BGIOSGA004271

From RiceWiki
Revision as of 11:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004271| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004271, complete gene.| tag = OsI_034...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004271

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004271, complete gene.

LocusTag

OsI_03404

Ensembl Transcript ID

BGIOSGA004271-TA

Ensembl Protein ID

BGIOSGA004271-PA

Length

1000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32273536..32274535

Sequence Coding Region

32273536..32274062,32274160..32274267,32274439..32274535

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32273536..32274535 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32273536..32274535 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCGTGTGTGTTTCTGATGCTGTGGTGTGTGGGTGCAGTGGATGTGAGCGAGGACTCCATGGAGAGCTCCGAGGAGATGGTGACGCCGAGGGCCGCCGCGTCCGAGGCGGACGAGGAGGAGAGGAAGGCCGCCACGTCGGAGGTGCCCGTGGAGGTGGTCGAGGCCGGGGAGGAGGTCATGGTGGACGCCTTGCCGCCCGAAGCCGCCGCAGGTGCGCAGGAGCAACAGGGTAAGGCGGAGGCGCTTGTGGTGGTGCAGGAACCGGAGGTGAAGCGCGAGGAGTTGGTGGCCAAGGTGCATCCGATGCATGACCCGGAACCGCAGGGCGAGGAGGTGCTCGTCGTGGAGGCGGCTGCGGTATCCGCGGTGCAAGAACCGGAGGTGAAGCGCGATGAGGTGGTGGTCATGGAGACGGCTGCGCCGCCTGCGGTGCAGGAATCGGAGACGAAGAGCGGTGGGGTGTTGGTCAATGGATGTGGTGGAGGTGTCACTGGTCTCTGGGTGCAGCTGATACTACAGAGGTGGCCCGGGGACCTGCAGTGGCTGTGGCTGCAGCAGGGCAGCGGGCAACATGGTGGAATTGCTGTGGGGTATTTGATGCGTTCTCTGGTTCGGAGAGATAGATTAAGGACTATTTCGATGTTTGTTAATATAAGCACCGGGCCTGATTTCTTTTGTAGGAATGAAGGTGGTACTATAGCTGCGTTTATGCCTTTTTATTCATGA</cdnaseq>

Protein Sequence

<aaseq>MDACVFLMLWCVGAVDVSEDSMESSEEMVTPRAAASEADEEERKAATSEVPVEVVEAGEEVMVDALPPEAAAGAQEQQGKAEALVVVQEPEVKREELVAKVHPMHDPEPQGEEVLVVEAAAVSAVQEPEVKRDEVVVMETAAPPAVQESETKSGGVLVNGCGGGVTGLWVQLILQRWPGDLQWLWLQQGSGQHGGIAVGYLMRSLVRRDRLRTISMFVNISTGPDFFCRNEGGTIAAFMPFYS</aaseq>

Gene Sequence

<dnaseqindica>1..527#625..732#904..1000#ATGGATGCGTGTGTGTTTCTGATGCTGTGGTGTGTGGGTGCAGTGGATGTGAGCGAGGACTCCATGGAGAGCTCCGAGGAGATGGTGACGCCGAGGGCCGCCGCGTCCGAGGCGGACGAGGAGGAGAGGAAGGCCGCCACGTCGGAGGTGCCCGTGGAGGTGGTCGAGGCCGGGGAGGAGGTCATGGTGGACGCCTTGCCGCCCGAAGCCGCCGCAGGTGCGCAGGAGCAACAGGGTAAGGCGGAGGCGCTTGTGGTGGTGCAGGAACCGGAGGTGAAGCGCGAGGAGTTGGTGGCCAAGGTGCATCCGATGCATGACCCGGAACCGCAGGGCGAGGAGGTGCTCGTCGTGGAGGCGGCTGCGGTATCCGCGGTGCAAGAACCGGAGGTGAAGCGCGATGAGGTGGTGGTCATGGAGACGGCTGCGCCGCCTGCGGTGCAGGAATCGGAGACGAAGAGCGGTGGGGTGTTGGTCAATGGATGTGGTGGAGGTGTCACTGGTCTCTGGGTGCAGCTGATACTACAGAGGTATTACTGTTCGCGATCGAGTGCTATGCCATCGGTCCCCATGTTTTGAAATCGAGAGGTCTCATTTGGTTCATTATTTTTTCCCTTATGATTGCAGGTGGCCCGGGGACCTGCAGTGGCTGTGGCTGCAGCAGGGCAGCGGGCAACATGGTGGAATTGCTGTGGGGTATTTGATGCGTTCTCTGGTTCGGAGAGATAGATTAAGGTCTGTATCGCTGTATCATGGTTTATCTTTTTTTTTTTATGATGATGATGCTTTGTGGAAAGAATATATCATTACCATTACTGTTAGATGTCATTGGGGAGGCTTAAAATAACAGATATTTTACTAAATTGTTTGTTTCTTTTAATTTTCTGTCCTTTGCTCATGCTCTAGGACTATTTCGATGTTTGTTAATATAAGCACCGGGCCTGATTTCTTTTGTAGGAATGAAGGTGGTACTATAGCTGCGTTTATGCCTTTTTATTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004271