BGIOSGA004334

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Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004334| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004334, complete gene.| tag = P0683B1...")
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Gene Name

BGIOSGA004334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004334, complete gene.

LocusTag

P0683B11.13

Ensembl Transcript ID

BGIOSGA004334-TA

Ensembl Protein ID

BGIOSGA004334-PA

Length

4843

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33050050..33054892

Sequence Coding Region

33050050..33050346,33051393..33052671,33053893..33054128,33054251..33054892

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33050050..33054892 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33050050..33054892 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCCACGCCCACCACGTCCGCCTCCGCGGCGGCCACCACTCGCCTCTTCCTACCTACTCGCCGCCACCTCCATGAAACCGCTTCCGTGCCTGCCCCTTCGCGCACCATCGCCCGCCGCTACTCCGGCGGCGTCCGCTCTCTCGGGCCACCGCGCGCCGCCGCGGGCGAGCGTGGCGGCGGGGCCGGCGGAACCATCACCGGGAAGGGCGCCGTCCGCATAGTCTCCATAGTAGGCGACGGGAGCATCAGCCCGCTGAAGGACACGCCATGGGAGGAGGTTATGCGCCACACGGCTAATAGGATGAAGTGGGTTGACGAAGGATTTGAAATGCTTGTCTTCACAGACAAGTCAATTGGCCATGATGAACTTAGGAAAGAGCTGGCACAGTGTGATATGCTAGTCAATGTTGCAATAACGAGTCAGGAGACTGTTCAGTGGCTTATAAATAACAGTGAGGACATTCCCAATATAATCTGCTTTCAATCATCTCCAACCTTAGAAAACAAGTTAGGTGGCAGGTATGTTCAATACACTGGACGTCAGGACATGTTTTGCAAGCTAACAAATATTGGAGAAACAGGTGGCATGAAGGAATCTGCTGAAGTCCTTAAGGCTGTATCTAATGCCTGGGAAAGGCATAATTCAGATGACATTAGATTTTGCTTACTTGTTGTGGTTAATGCGTACATAAGACCTGTTGATATGCTGCAAAACCTTAGGGCAAAAGGTCTGTCTACCCTAAGCTGTATGATAAGAAATTGTGGTCCTCAGATACTGAATTGTCTGTTCGATCCCAACTGTAGGAAAGCCCTTCAGTGTTTAAATTCATGTTCTCCAACTGATCAAGTTTGCAACTATCGCTGCATTGCGTCGTATGAGAGTCCGCATCTGGAGGCCTTTTCTTTATGTGTTTTGCAGAAGAACAATTGTCTTGATCTCAATGCCGAGATCCCCAGTAAGCCCTCTGTACCCCCACTAACCATGTTCAGAGAACAAATGCTAAGCCATGAACTTGCAGAAGACATGTTTGTTGGATGGTTGGACAACTTGGAATGGAGTTGGAGAGTTGTAGCTGGACAAAATCCAGCATATGATCAATTCCCATGTCAGTATCAATTATTTTACAGGGGAAAAGCTAAAGGTTCATTTTGGTATGAGCCAATTTTTCAAGTCAGAACCCTGGAAGGGGAACTGGTTTGGAGGCGCAGAAAGTACCGAGTAAGAAGAGCTCTCATCCCTGGTACATTTTACTTCAGTGTGCTGGATAATGGTGTGGTTTCAAAGGAGTTTTGGACAATCGTTGATGTTTCAGATGATTTCAGCTGGGGTCTGTTCCATTATCACGGAGCCGCTCAGGCCGCTGGACTAGCATACACTGGAGCAGTGCTCGTTAGCCCAGATGGCTCTTGTCCAGATTTGGATGACCCAAGACTGGCATCTGCTTTAGATAAGTGTGGGATCAAGAAGTGGGAGCTTTATATGGTTGATAACTGTTCCTGCACTGGTGCACCTTTGGGAACTCCTGGAGATGCAAAGCTGCATTATCAGATTGCTCCTGGAAAAGAATCAGATCCACCCCAACAATTCGCGCTCTTCACAGTCCAGGACTGGAGCTGTGGTCCGGTGGAGGTTATAGAGAAGAAGCAGAGAGCAAGAATGGCTGGGCTGTATGAGAGACCGTCGGAGACGTACACCAAGAAGCGGCCTCGGTACCCTGACGCTTGGTTCTCCAAGCTCGCCGCCCTCACCGCCGGCCACCACCGCGCCTGGGACGCCGGCTGCGGCACCGGCCAGGCCTCCATCAGCATCGCGGAGCACTACGACAGCGTGGTCGCGACGGACGCGAGCGAGGGGCAGATCCGCCACGCCGTCGCGCACCCCAAGGTGCGGTACCTGCACACCCCGGTGGACCTCTCCGAGGACGACCTCGTCGCCATGGTCGGCGGCGAGGGCTCGCTGGACCTCGTCGTGGTGGCGACCTCCATCCACTGGTTCGACATCCCGCTCTTCTACGCCGTGGCCAACCGCGTCCTCAAGAGGCCCGGCGGCGTCCTCGCGGTGTGGGGCTACAACTACGAGATCCACCCGTTCGAGGACAAGCTGCACGGGCAGCTGTACCCGGCCATGCGCCCGTATATGGACCCGAGGACGAGGCTGGCCATGGACAGGTACCGCGACCTGCCGTTCCCGTTCGAGCCCGTCGGCGTGGGCCGCGAGGGCGAGCCGGCCGACGTCGACATAGAGGTGGACATGACGCTGGACGACCTCGTCGGGTTCCTGAAGACCGGCTCCGTCGTGACGACGGCGAGGGAGAAGGGAGTAGACCTGGAGGCGGTGACCAAGGACGTGATGAAGGGGGTGGAGGCGGAGTGGGGAGACCCGGCGGTGGCGAGGAAGCTCGTGTTCAAGGCCTTCATGCTCGCCGGGAAGCCCAAAGTGCTGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAATPTTSASAAATTRLFLPTRRHLHETASVPAPSRTIARRYSGGVRSLGPPRAAAGERGGGAGGTITGKGAVRIVSIVGDGSISPLKDTPWEEVMRHTANRMKWVDEGFEMLVFTDKSIGHDELRKELAQCDMLVNVAITSQETVQWLINNSEDIPNIICFQSSPTLENKLGGRYVQYTGRQDMFCKLTNIGETGGMKESAEVLKAVSNAWERHNSDDIRFCLLVVVNAYIRPVDMLQNLRAKGLSTLSCMIRNCGPQILNCLFDPNCRKALQCLNSCSPTDQVCNYRCIASYESPHLEAFSLCVLQKNNCLDLNAEIPSKPSVPPLTMFREQMLSHELAEDMFVGWLDNLEWSWRVVAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPIFQVRTLEGELVWRRRKYRVRRALIPGTFYFSVLDNGVVSKEFWTIVDVSDDFSWGLFHYHGAAQAAGLAYTGAVLVSPDGSCPDLDDPRLASALDKCGIKKWELYMVDNCSCTGAPLGTPGDAKLHYQIAPGKESDPPQQFALFTVQDWSCGPVEVIEKKQRARMAGLYERPSETYTKKRPRYPDAWFSKLAALTAGHHRAWDAGCGTGQASISIAEHYDSVVATDASEGQIRHAVAHPKVRYLHTPVDLSEDDLVAMVGGEGSLDLVVVATSIHWFDIPLFYAVANRVLKRPGGVLAVWGYNYEIHPFEDKLHGQLYPAMRPYMDPRTRLAMDRYRDLPFPFEPVGVGREGEPADVDIEVDMTLDDLVGFLKTGSVVTTAREKGVDLEAVTKDVMKGVEAEWGDPAVARKLVFKAFMLAGKPKVLN</aaseq>

Gene Sequence

<dnaseqindica>1..297#1344..2622#3844..4079#4202..4843#ATGGCAGCCACGCCCACCACGTCCGCCTCCGCGGCGGCCACCACTCGCCTCTTCCTACCTACTCGCCGCCACCTCCATGAAACCGCTTCCGTGCCTGCCCCTTCGCGCACCATCGCCCGCCGCTACTCCGGCGGCGTCCGCTCTCTCGGGCCACCGCGCGCCGCCGCGGGCGAGCGTGGCGGCGGGGCCGGCGGAACCATCACCGGGAAGGGCGCCGTCCGCATAGTCTCCATAGTAGGCGACGGGAGCATCAGCCCGCTGAAGGACACGCCATGGGAGGAGGTTATGCGCCACACGGTATGCCTCCGCTCTGAGCTCTGAACCTAGCACCGATTCACCGCTATCAAATGCTAGTGCGGAGTCGCAGTGCAAAGGAGTACTCGACAGTATTGCAATAAGCCGATTCGGAATATGCTGATAACTGAAGAACTTCTATAGATAGAATGTTGTAACGGCAAAGCACATGCAAATACGCGATTGGTCAATTGCACACTCACACAGAACCATTTCGCACGCTCACTTGGAGAACTAGTTGTAGAAGTATTCAAGTATATGTGATTATATGGGCACGAACATTCTAAATTTCTGGTACCTCCAAAATGTGTTAGTACTTAGTACTTGATTATAATTTTGTATCGCTTATTTTACCTTGTTTTAGTACTTGATTATAATTTTGTATCGCTTATTTTACCTTGTTTGCCTTGTGATTTAATAAACCTATCGATGCCACAATCTTAGATTCTGTAAGATGTGACGCTATACAATGCAAGTGTGGAATTTCTGTTCAAGTTTTGTGGATTGATATGTCCATATATGATACCATGGTTTGTGTAGGATTTACATAATTTCCATAATACAATTGTGTGTCATACCTGTGGGCTTATGAAAAGGGGCATGTGCGTGGAATCACCCAAAAAAAATCCGCACATATATTTCAGTCTTTCCTGGCCATCATTTATTTAGTGATAGTGTACAAAACTGCAACCCTTGCAGAGCCATTCATGGGAAATATGTTGTAAGTTGGTTTCCTTTGTTTTCCCATTTGTGGTCTTGTGGATGACGATCAAACCCAAGATGCCACTCATGTGAACTCAATCTAATATAGTAGTATCATCGAAATTGTTTAACTTTTTGTTTTTTGAGTTAGCATGCACATAAGGAAAAACATGTAGAGTCCAAGCTTATTTGTGCATCTGAGGATTACAAGATAACACATTTGTTCATTCAGAAAGCAAGAAACAGGTCCTCTGATTTATTGTCGTACTTAATATGAATATGCAGAATATCTCTCTGCATAAATTTACTGCCAGTAACCATGCATCTCGTTTTTTCTGTCTTTTTAGGCTAATAGGATGAAGTGGGTTGACGAAGGATTTGAAATGCTTGTCTTCACAGACAAGTCAATTGGCCATGATGAACTTAGGAAAGAGCTGGCACAGTGTGATATGCTAGTCAATGTTGCAATAACGAGTCAGGAGACTGTTCAGTGGCTTATAAATAACAGTGAGGACATTCCCAATATAATCTGCTTTCAATCATCTCCAACCTTAGAAAACAAGTTAGGTGGCAGGTATGTTCAATACACTGGACGTCAGGACATGTTTTGCAAGCTAACAAATATTGGAGAAACAGGTGGCATGAAGGAATCTGCTGAAGTCCTTAAGGCTGTATCTAATGCCTGGGAAAGGCATAATTCAGATGACATTAGATTTTGCTTACTTGTTGTGGTTAATGCGTACATAAGACCTGTTGATATGCTGCAAAACCTTAGGGCAAAAGGTCTGTCTACCCTAAGCTGTATGATAAGAAATTGTGGTCCTCAGATACTGAATTGTCTGTTCGATCCCAACTGTAGGAAAGCCCTTCAGTGTTTAAATTCATGTTCTCCAACTGATCAAGTTTGCAACTATCGCTGCATTGCGTCGTATGAGAGTCCGCATCTGGAGGCCTTTTCTTTATGTGTTTTGCAGAAGAACAATTGTCTTGATCTCAATGCCGAGATCCCCAGTAAGCCCTCTGTACCCCCACTAACCATGTTCAGAGAACAAATGCTAAGCCATGAACTTGCAGAAGACATGTTTGTTGGATGGTTGGACAACTTGGAATGGAGTTGGAGAGTTGTAGCTGGACAAAATCCAGCATATGATCAATTCCCATGTCAGTATCAATTATTTTACAGGGGAAAAGCTAAAGGTTCATTTTGGTATGAGCCAATTTTTCAAGTCAGAACCCTGGAAGGGGAACTGGTTTGGAGGCGCAGAAAGTACCGAGTAAGAAGAGCTCTCATCCCTGGTACATTTTACTTCAGTGTGCTGGATAATGGTGTGGTTTCAAAGGAGTTTTGGACAATCGTTGATGTTTCAGATGATTTCAGCTGGGGTCTGTTCCATTATCACGGAGCCGCTCAGGCCGCTGGACTAGCATACACTGGAGCAGTGCTCGTTAGCCCAGATGGCTCTTGTCCAGATTTGGATGACCCAAGACTGGCATCTGCTTTAGATAAGTGTGGGATCAAGAAGTGGGAGCTTTATATGGTTGATAACTGTTCCTGCACTGGTGCACCTTTGGGAACTCCTGGAGATGCAAAGCTGCATTATCAGATTGCTCCTGGAAAAGAATCAGGTATTTTGCAGACAGGGTGATGTGTTCTAACGGCACAGAAGGTTCCCAGATGACTTGCACGGTTGCACCTCTAAGTCAGGCAGTGTGGACTGTGGTCTGTGGATACTGCGGACTTGATCCAGTGCAGGAATTGCTTGCACTGTTGCACCCACTAGACTACAAATATGTAAGAATAACATTCAGGTATCGCTGAAAAGAGTAATTATGTAAAATGAGCGGTTCTAATGTCATGCCTTTTTTACTGTCACCATGTCTTCAAGTGCTAACAAATAAATCGGACTTAACCCTTATCTAAAAGAACAAATAAGACACGGTTAAATACTTAAGTGTATTTGGTTAAATATTGCTGTACCTAAGCTAAATATTTACATGTAGTGACCAAGGCACTTACCTAAACCTCCAAACCTCAGCTGAAGTTGGCAGAGGCACACCTCCAGTCCCTGCATATGCTGTGCCAGTCTAAAATTCCCAGTCACAGACTCTGGAATTCCCATGTTATTGTTGTATAGTTGTCTTGTTATTCAGAATCCTCTATTTCCTAAGTTGTAGCGTTATTATAGTAGGTTGCAACACTCTGATTTGTGCAGAGATGTTTATATCCATGCTGATGAAACCAAAGATATCTGTTTTTACTGTGAAGATGTAATCAAGACCTTACCGTAAAAGCCTTCATCTGGCAGATGATCCATGTTATAAAGCATCTTATTGTTTTCCCATATACGGCTGCTGAAGCATCTTTCTGGGTTCAGTTAGTTCAGCACAGGACTAATGTGGAGGGCCATCTTAGCCACAAATCGAAGTAAGCAACTTGCCCACGTCTGGTTGACTTGCAAGACCCAGGCTATTTTTCAATCTACAGGTTTCAGATTGCTATTCCTGTCTTTACCTCATCTTTCTACAATCCACATCTTTCAGATTTGATGCATTGCCTGTTTTTACCTACCTTTTACCCCATATTTTTCCTTGTCCTGTTAGCAGCATGCTTCTACTTTCCTGATTGCCTTTGAAAATTATTTTATCTTTGTGCATAATTTTCGTTGCAGCAGTTTCAGCATGTGGTGGTGTACTATTAGGAGGAGAAAAATGGTGTAACCGCCACTAGAATACACTAGTGGATAATGCAAATGCAAAGTTGTTCACTGAGATGGATCAGATGACAACTGCTGATTTTGACTTTGACTCTGAATCTGTCATCTTCGGTGATCTATAAATTCCATCCAGATCCACCCCAACAATTCGCGCTCTTCACAGTCCAGGACTGGAGCTGTGGTCCGGTGGAGGTTATAGAGAAGAAGCAGAGAGCAAGAATGGCTGGGCTGTATGAGAGACCGTCGGAGACGTACACCAAGAAGCGGCCTCGGTACCCTGACGCTTGGTTCTCCAAGCTCGCCGCCCTCACCGCCGGCCACCACCGCGCCTGGGACGCCGGCTGCGGCACCGGCCAGGCCTCCATCAGCGTAAGCGCCCAATCTCTGAACCACTCTCGCCGCTTCATCATCTTCTGAACTCTGAAAAAAAACGAAACATTTCGCCGGCGATCGACCGTCTTTATCATCAGTGTTTCTCCGTGTGCGTTCAGATCGCGGAGCACTACGACAGCGTGGTCGCGACGGACGCGAGCGAGGGGCAGATCCGCCACGCCGTCGCGCACCCCAAGGTGCGGTACCTGCACACCCCGGTGGACCTCTCCGAGGACGACCTCGTCGCCATGGTCGGCGGCGAGGGCTCGCTGGACCTCGTCGTGGTGGCGACCTCCATCCACTGGTTCGACATCCCGCTCTTCTACGCCGTGGCCAACCGCGTCCTCAAGAGGCCCGGCGGCGTCCTCGCGGTGTGGGGCTACAACTACGAGATCCACCCGTTCGAGGACAAGCTGCACGGGCAGCTGTACCCGGCCATGCGCCCGTATATGGACCCGAGGACGAGGCTGGCCATGGACAGGTACCGCGACCTGCCGTTCCCGTTCGAGCCCGTCGGCGTGGGCCGCGAGGGCGAGCCGGCCGACGTCGACATAGAGGTGGACATGACGCTGGACGACCTCGTCGGGTTCCTGAAGACCGGCTCCGTCGTGACGACGGCGAGGGAGAAGGGAGTAGACCTGGAGGCGGTGACCAAGGACGTGATGAAGGGGGTGGAGGCGGAGTGGGGAGACCCGGCGGTGGCGAGGAAGCTCGTGTTCAAGGCCTTCATGCTCGCCGGGAAGCCCAAAGTGCTGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004334