BGIOSGA004338

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Revision as of 11:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004338| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004338, complete gene.| tag = P0480C0...")
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Gene Name

BGIOSGA004338

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004338, complete gene.

LocusTag

P0480C01.3

Ensembl Transcript ID

BGIOSGA004338-TA

Ensembl Protein ID

BGIOSGA004338-PA

Length

2649

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33105428..33108076

Sequence Coding Region

33105428..33105771,33106650..33106950,33107047..33107342,33107447..33107733,33107847..33108076

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33105428..33108076 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33105428..33108076 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATAGGATGGCATAGGTCACAGAGCCTGGCGTCTGCAGGGCTCGGGCTGCACGTCCTCCTCTGCTCGTCGTTGCTGCTCAACGCCGTCTTCATCGCGCACCAATTCCTCGGGGCCTCACCGCCGGCAACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCACTGCAGGCGGCCAAGGAGGCCGAGGACGTGGCCGCCGTCGACTGCTCCGGCCACGGGAGCGTGTTCCTGGATGGCGTCACCGGCGAGGACGGGCGGCCGGGGTGCGAGTGCAACAGCTGCTTCTCCGGTCCGGACTGCTCCGTCCGAATCCCCAACTGCGCCGCCGACGGTCAAGGCGGGGACCCGTTGTTCCTGGAGCCGTATTGGAAGCGCCACGCCGCGGCCAGCGCCGTGGTGTTCTCCGGGTGGCATCGCTTGAGCTACATCACCACCGATGGCCACTTAAAGTCCGTTGAGCTCGATCGGCAGATCCGGCGGCTCCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGACCGGCTCCACCCACCTGATCAACGCGCTGGTGTACGCGCTCTCCCCGGAAGGCAACGCCGCCTCGCTGCCGGCCAGCGTCGTCGCCACCGTGCCGTATTTCGCGATGTACAAGTCACAGACCGTCATGTTCGACGGCCGGGAGTACAGATGGGACGGGACAACCGCTGCGTGGGCAAACAACAACAGCTCACGGAACCCCACCAGGGGTTTCATTGAGTTCGTCACCTCGCCGAACAACCCCGACAGCACGTTGCACGAGCCCATCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCACGTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATGCCACCCCAGTACTGCACTTACTTCAACCGGATCAAAGAACCATCGCCAGCCTACGCTTGGGTGAAATGCGAGTGGGTGGAAGACGACGACTGCTACGAGACGCTGCTGGCAGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCGGCACTCGGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGGAGAGGATCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGCTCCATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAIGWHRSQSLASAGLGLHVLLCSSLLLNAVFIAHQFLGASPPATPERLGDGLSWALQAAKEAEDVAAVDCSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQGGDPLFLEPYWKRHAAASAVVFSGWHRLSYITTDGHLKSVELDRQIRRLHRAVGNAVVDDKYLVFGTGSTHLINALVYALSPEGNAASLPASVVATVPYFAMYKSQTVMFDGREYRWDGTTAAWANNNSSRNPTRGFIEFVTSPNNPDSTLHEPILAGSSAIVDHAYYWPHLTHIPAPADEDVMLFTTSKLSGHAGSRFGWALVRDEKVASRAISYIEESTVGTSRETQLRVLKILKVILANLHGKEDIFAFGYDVMSSRWRRLNAVVSRSTRISLQKMPPQYCTYFNRIKEPSPAYAWVKCEWVEDDDCYETLLAAGINSLTGTVNEAGTRYTRLSLIKTQDDFDMLLERITEFVDAEKHGRAPAASSSM</aaseq>

Gene Sequence

<dnaseqindica>1..344#1223..1523#1620..1915#2020..2306#2420..2649#ATGGCGATAGGATGGCATAGGTCACAGAGCCTGGCGTCTGCAGGGCTCGGGCTGCACGTCCTCCTCTGCTCGTCGTTGCTGCTCAACGCCGTCTTCATCGCGCACCAATTCCTCGGGGCCTCACCGCCGGCAACGCCGGAGCGGCTCGGCGACGGGCTGAGCTGGGCACTGCAGGCGGCCAAGGAGGCCGAGGACGTGGCCGCCGTCGACTGCTCCGGCCACGGGAGCGTGTTCCTGGATGGCGTCACCGGCGAGGACGGGCGGCCGGGGTGCGAGTGCAACAGCTGCTTCTCCGGTCCGGACTGCTCCGTCCGAATCCCCAACTGCGCCGCCGACGGTCAAGGGTAATGACTGGCCTCTCCTCGCTTGCTCGTGCTCTTGCGCGCTGCTCCACAACGCCTTGCATGCACGCAGCTTCCCTCCTCTTTGTCTTTGGTGTGAAATACTTTTGAACTCTCGAGGGTATCGAGGACAGTTTGCACTTACATCACTCAAATAGTTATAAAAAAATCATAAAAATATCTAACACTGGTACAATATACATATAACACTTCATCACAAAATTTAAACATAAACTCAACTCACACATAAAAAAAAAGAGAGAAATTTCAACGTACAAACAATATAGTACTATTAATCTCTAAATTTGTCTTTTTTAAAAAAAACTACAAGTTAAACTTGAAATTGATTTTTGCTGAAGTGATAGATGTTACTATTTGTCTGTCCTATGTTATAAAAAAATAGATTTTTTTGGGAGTAGCTATATCTATGGCGCCATATTTTTCACCAAAAAATAGTCGGTATGTTTTTACATTGTAAGTCCTTAAATTACATATATAATTTTAGTGTATTTACAATGTAAGTCTCAAAATTATATATGTAAGTCCTAAAATTACGTATGTAAATCCTAAAATTACATACTAATTACATATCTAAGTGGTGTGTAACTACCGTGTAAATTTGTATAAAATATGAAAAGTGACATATTCATTGCAAGAAAACTGTCGATTAAGATATAACAATTCCGTATATAAAACCAACCGGAAGATCGGGTGGATACGGTTGCCGCAGCGTTTGCATGCGAACGAATCTAACATACTTGAAAACTGACTGAGATTAGTGAAAAAAACTGTCGCCATCTTTATAGCAATTCCGTTTTTTTTTTCACAACCATTAGTGTCCTGTCCTGATGGTGTGTTGTTGTTGCAATGGCTCTGTGCAGCGGGGACCCGTTGTTCCTGGAGCCGTATTGGAAGCGCCACGCCGCGGCCAGCGCCGTGGTGTTCTCCGGGTGGCATCGCTTGAGCTACATCACCACCGATGGCCACTTAAAGTCCGTTGAGCTCGATCGGCAGATCCGGCGGCTCCACAGGGCCGTCGGCAACGCGGTCGTCGACGACAAGTACTTGGTCTTCGGGACCGGCTCCACCCACCTGATCAACGCGCTGGTGTACGCGCTCTCCCCGGAAGGCAACGCCGCCTCGCTGCCGGCCAGCGTCGTCGCCACCGTGCCGTATTTCGCGGTCCGTGATCCCAACACCACTTCACGATGACACATCCTACGAGCATCTATACGCGACTTCACTAACTAGTTGTGTTGATCGATGATATGTATGTAGATGTACAAGTCACAGACCGTCATGTTCGACGGCCGGGAGTACAGATGGGACGGGACAACCGCTGCGTGGGCAAACAACAACAGCTCACGGAACCCCACCAGGGGTTTCATTGAGTTCGTCACCTCGCCGAACAACCCCGACAGCACGTTGCACGAGCCCATCCTCGCCGGCTCGTCGGCGATCGTCGACCACGCGTACTACTGGCCTCACCTGACGCACATCCCGGCGCCCGCCGACGAGGACGTCATGCTCTTCACCACGTCCAAGCTCTCCGGCCACGCCGGCAGCAGATTCGGGTACACACGGGCCACAGAGTTCCCAGCTGCATGCCATTTGCAAGCAAGACCGTACACAACGACACCAAAGCTGATCGATATACGCCGTGCCGTGCATTACGCAGGTGGGCGCTGGTAAGGGACGAGAAGGTCGCGAGCAGGGCGATATCCTACATCGAGGAGAGCACCGTGGGCACGTCCCGGGAGACCCAGCTCCGGGTGCTGAAGATCCTCAAGGTGATACTGGCCAACCTGCACGGCAAGGAGGACATCTTCGCCTTCGGCTACGACGTGATGAGCAGCCGATGGCGAAGGCTCAACGCCGTCGTGTCGCGGTCCACCCGGATCTCGCTGCAGAAGATGCCACCCCAGTACTGCACTTACTTCAACCGGATCAAAGAACCATCGCCAGGTTAAAACGGCACATTATCTCTGCAGATCATGGCATTTCAATTTCTCTCGCTACCTCTCAATCGAATTCTTTAAGGTGATGCGATGGCGTGTTTGGTCTACCCTGATCTGCAGCCTACGCTTGGGTGAAATGCGAGTGGGTGGAAGACGACGACTGCTACGAGACGCTGCTGGCAGCGGGGATCAACTCGCTTACCGGCACTGTTAACGAGGCCGGCACTCGGTACACGCGGCTGAGCCTCATCAAGACGCAGGACGACTTCGACATGCTCCTGGAGAGGATCACCGAATTTGTCGATGCCGAGAAGCACGGCAGAGCTCCCGCTGCCTCCAGCTCCATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004338