BGIOSGA004308

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Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004308| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004308, complete gene.| tag = P0456F0...")
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Gene Name

BGIOSGA004308

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004308, complete gene.

LocusTag

P0456F08.15

Ensembl Transcript ID

BGIOSGA004308-TA

Ensembl Protein ID

BGIOSGA004308-PA

Length

5349

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32729990..32735338

Sequence Coding Region

32729990..32730111,32730845..32730908,32731088..32731174,32731551..32731613,32731860..32731925
,32732029..32732103,32732325..32732400,32732946..32733147,32733410..32733491
,32733595..32733668,32733817..32733928,32734034..32734108,32734261..32734322
,32735000..32735099,32735237..32735338

Genome Context

<gbrowseImage1> name=IndicaChromosome01:32729990..32735338 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:32729990..32735338 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGAGAAGGGGTCGAGGGCGGCGGTGGACGAGCGCTACGCGCAGTGGAAGTCGCTCATCCCGGTGCTCTACGACTGGTTCGCCAACCACAACCTCGTCTGGCCGTCCCTCTCCTGCCGGTGGGGACCCCAGTTTGAGAAGGCTACCTACAAGAATCGTCAGCGTCTTTACCTTTCAGAGCAGACGGATGGGACTGTCCCTAATACTCTGGTTATTGCAAATTGTGAAGTTGTCAAACCAAGGGTTGCAGCTGCTGAACATATATCTCAGTTCAATGAGGAAGCACGATCACCTTTTGTAAAGAAGTACAAGACTATAATTCATCCAGGCGAGGTGAACAGGATTAGGGAGCTTCCGCAGAACAGTAAGATCATTGCCACTCATACCGACAGCCCAGATGTTCTCATTTGGGATGTCGAGGCCCAGCCAAATAGACAAGCTCAACTGGCACAGATGGAGTCTCGTCCTGATTTGATATTAAGAGGACATAAGGATATTGCTGAGTTTGCGCTTGCTATGTGCCCAGCTGAGCCATATGTGTTATCTGGAGGAAAAGACAAATCTGTTGTATGGTGGAGCATCCAAGACCACATATCTGCACTGGGAGATTCCTCGAAAACTGAATCTTCTCCAGGGGCATCAGGAAGCAAGGGAAAAACTGCAAATGATAAGGATAGTCCTAAAGTTGATCCTCGTGGTATCTTTCTTGGCCACGACAGTACTGTTGAAGATGTCCAGTTCTGCCCTTCTAGTGCACAGGAGTTTTGTAGTGTGGGCGATGATTCTTGTCTTATTCTTTGGGATGCCCGGAGTGGTACAGGCCCAGCTGTTAAGGTTGAGAAAGCTCATGGTGGTGATGTTCATTGTGTTGACTGGAACCTCCATGATGTTAACTATATCTTAACTGGTTCTGCGGATAATTCTGTCCGTATGTGGGACCGGAGAAATCTGGGTTCTGGAGGAGCTGGCATTCCAGTTCACAAATTTGAGGGTCATAAAGCTGCTGTTCTTTGTGTTCAGTGGTCACCTGACAAGGCATCTGTATTTGGAAGCTCTGCGGAAGACGGTTTCTTAAATGTGTGGGATCATGAGAAGGTTGGAAATAAGAAAAATCCCAACGCACCTGCTGGGCTTTTCTTTCAACATGCTGGTCATAGGGATAAGATTGTAGACTTCCACTGGAATTCTTCGGATCCTTGGACTATTGTGAGTGTGTCTGATGATGGTGAGAGTACTGGTGGAGGTGGAACATTGCAGATATGGCGCATGAGTGACCTGATATACCGTCCAGAAGATGAAGTTCTTGCAGAGCTGGAGAACTTCAAGACTCACTTGGCCAGCTGTGCTCCAAGGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MKEKGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYLSEQTDGTVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRQAQLAQMESRPDLILRGHKDIAEFALAMCPAEPYVLSGGKDKSVVWWSIQDHISALGDSSKTESSPGASGSKGKTANDKDSPKVDPRGIFLGHDSTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGTGPAVKVEKAHGGDVHCVDWNLHDVNYILTGSADNSVRMWDRRNLGSGGAGIPVHKFEGHKAAVLCVQWSPDKASVFGSSAEDGFLNVWDHEKVGNKKNPNAPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQIWRMSDLIYRPEDEVLAELENFKTHLASCAPRS</aaseq>

Gene Sequence

<dnaseqindica>1..122#856..919#1099..1185#1562..1624#1871..1936#2040..2114#2336..2411#2957..3158#3421..3502#3606..3679#3828..3939#4045..4119#4272..4333#5011..5110#5248..5349#ATGAAGGAGAAGGGGTCGAGGGCGGCGGTGGACGAGCGCTACGCGCAGTGGAAGTCGCTCATCCCGGTGCTCTACGACTGGTTCGCCAACCACAACCTCGTCTGGCCGTCCCTCTCCTGCCGGTAAAATTCCCCGCATCTCCTCCCTTCCTTCCTCCCTTCCGGCGGTTTCCTGCGCGTCTCGTAGCCATCGTCCTCCGTGGAGATCCATTTCGGGCTAGGGTTTTTGGGGGACTGTATCTAGGGTTTTAGGGCGTGGCTCTGCTTCGGTGACTCCAGATCTGTCGCTTGCATGGTGATTTGGCGGGGATGGCAGTGGGGTGAGGATGTCCCGGCCCCGGTTGGGATGTTAGGGTTTTTGGGACGGGGAGGTTTTGTGGGATGCGACTGTTTGTTTGAGTTTGGTGGTGGTGGTGTGTGTGTTTTGGGGGGGGGGGGGGTGTGGGTCAGATTCTTCCGTGTTCATGTAATGCTTGCTGATGCGAGTCTCCCTTCGAGATTTTATGGCTAGTGGGTTGCTGTTCATCCATTTCTGTCTATATAGTCGATATAATAGGGTCGATTCTTCCGTGTTCATGTAATGCTTGCTGATGCGAGTCTCCCTTCGAGATTTTATGGCTACTGGGTTGCTGCTCGTCCATTTTTGTCTATATAGTATATAGTCGATAATATGATTACCTGTTATGTTTTAGAGTTAGATTGTCATGCTTTATCCGTGCCTGTTCTGTGTTGAGTTGTGACATATCATCTTGTAATTCGGTTTAAAGCTGTGCATGTTGGATTCTGTCGTGCTTTTGACCTTCAATAGTGGTTCTGCAACTAACGATTTGATCTTCTCATCATTAATTGTTAACAGGTGGGGACCCCAGTTTGAGAAGGCTACCTACAAGAATCGTCAGCGTCTTTACCTTTCAGAGCAGGCAAGTGCTCCCAAAATAAGTTGTTCTTTTTCTTTCTTTTGCTGTAGGGATGTTTTGAAGCTCAAATTTATGGTGAAGTTTGAATTCAGATATGCAGATGGGTCTTCTTAGCTAGAAAATTTATGTATTCTTAGTTGGATATTAAACTTTAGCATTTGCTAACCATGTGATTGTTGCAGACGGATGGGACTGTCCCTAATACTCTGGTTATTGCAAATTGTGAAGTTGTCAAACCAAGGGTTGCAGCTGCTGAACATATATCTCAGGTTTCCACTTTTTTCAGTGACCCATTTGAGTTTGTGAAATGCAGAATCATGCTACGTTTGAGATGAATGGACATAGCTGGTCCTTTTTGCAGATTTAATTGACCCGAGGTGTCAGCTTCCCATCTTAATGTAATCATTAATCAGAGATGTGGACCTGTAGTACCAACTGATAGTTTACTATGCCTAATCTGTCTTATTAAATTAATAAAAATGTCATAACTCGAACATCTAGATTTGCATGACTTCAGTCTTGTGATAATGGTGTATGAGACTGCCTTACATTGGCCTTAAAAAGACCTGAATTAGGAATTCCTTGCACTAACTTGAAGTCTGTTTACAATGAAACTGACCGGATGTCTCTTATTTTTTGTTGCAGTTCAATGAGGAAGCACGATCACCTTTTGTAAAGAAGTACAAGACTATAATTCATCCAGGCGAGGTACAAGCTCATTCAATCGTGATTGTTGATTTCTCTTTCCTTAACTTGAGGATCATTGCCTCTGTATGAGATCTTCCATGTTGTGTGGTGCATATATTGGCTATAAACTTTAGTGGTTTAGATGGCTTGCTTTTCTTTTGGAGATAGTGCTTGAGATGTGTCTTTTATTTGTTTAACCCCGTGTCCCCGTCAACATTTATTTAACCCAATCGTTGATGTATTGTTTCTGTTTTACCATGGACACAGGTGAACAGGATTAGGGAGCTTCCGCAGAACAGTAAGATCATTGCCACTCATACCGACAGCCCAGATGTATGCCTAGAACTTTGTAGTGCTGCCCGTTTCTTGTGATCATCAATCCCTAAGCATTTCTGTGATGGATTTGTAGACTGAAGGCTTTTTTGTTCATTTGCAGGTTCTCATTTGGGATGTCGAGGCCCAGCCAAATAGACAAGCTCAACTGGCACAGATGGAGTCTCGTCCTGATTTGGTACCACCTGACTCTCGCCCTGATTTGGTATCTTTTCTTATTTTCATTCTCAACCTATATCATTTTGAGAAGCTGAAATTGCAGCTTCATCTGGTGTATCTGCACACAAGTCCTAAGAAACTGTGTTATGGAATCATAGAATATATTGAAAGGTTTTCATCTTTCATAGTTCGAGTTCCCTTTTCACACTTGTGGCTTAGTAGCTTAAACTGTTTTGACAGATATTAAGAGGACATAAGGATATTGCTGAGTTTGCGCTTGCTATGTGCCCAGCTGAGCCATATGTGTTATCTGGAGGTTAGCAATATTTTGTCTTCTTGTATGTTTAAATCTTTCTAGTTTATACCCCTCACACCTTTTGTATTTATTCACATATTGTTCTGGTGTCAAGACTTTTTTGTGTGCGCATGTGTGTTATCCTTAACAATTACCCCTAAATTATTTTCCGGTTGATATTGTTGACTTTTCATGGTCTTCACCTCTTCAGTGTTCGATTTTGATGTGTGCAAGGGTCCTTGAAGTTGAGAACTGGCCTTGTTTTGTTCTGTTGGATCTTGTACATGTGAGTCAAGATAGGTCCATGCCTAAACTAGCTTGCAGATGGAGGTGACAGCACCATTTTAACGTGCAGAATAACAAAAAGAATAGAGGCCAATCACTAAATTAGGCATATTGATTACTATGTAAACCAGCTGCTAGCTAGCTTGGGTTTGGGCCTAACTTGAATCACTTGCTAAAGTTTATAGACTTGGAAGTTTTGTTGCCAAGTTCAGGGGACACGTTTTTTCTCTCGACTCAATGTGCTGCTGTGATAACTTGGACTTCAATACGAATTGTAATAGGAAAAGACAAATCTGTTGTATGGTGGAGCATCCAAGACCACATATCTGCACTGGGAGATTCCTCGAAAACTGAATCTTCTCCAGGGGCATCAGGAAGCAAGGGAAAAACTGCAAATGATAAGGATAGTCCTAAAGTTGATCCTCGTGGTATCTTTCTTGGCCACGACAGTACTGTTGAAGATGTCCAGTTCTGCCCTTCTAGGTATTGCACCTTCCCCTTCATGTTATTAAATGTTGTCTCTCTAGCATGTGTATATGTTGTTTGGACTATGAGCTTCAGTGGTTTGCATGGCCTAAAGTTTTTGTCTTGGCTAATAGTCGTTCTTTATGATGATAAAACAATAGCAGCTATCATTATTGTGAACATCTGCTGGGAACTTGGAATGCATGCTATATTTTGATATTGTATGATCTATACTTCTATCAATTTATCTTCACAGTTTATTTTTTTTTATTTTTTGAAGTGCACAGGAGTTTTGTAGTGTGGGCGATGATTCTTGTCTTATTCTTTGGGATGCCCGGAGTGGTACAGGCCCAGCTGTTAAGGTGGTGCTCTTCTCCATTTTAAGCAGATTAATGATGCTTTACGTGAAAATGAGCAGCTCAATTCTATGCACCATGTTGAAACTGGTTTATTCTTCATTTCCAGGTTGAGAAAGCTCATGGTGGTGATGTTCATTGTGTTGACTGGAACCTCCATGATGTTAACTATATCTTAACTGGGTATGATGGCATGAAATGTTTCTAAATTCTAAATAATATGTAACATGTTCTTTAGTGTTCATTTGGTACAAGAAGCCGTGGATACACTTCTTGATAGTGGGTTTAGCTATTTACACATTTGAGTAAGATGGTTTCTTTTCGTATTCAGTTCTGCGGATAATTCTGTCCGTATGTGGGACCGGAGAAATCTGGGTTCTGGAGGAGCTGGCATTCCAGTTCACAAATTTGAGGGTCATAAAGCTGCTGTTCTTTGTGTTCAGGCATGTACAGATATTTATTGTTACTATATTTTTTATGCACATTTGGTTACTGTCGTTTATTTTTTTTGTGCCTTTATGCTATAATTCAAACCTTGTGTGTTTCAGTGGTCACCTGACAAGGCATCTGTATTTGGAAGCTCTGCGGAAGACGGTTTCTTAAATGTGTGGGATCATGAGAAGGTATCTTTCTATACAATTCGTTACCATTTCAGTCATCTCTGTCATGGCCCTGCAGAAAGTTTGGAATTGGGATGGGAGTTCATGCTCCATTTGTCCCCTTCATTTCATGTACTTTTTAATAGCTTTAGATTCATAAAATTCTTTTGATGCAGGTTGGAAATAAGAAAAATCCCAACGCACCTGCTGGGCTTTTCTTTCAACATGCTGGTCATAGGTATGCTATCGTCTGATGAAATGTAAAATTTTCCTTATGTGTTGTAATATGCGTAACTCAATACCATATTCCTTCAAATGCTTAATACCACATCAGTTGGCTTTTTATTCCTGTCACATTTACGAGACATTCGTTTTTACGACAACTTTAGGTTGCATCACTGTGCACTGCTTTTCTGTTTCTGCAATGAGATATTTTTCCTAAGATATTTTCATTAATTAGTTTTGCAAAATTGAAGATGGGACTTGGATCCTCTTTGAACTGGTGTTTGACTTATGCTGAGAGACACTTGTGCAATTGCAAATTTGAACTTAAGAAGCCTAAGACTTAAGGGATAAATCTTGATTATGGTGTACTCTGTATCTTAGTTGGTAAGGCCATTATAAAGTCAGCCTGTGCTTTCTCCACCTTTGGAATAACTGTTATGGTTCAGAACAAATGGATAATCAGTACATTTGTAAGTAGATCATATTTCAGTTTTTCAATAGATTTATGCTACAGCATATGCATACAATGTTAGCTCTTTTTAGTTTCCACATGAACTGGGCACTATAATAAATTGAGGGGAAGATGTATTAGATCTTAAGGAATGATACAACTGTTATCAAAATGATTGCTGTTGATTTTCATTGTATGTATTCCATAAATAACGTATTTTGTGATATTTTTATTGGCAGGGATAAGATTGTAGACTTCCACTGGAATTCTTCGGATCCTTGGACTATTGTGAGTGTGTCTGATGATGGTGAGAGTACTGGTGGAGGTGGAACATTGCAGGTGTGTTTCTTTATTTTTATAGTGCCAGACACAAAATGGGACTGTACTCATATTTCATTGGAATAGTGACTGCTACCATGTTGTCTTTTATCTGATATTATACGTCAGTTATTCTTATGCATATTTTATTTGTGTAGATATGGCGCATGAGTGACCTGATATACCGTCCAGAAGATGAAGTTCTTGCAGAGCTGGAGAACTTCAAGACTCACTTGGCCAGCTGTGCTCCAAGGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004308

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004308&oldid=42032"