BGIOSGA004256

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Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004256| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004256, complete gene.| tag = OsI_033...")
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Gene Name

BGIOSGA004256

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004256, complete gene.

LocusTag

OsI_03371

Ensembl Transcript ID

BGIOSGA004256-TA

Ensembl Protein ID

BGIOSGA004256-PA

Length

3098

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32054275..32057372

Sequence Coding Region

32054275..32054328,32054745..32054882,32055000..32055137,32055343..32055486,32055708..32055818
,32055903..32056044,32056110..32056420,32056698..32056859,32057113..32057187
,32057277..32057372

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32054275..32057372 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32054275..32057372 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTGTACACTTGACATGACAGCAGACCTTGACATAGTAGCATCACATAGGATATTGTCTTTACTTCCTCCTTACGAAGGAAAATCAGTACTGGAACTTGGTGCTGGAATAGGTCGCTTCACTGGAGAACTAGTGAAAACAGCTGGGCATGTTCTTGCAATGGATTTCATTGAAAGTGTGATTAAGAAGAATGAAAGCATAAACGGTCACCACAAGAATGCATCCTTTATGTGTGCGGATGTCACATGTCCAGACCTGATGATTGAGGATAACTCCATTGATCTGATATTTTCAAACTGGTTACTGATGTATCTTTCAGACGAGGAGGTTGAGAAGCTAGTAAAGAGAATGGTAAGATGGCTAAAGGTTGGTGGCTATATCTTCTTTAGGGAATCTTGTTTCCATCAGTCTGGAGATTCAAAAAGGAAAGTGAATCCTACACATTACCGGGAGCCAAGGTTTTACACTAAGGTGTTTAAAGAGTGTCAAGCTCTTGATCAAGATGGGAATTCCTTTGAACTCTCTGTACTTACTTGCAAGTGTGTTGGAGCTTACGTGAAAAGCAAGAAAAATCAAAACCAGATATGTTGGCTATGGCAAAAGGTTGATTCAACAGAAGATCGGGGGTTTCAAAGATTTTTGGACAATGTGCAGTACAAAGCCAGTGGAATATTACGCTATGAACGCATCTTTGGAGAAGGCTTTGTGAGCACTGGTGGAATTGTATGCCTATTCTTTTATCTTCGTTCACCAGAAACTACAAAAGAATTTGTGGACAGGCTGGATCTCAAACCTGGCCAGAACGTTCTTGATGTTGGATGTGGAATTGGGGGCGGTGATTTTTATATGGCTGACAAGTATGATGTTCATGTTGTTGGTATTGATCTTTCGATAAACATGGTTTCTTTTGCACTTGAGCGTGCTATTGGGCGTAAGTGCTCAGTTGAGTTTGAAGTCGCTGATTGCACCAAAAAGACATACCCAGACAACACGTTTGACGTCATCTACAGTCGTGATACTATCCTTCACATACAAGATAAACCCTCACTATTTAAAAGTTTCTTCAAGTGGCTCAAACCTGGGGGTAAGGTCCTAATTAGTGATTACTGCAAGTGCCCTGGGAAACCTTCAGAAGAGTTCGCAGCTTACATTAAGCAAAGGGGTTATGACCTTCACGACGTCAGGGCTTACGGACAGTTCCTCGATGTTCTAGAGAGGGAGCTTGCTAAAGTTGAAAAGAACAAAAACGAGTTCGTCTCTGATTTCAGCCAGGAGGACTACGACGCCATTGTGAATGGATGGAAGGCAAAACTTCAAAGGAGTTCTGCTGGTGAGCAGAGGTGGGGGCTGTTCATCGCGACCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MECTLDMTADLDIVASHRILSLLPPYEGKSVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCPDLMIEDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKVNPTHYREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDSTEDRGFQRFLDNVQYKASGILRYERIFGEGFVSTGGIVCLFFYLRSPETTKEFVDRLDLKPGQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYDLHDVRAYGQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKAKLQRSSAGEQRWGLFIATK</aaseq>

Gene Sequence

<dnaseqindica>1..54#471..608#726..863#1069..1212#1434..1544#1629..1770#1836..2146#2424..2585#2839..2913#3003..3098#ATGGAGTGTACACTTGACATGACAGCAGACCTTGACATAGTAGCATCACATAGGGTCCATATTACATAAGGTGTTTCTTAGGTAGACAGCTGAATTGTTGTCACTGTTTTACTTAAAGGAAAAATTCTGTTTTGCTGTTTCCTTTTTCCAGACTAGAAGATGATGCTAGACCTTTTACTTTAATGATCACAGACCTGTTTGCTGACTGTACAAAGTAAAACTCTTTTCACAAGAAAAATACCCACTTAAGAATTTTTGGGGACTGTACTCGCACGAGAATGTGTTACTGTAACTGTCAATAATACTACCATTAGCAGGTGAATGAGATTGTTCCCTCTCACTCAATTGTCACAGTAATTATTAACCTTTTTAAAATTAGCATAGTCACATTGATTAGACATGTTTTTTGGATGCTGGAAAATGTTTTCCTGGACTTATGTTCTAACGTATCTCTTCTGACACTTCTGCAGATATTGTCTTTACTTCCTCCTTACGAAGGAAAATCAGTACTGGAACTTGGTGCTGGAATAGGTCGCTTCACTGGAGAACTAGTGAAAACAGCTGGGCATGTTCTTGCAATGGATTTCATTGAAAGTGTGATTAAGAAGGTTTAACATTCACATCTCATTTAAAACCAGTTTGGTAGCTGAACTATGATTGGCTTCTTTTATCTCTACATGAATGTTATGCCTGATTCATTTAGTCTTGTGTGTCGTTTCTTGTAGAATGAAAGCATAAACGGTCACCACAAGAATGCATCCTTTATGTGTGCGGATGTCACATGTCCAGACCTGATGATTGAGGATAACTCCATTGATCTGATATTTTCAAACTGGTTACTGATGTATCTTTCAGACGAGGAGGTAATGAGCAGATAGTACTTAATAGGCCTCATATCGTGTCTCATTTCAAATAAATAAGCATATTTAAGATCTGTTGCGATCCTTCTTTGCACATCTGAATATGTCTTAGGAAATGAACCCTGGATGATATAAATCGACTTTGTGTTGAAACTTGGTATGTCTTGGCTATATCTTCTGAGTTTGCTAACTCATACTGTTACTGTAGGTTGAGAAGCTAGTAAAGAGAATGGTAAGATGGCTAAAGGTTGGTGGCTATATCTTCTTTAGGGAATCTTGTTTCCATCAGTCTGGAGATTCAAAAAGGAAAGTGAATCCTACACATTACCGGGAGCCAAGGTTTTACACTAAGGTCAGTATGCTAACTATCTTGTTTCTGGTTCCCTTCTATCATTTGAATCTCAAGCTTGACAGTTCAAGGTTTTCTACTAGACTTGCCTCGTTAAATGTTACCCACTTTACTGAATCTAAACTATATACACAGTATGCTTATAGCAGCACTGAGCAATGTTATTTGCGCTACTTTGTAACAAGTTGTGATGATTGAAGGCTAACAGATTGATTTAAAAATAGGTGTTTAAAGAGTGTCAAGCTCTTGATCAAGATGGGAATTCCTTTGAACTCTCTGTACTTACTTGCAAGTGTGTTGGAGCTTACGTGAAAAGCAAGAAAAATCAAAACCAGGTACTTCTTTGTCCTTGCACATCCACATACACACTCATGTCCTGTGATCAAGTGAACTGATGGACTTGATGCCATACTATGCAGATATGTTGGCTATGGCAAAAGGTTGATTCAACAGAAGATCGGGGGTTTCAAAGATTTTTGGACAATGTGCAGTACAAAGCCAGTGGAATATTACGCTATGAACGCATCTTTGGAGAAGGCTTTGTGAGCACTGGTGGAATTGGTTAGTAAATGCATGTATTTTGTCATTTTTAAATCAGTAATATTCTAATTTGTTCTAATTTGTAGTATGCCTATTCTTTTATCTTCGTTCACCAGAAACTACAAAAGAATTTGTGGACAGGCTGGATCTCAAACCTGGCCAGAACGTTCTTGATGTTGGATGTGGAATTGGGGGCGGTGATTTTTATATGGCTGACAAGTATGATGTTCATGTTGTTGGTATTGATCTTTCGATAAACATGGTTTCTTTTGCACTTGAGCGTGCTATTGGGCGTAAGTGCTCAGTTGAGTTTGAAGTCGCTGATTGCACCAAAAAGACATACCCAGACAACACGTTTGACGTCATCTACAGTCGTGATACTATCCTTCACATACAAGTACGTTTTACACATTATTTACAACCCATTTGGATGTTTTGTTTCTTCCTGGTTTATTGCTCTACAGCCTACAACAGTTTAAATATTTTCAGCTTGAAATGGACTGTTTTAGGCAAGCCCTGAGAACCTGTATATACATTTGTAGTAATTGTTAGTGGGATTGTGGGAAAAATAAATTCTTGGAACTATTTGAATTACCTGCCACTAAATATGTTTTACCCTTTCTTTGATGCCAGAACAACTGTGTTTTGACCAGTGCTGTTTTTGCTCTTTGCAGGATAAACCCTCACTATTTAAAAGTTTCTTCAAGTGGCTCAAACCTGGGGGTAAGGTCCTAATTAGTGATTACTGCAAGTGCCCTGGGAAACCTTCAGAAGAGTTCGCAGCTTACATTAAGCAAAGGGGTTATGACCTTCACGACGTCAGGGCTTACGGACAGGTGCTTTTGCTAGCTACACTCTATATGATTAATAGTACTGTTTCTTTCATGAAAGTGTAGAGCTATGGTAACATCTGTTTGGTAAATTATCCAGATGCTTGAGAATGCTGGTTTCCATGATGTCATTGCTGAAGACCGCACCGATCAGGCAATCCCCCTCTGGCGCTACACTGGCTGCATTCCCATATTCTCTTCAACTGAAATGTAGATATGATTTTCTGTGGTACTGATCATATTCAATCTTGTATTGCAGTTCCTCGATGTTCTAGAGAGGGAGCTTGCTAAAGTTGAAAAGAACAAAAACGAGTTCGTCTCTGATTTCAGCCAGGTAATTTAGGCAAAACTGCGAGTTTAGTAGCTGCCTTCTTTCCATGTTGCTGGTATGCACATCAAATTCTTTGTTTCACTTATTTTCAGGAGGACTACGACGCCATTGTGAATGGATGGAAGGCAAAACTTCAAAGGAGTTCTGCTGGTGAGCAGAGGTGGGGGCTGTTCATCGCGACCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004256

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004256&oldid=41980"