BGIOSGA004294

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Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004294| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004294, complete gene.| tag = OsI_034...")
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Gene Name

BGIOSGA004294

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004294, complete gene.

LocusTag

OsI_03443

Ensembl Transcript ID

BGIOSGA004294-TA

Ensembl Protein ID

BGIOSGA004294-PA

Length

5111

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32549642..32554752

Sequence Coding Region

32549642..32549953,32550191..32550376,32550466..32550630,32550894..32550971,32551115..32551225
,32551308..32551388,32551474..32551524,32552539..32552568,32552696..32552782
,32552903..32553052,32553144..32553199,32553301..32553568,32553662..32553826
,32553916..32554005,32554209..32554388,32554657..32554752

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32549642..32554752 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32549642..32554752 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACATCGAGGACGGCTGGCGCCGGCTAGCGGCCGGGTTCGAGAAACTGTTGCGCATTCTCGACGGGGAGGAAATGCTATCCTTCTCGGGTGCCGAGTACAGTGAGCTTCTCCAGTATGGAACGCTGTTCTTCTCGACTTCCTTTTGCTTTTTTCTGTTCTCTTTGGGGTTTAATCTAACACACATTGACATGGGGCGTCTTCCGCGGCGTAGGATCACATATAAACTGTGTTACGAGAGTCCTGCCGGTCACGCCGCGGAGATGTATGATCGGTGGGATAAGACAATCAGGCATCACATCGTTTATCAGGTGCTACCGTCCCTCCAGGATATGCAGGGAGAGCCCCTTTTAAAGAACTTCGTTCATGACTGGGAAAACCACAAGGTGTTGATGAAATGGCTCAAATCCGTCTGCATGTACTTGCGATTGGCATTCACTAATCAGAGGTCACTTCCACCTATAATGGATATTGGTCTGAATTTGTTCAAGAACGTGGTTTTCGAAGAGTTAAATAAGAAAATGACACAAATCATCATCGAAATGGTAATATCTTCCTCCTGCTTGTTTCGTTTTCTGACCGATTGTCCAAGATGCATAAAAGGATGTTACAATGGTGCTGGTGCATTGATTTACCAGATTGAGGAGGACAGGGCAGGGAAGGTGATAAAATCTATACAAGAGGAAGAGGAAAGGATCCAAAATTATTTGAAGCCATGGACTGAGGCAAGACTGTCAAAGACAGTACTCCTGGAATTAGTATCCAGGCAAGCTGAATGGCTACTTGATGATGATAAATCAGGTTTTAGAGGTATCCTTGCGGCAGAAAATGATCTGCTAGATGATGGAAAGGGTAACGAACTGAACTTGATGTTCAGAGTTTTCTCCAGGATTTCTGGTGGTTTATTGTCAATGGCCATAGCCTTCCAGCAACATATTAGGGACATCCTGCAACAGGCAGTTGGTGCTGCACACATGGAAAAGGGTAAGGAACCATCAAATTCAATTGTAGAGGTATTTGTATTGAGAATCATGAAGGTTCTTCAAAAATACGAAGCGCATGTGATCAATAATTTTGACAATCACATTTTGTTTCGCAAGGCCCTGGATGAGAACTTTAGGATGATCTGCAACAGAAACATTGCTGATTTTAGTGATGGGGAATTTTTCATAATATTCCTTGAGAGACTCATTGAACAACGTACATGTGGCAAGCTAGACGATGACTCTGTTGAAGATACCCTTGCAAAGGTCGTTAAGCTTCTACCGTACCTGCACAGTAAGGATTACCTTGTTGAGCTGTACAGGAACAGGCTCTTAGGAAGACTATCCATTGGTTGCAACATTGAGGTCGAGACAAGCTTTATCACAAAGCTAAAACTAGTCTTGGACGTCTCAATCCTGGAAGATATGCTAGAAGATTATTCAATTTCAAAAGAACTACAAAAATTCTTCAAAGACTATATGAGCATGAACCCAGAATCAAATACTCTGGTGGACATGGACACAATGGTTCTGAAACAGGGTCATTTTCCTTCTCAACAAAAACAGCATTTATCGCTCCCCCCTGATATGCTCAATTGTGCTGAAGCTTTCGAGAAGTTCTATCAAGAGTTTCATGGACAAGCGACAGGAAATAGGAGGGGTAGAACGCTTACCTGGATCTATTCCCTTGGAAATTGCAATATTGTTGGAAACTTTGAAGGCAAATCAGTTGAGATGATTGTCTCACCAATGCAGGCTGCATTGCTGCTGCTATTCAATGAAGATGATCGATTAAGTTATAATGACATTGTGGCTAAGTTGGAAATCATGGACAATGATGCAAAAGTACCGCTTCATCATGTTGACAGGGGTGATTTCCGTGCCAGTGAGACCATGGAAGATGTCAGGAGGTACCGGAAGCAAAATGTCGATTGCGCAATTGTGCGTATAATGAAGGATAGGAAGACATTGGATCATGAGAAACTCGTGGAGGAATGCAAGAAGTTGTGTGATCCTTATTTCAAGGTCGATGACGACCTCATACAAATGAGGATCGATCATCTTGTAGCCGAAAATTATCTTGCTCGCAAGGAGGGGTGTACGTACGAATACTTGCCGTAG</cdnaseq>

Protein Sequence

<aaseq>MDIEDGWRRLAAGFEKLLRILDGEEMLSFSGAEYSELLQYGTLFFSTSFCFFLFSLGFNLTHIDMGRLPRRRITYKLCYESPAGHAAEMYDRWDKTIRHHIVYQVLPSLQDMQGEPLLKNFVHDWENHKVLMKWLKSVCMYLRLAFTNQRSLPPIMDIGLNLFKNVVFEELNKKMTQIIIEMVISSSCLFRFLTDCPRCIKGCYNGAGALIYQIEEDRAGKVIKSIQEEEERIQNYLKPWTEARLSKTVLLELVSRQAEWLLDDDKSGFRGILAAENDLLDDGKGNELNLMFRVFSRISGGLLSMAIAFQQHIRDILQQAVGAAHMEKGKEPSNSIVEVFVLRIMKVLQKYEAHVINNFDNHILFRKALDENFRMICNRNIADFSDGEFFIIFLERLIEQRTCGKLDDDSVEDTLAKVVKLLPYLHSKDYLVELYRNRLLGRLSIGCNIEVETSFITKLKLVLDVSILEDMLEDYSISKELQKFFKDYMSMNPESNTLVDMDTMVLKQGHFPSQQKQHLSLPPDMLNCAEAFEKFYQEFHGQATGNRRGRTLTWIYSLGNCNIVGNFEGKSVEMIVSPMQAALLLLFNEDDRLSYNDIVAKLEIMDNDAKVPLHHVDRGDFRASETMEDVRRYRKQNVDCAIVRIMKDRKTLDHEKLVEECKKLCDPYFKVDDDLIQMRIDHLVAENYLARKEGCTYEYLP</aaseq>

Gene Sequence

<dnaseqindica>1..312#550..735#825..989#1253..1330#1474..1584#1667..1747#1833..1883#2898..2927#3055..3141#3262..3411#3503..3558#3660..3927#4021..4185#4275..4364#4568..4747#5016..5111#ATGGACATCGAGGACGGCTGGCGCCGGCTAGCGGCCGGGTTCGAGAAACTGTTGCGCATTCTCGACGGGGAGGAAATGCTATCCTTCTCGGGTGCCGAGTACAGTGAGCTTCTCCAGTATGGAACGCTGTTCTTCTCGACTTCCTTTTGCTTTTTTCTGTTCTCTTTGGGGTTTAATCTAACACACATTGACATGGGGCGTCTTCCGCGGCGTAGGATCACATATAAACTGTGTTACGAGAGTCCTGCCGGTCACGCCGCGGAGATGTATGATCGGTGGGATAAGACAATCAGGCATCACATCGTTTATCAGGTATGTGCCGCCTTTTCCGGTTCCCCCTGCCCCCGCGATTATCATCAATTTTTATTCTGCGCACCTAATCAATGTGTGAAGTATTCTCAGTTGCATCGATCGATATCTGTTAATCTGTTCCCAACCTGCTTAGCTTGTGTTTGATGCATCCTGCAGTTGCCCTTAGCTAATACCTGTGTGAGAGAACGCTCGCTGTTGATATCTTTATGTTCATGTCTTTGTTACCTGATCATGCAGGTGCTACCGTCCCTCCAGGATATGCAGGGAGAGCCCCTTTTAAAGAACTTCGTTCATGACTGGGAAAACCACAAGGTGTTGATGAAATGGCTCAAATCCGTCTGCATGTACTTGCGATTGGCATTCACTAATCAGAGGTCACTTCCACCTATAATGGATATTGGTCTGAATTTGTTCAAGAACGTGGTAAGAAGCATATTCTGAAGTTTACACGTGTATTCTGCTGTGCAAAAGATTTCAGCTAAACCCATGCTGCCTACTGCCCTTGGTTGTAGGTTTTCGAAGAGTTAAATAAGAAAATGACACAAATCATCATCGAAATGGTAATATCTTCCTCCTGCTTGTTTCGTTTTCTGACCGATTGTCCAAGATGCATAAAAGGATGTTACAATGGTGCTGGTGCATTGATTTACCAGATTGAGGAGGACAGGGCAGGGAAGGTTATGGATTGCAATTTGATCAAGATGACTCTCAGTGTCTAAGCTGAACTTGGTAGAGGTGGTAATGGAATGGATGTTTATGAAGGTTTCGAAGAAGTGTTCCTCAAAAACACAGCAGAACATTACAGAAGAAAGGCCCAAGCTTGGGTGTCCCGTGGTTCTTGTTCTAAATATTTGGTCAAGGTATCTACGTTAAGTCCTTGCAATATTCTCTGTAATCTAGCATACCACTTATTCTTTGTCATGAGTTTTATGTTCTGCAGGTGATAAAATCTATACAAGAGGAAGAGGAAAGGATCCAAAATTATTTGAAGCCATGGACTGAGGCAAGACTGTCAAAGGTTTGTGATAGGTTTATTTATTTTCCCATTTCTTCTGTGCATTTGTTAGCTTGTTTTCTTCACAAGTCTGTTTTATCATGTACGCATTCATCGCCTGCTCAGTTGGAATTTAACTTCCAACCCGTTACATTGAATACTTACAGACAGTACTCCTGGAATTAGTATCCAGGCAAGCTGAATGGCTACTTGATGATGATAAATCAGGTTTTAGAGGTATCCTTGCGGCAGAAAATGATCTGCTAGATGATGGAAAGGTTTGATAGAAAGAGACCAAAGCCTTACTATATGAGCAAATATGTAGAATCAGTTTAAATGAATATGTCTTTCTTACTACAGGGTAACGAACTGAACTTGATGTTCAGAGTTTTCTCCAGGATTTCTGGTGGTTTATTGTCAATGGCCATAGCCTTCCAGCAAGTAAGCTATACTTCACATTATGCTAATGATATCTATTTCTTTGTCAAGATCAGTGACCTTAATATGTTACTTTTGTACACTGCAGCATATTAGGGACATCCTGCAACAGGCAGTTGGTGCTGCACACATGGAAAAGGTGATGCATCTTGTGCTCGCACATTGTACTTCATATCCATTCTTGTTTCAACTTCATGTGGCCTTTTCCGTGATGGATGATTTCTGTTGCTAGTTTCATGTTCCTTGTATTGGTGTTCTGAACATCCAAATTTCAATAGCTTGACGTGTAAAATAATTGTGAAGATTTCAGTTGTGTGTAACATAATCATCAATCTTATCTTGATAACCCACTGACTGATCTATGATATTTTTCTTGTAAGTTGAAACTTTCCCCTTATTATTTAATTTCAAATTTGTCCGGCGAAAAATTAATTTCAAATTCTTTAAATGTGTTTAATATGAAGTGGGAGCACCTATATGATAACACATATTGCTTTTATCGTATGAAACAGAGCATGAACCTTACCATATGTTGTTTTATGTTCTGTTTTGTTTTCTTACTTAATACATCCTTGCATATTGTATTCTTTTCTATACCTTGTTAAACAGTGTATTGCATGTTTAGCCGTCTTTGAGACTAACTGCTAAAGAGCATAATTATCACAAGATTCCACACCTATTGGCACATACTAACGCGATGGATTTACTAAAAAAAAAGTACATGATGGACATACAAAAAAAAATGATAAGATAAAAAAGAACTAGATGTTATGAAAATAAGCTTTTTAAAGTTTGGATAAACCTCTACTCTAACCTAGGTAAATATGACTTAAGAGATATTGCTTGTTCTCCCTGTAAGAGTTGTCATATATCATTGTTCTGCTACTGCTATTACCATAAAAGTAATTTACTTGATTGTTTTACGTGTTAGTTGTTTTGTTTTTGGAAAACAGAGGGAGGCTCTCTATTTCATTTATTGATACCAAAGTGACAGTTTTGCCAGTTAGTTCGCTACTTAGCTTGTGTTTTACTTAACATAATTCTTCTATCTTAATATATGCAACAATCATGTTAGCCACCAGTTTATTATGATTTATATGCGCCACTTTTTTGCAATGAAATAACATATTATTTTGTTTTGTGCAATCCACAGGGTAAGGAACCATCAAATTCAATTGTAGAGGTCAGCATTTGTAGAATCCTGGTTTAAACGGAACTCCCCCCTCCCCCCTCCCCTCCCCCCTCTCATGTGTGTGGGTGCTTGCACACGTCTTTAGGGGGATTACTGATGCATAGCATCTTGATTTTAGGTATTTGTATTGAGAATCATGAAGGTTCTTCAAAAATACGAAGCGCATGTGATCAATAATTTTGACAATCACATTTTGTTTCGCAAGGTTTGCTTGGTTGGAATGACTCAATAGTCAATACTTTGAACATTGCCTTAGATCATTGTAATTACTTGCTAAAACATGATAGTATGATGTTGGTTACTAGGGAATTCTGTCTTTGTGCAGGCCCTGGATGAGAACTTTAGGATGATCTGCAACAGAAACATTGCTGATTTTAGTGATGGGGAATTTTTCATAATATTCCTTGAGAGACTCATTGAACAACGTACATGTGGCAAGCTAGACGATGACTCTGTTGAAGATACCCTTGCAAAGGTATGCTACTACTGGCTTGTTTTTGCAATTCTAAAGCTCACATCCGTAGGCTTACGGAAACAATTTGCCAATGTGGATACTGAATTTTCAGGTCGTTAAGCTTCTACCGTACCTGCACAGTAAGGATTACCTTGTTGAGCTGTACAGGTTTGTGGTTGCTTCTTTAACTTGGGAGCTATGGTTGTTTGACTCCTTAGAAGACAACTGAAGTTTGAGGAATCCATTTTCCCCCTGAAAATGTATTGCAGGAACAGGCTCTTAGGAAGACTATCCATTGGTTGCAACATTGAGGTCGAGACAAGCTTTATCACAAAGCTAAAACTAGTCTTGGACGTCTCAATCCTGGAAGATATGCTAGAAGATTATTCAATTTCAAAAGAACTACAAAAATTCTTCAAAGACTATATGAGCATGAACCCAGAATCAAATACTCTGGTGGACATGGACACAATGGTTCTGAAACAGGGTCATTTTCCTTCTCAACAAAAACAGCATTTATCGCTCCCCCCTGATATGGTGCCTCTCTTAACCATTTTCTAGTTCATTATGGAGTTATTTTGGTTATCCATATTTCTAATAAGGTAAGATCTGAGATGTTCTTTTTCTCAGCTCAATTGTGCTGAAGCTTTCGAGAAGTTCTATCAAGAGTTTCATGGACAAGCGACAGGAAATAGGAGGGGTAGAACGCTTACCTGGATCTATTCCCTTGGAAATTGCAATATTGTTGGAAACTTTGAAGGCAAATCAGTTGAGATGATTGTCTCACCAATGCAGGTGAGTTCAAATCCCTTAAGTCTGAACACAGAGCCACGCCCACATGGGCTAAGCATGACCTTTTTATGCCGTTGATCTATTTTTGCCAGGCTGCATTGCTGCTGCTATTCAATGAAGATGATCGATTAAGTTATAATGACATTGTGGCTAAGTTGGAAATCATGGACAATGATGCAAAAGTAATGCTGTATTCTTTATCATGTGGAAAGTACAGCATCCTAAAAAAGGAGCCGAGAAACAAAACAATTGCTCCAGACGACATATTTGAGTTCAACAATAACTTCAGGTTAAAACGGGAAAGATAAAGGTGATCCTTTTGTAACCAGAACTTCTGTTAGCGCCTCTCTCTCTCTCTCTGAGGTGACTGTAATGTGTGCTGCAGGTACCGCTTCATCATGTTGACAGGGGTGATTTCCGTGCCAGTGAGACCATGGAAGATGTCAGGAGGTACCGGAAGCAAAATGTCGATTGCGCAATTGTGCGTATAATGAAGGATAGGAAGACATTGGATCATGAGAAACTCGTGGAGGAATGCAAGAAGTTGTGTGATCCTTATTTCAAGGTACTAACATACTACAGTATATCCTCCACTAAAGAATGCTTGTGGCAGTTTTCCTTAATTGCTTTCTGGCGCATTTTTTTTAGGCACGTCCTCTGGCCATATGTAGTGCAACTTCTGAAAAGATGTCCATTATTTGCATTTTTTTTTAGTCTGCACATGTGGTCGTTTTAGAGAACGAAACTGCTTGTGTAGAACAAAATTAGATTGATCTTTGGATTTTCTTTTAATTCATTTTTCTTTGTCGATGACGAAGTTTTCTTCGCTGCAGGTCGATGACGACCTCATACAAATGAGGATCGATCATCTTGTAGCCGAAAATTATCTTGCTCGCAAGGAGGGGTGTACGTACGAATACTTGCCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004294

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004294&oldid=42018"