGACTTTATTCTGTATATGAAAGGTGCAGGCAAAAGCTCCTCCTTTTTGAACTAACATTGCATCTCTGCTAACAGGATTAATAGCAGCAGCATCTGGACAACTAGAAACTTTGCTCCAACCAAGTTCCAACATTGTCAATCCAAATCCTATGCCCAGATTTCCCATTCCCAAAAAGACGATTTACCATGCCAAGAAGCCACTGGACAGCTTGGTAAACGGATACTTTGCAAATGGCAACGTCATCCACACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004131