BGIOSGA004347

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Revision as of 11:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004347| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004347, complete gene.| tag = OsI_035...")
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Gene Name

BGIOSGA004347

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004347, complete gene.

LocusTag

OsI_03538

Ensembl Transcript ID

BGIOSGA004347-TA

Ensembl Protein ID

BGIOSGA004347-PA

Length

6717

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33222563..33229279

Sequence Coding Region

33222563..33223143,33223709..33223841,33223956..33224326,33224474..33224901,33224990..33225271
,33225761..33225929,33226863..33226976,33227622..33227662,33228031..33228167
,33228965..33229279

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33222563..33229279 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33222563..33229279 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGAGAAGGAGGAGGCGGAGGAGGAGGTGGAGGATGAGGAGGAGTACGAGAGCGACCTCGACGACGCGCCCCTACCGGCGGTGAGGCGACGTGCCGCGGCGAGCGACGACGAGGAGGGCGGCGGCGCGTCGGGTTCCTCGGCGCCGTGGAGCGTGGCGGGGTCGGACCTCGACTCCTACTCCGACTCCGACGGGCAGGGCGCCGCGGAGATGTACGACGACGAGGAGGAGGGGTCCGAGGAACGCGATGAGTTGGAGGCGGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGGGGAGGAGAGGCACTTGAGGACGAGGGGAAGTGCGCCGACGAAGAAGCGCTTGAGGACGAGGGGAGGTACGGCGACGAGGAAGCGGATGGCGTGGTCGCGGCACTTGGGGACGAGGGTAAGTGCGACGGTGAGGAGGCGGAGGTGGAAGCCGCGGTGGAAGGAGCGGAGGTGGTGAACAAGGAGGGCGAGGCCCAGGCCGTACCAACGATAGGCGCCTTCTACATGCACGATGACCGTTTCCGTGACCCGGAGAATGGCAGGCACGGGAGCCAAAGGAAAAATTTCGGTGGCCAAAAGTTATGGTATCCTAAAGATGATAACGTATGGGCGCATGATAGGTTTTATGAGATGAATTCCCATCATGATAGGCTTTATGAGACGAACTCCCATAACTCTCCAAATGACAGTGGAAGGGGACCAAGAGGCTCTTTTAGAGCATGGGGTGCGGATAGAACACATCGTTATGATCATGGCTATCTTGAAAGAACTTTATCCCAATCTTACTATCATGATGATAGAGAAGAGTACAAGTATGTCCCAAAGGAACGACGTACTTTCTTTGCTACCACCAGGGACCACATTAGCTTTCTGAAAGAATCCAACAATATGTATGGCAGTGCCAATAACTACAAAAGAGTTCCAAGTAAATTTCACACTTACTATGATCATGGTGATACCAAGAATTTTGCCTATGTTCAAAGAGAATCACATACCTATTATGGCAATGCTAAAGATTTCACCAGTGCACACGATGGTTACAGGGGGGGAGTTTCTAACCCATCTCAGAATGAAGAGGCTTCTTCCAATGCAGAAGGGGGAAAGCATCCCTCTCAAACTCTGGGTTTCCAAACTGAAAAAAACTTTCCCATGAAGCAAACTTCTCCATCAAACTTGAATTCAGCTTCACCATCCTTTTACCATTCTAGATCATCTCATCAGGAACAACCTTTTATTCAGAGAGGGAAAGCGCGAGCTGTGATGTTTAGTAAACTCTTCACATCCTCTGTCCGTATGGCTCATAATTCTCTGAAGCCACAATCGCGTCCTGTTTATAGAGTAAAGGCTGTTGTTCCATCTGGTAGAGGGAACACTCTTGATTCTCTTAGCACAAATGCTATGGAGGAAATTGATAATCCTGGCTCAAATTTATCTGGATCAGCATCAGACAACTACATCCAATATTCAAAATCCAGTGATAAAGGAACAGTTTATCAGGAAAGGTCAATTCATCGACCATTTCAATCCACATCAAGGGTGTCTACTCTGGTGTTTTGTCCGAAACCTCTCAGTACCACCCAAATTCAATCTCATGTGACAAGTTCAAATGAAGATACTGAGACAAGTATGTCCCCTGGTTTAGTCAATTCTTTAGTGTCATCTGCAGTGAAGACTGAGCTAAAAGAGGAGGTGGAGGGGCCCTCTTTTACTTATGATGAAGGTCATGTTCATGGTGTTACAGGAGCAAGGGGCCTTACACTCAGTGACAAAGGCACTCTATTATATGGACTTCCCAGTCTCATTTCTCTTTCCTCCACAGCTTTGCAGTTCAATGGACAACATCCTAGGGGACCTGATACCCCTTTCATTGGCAGGACTCTGCCTAGATTTGTGGTTCGACAACTAGTCGGTGGCAGTTCTGAAATGAATCAAATGACATGGCTGCTAGTATCGTCTAGTTCTACTGGGGCTCCTGGATCAACACATAATCCACCACATTTTGGCAGCTATTACCCCCAACCTTCTGAACTCGTGCCCTCATTGGTATCTCCAAGGGATCATAGTGTAACTGAAGATCTGACCCATGAAATACCAGAACTTGATTTGTTGCACATCCAGTTATATTGCCGCAAACTTCAGTGCCTTCTTAAGACCAAGTCCCAGACCAATCCCTTCAACAGCATCCTGTTCTCTAAAGCACTTATTTTTGTTCTGTATAGCAAGATACAGCAGCTGATTTTCTACCCTAGTCGCTCAACTACTCTCGAGCAAGGTCCCAGGTGTTCATCCGGCTGGACCATGCTGAGATTACTATATGGATTGGACGAAACGGGCAATGGAGAGAGGAAGCCCCTGGCCCCTGCTTCACCCTTTTCAGGCCCTCTTGCTCCTACATCCGTGATCCGTCCACTGTTGCCCCACCCTCCGAACATGTTCACGTCGTCGTCTGGTTCAAGACAAGGCAAAGAGAGCCCACCTGAGCTTGTGAGTTGCGAGGTGGTCACAGGCAGCACCAATGCTAATGCTGGTAGCTACGTAGACATCTGA</cdnaseq>

Protein Sequence

<aaseq>MAEKEEAEEEVEDEEEYESDLDDAPLPAVRRRAAASDDEEGGGASGSSAPWSVAGSDLDSYSDSDGQGAAEMYDDEEEGSEERDELEAGGGGGGGGGGGGVGGGEALEDEGKCADEEALEDEGRYGDEEADGVVAALGDEGKCDGEEAEVEAAVEGAEVVNKEGEAQAVPTIGAFYMHDDRFRDPENGRHGSQRKNFGGQKLWYPKDDNVWAHDRFYEMNSHHDRLYETNSHNSPNDSGRGPRGSFRAWGADRTHRYDHGYLERTLSQSYYHDDREEYKYVPKERRTFFATTRDHISFLKESNNMYGSANNYKRVPSKFHTYYDHGDTKNFAYVQRESHTYYGNAKDFTSAHDGYRGGVSNPSQNEEASSNAEGGKHPSQTLGFQTEKNFPMKQTSPSNLNSASPSFYHSRSSHQEQPFIQRGKARAVMFSKLFTSSVRMAHNSLKPQSRPVYRVKAVVPSGRGNTLDSLSTNAMEEIDNPGSNLSGSASDNYIQYSKSSDKGTVYQERSIHRPFQSTSRVSTLVFCPKPLSTTQIQSHVTSSNEDTETSMSPGLVNSLVSSAVKTELKEEVEGPSFTYDEGHVHGVTGARGLTLSDKGTLLYGLPSLISLSSTALQFNGQHPRGPDTPFIGRTLPRFVVRQLVGGSSEMNQMTWLLVSSSSTGAPGSTHNPPHFGSYYPQPSELVPSLVSPRDHSVTEDLTHEIPELDLLHIQLYCRKLQCLLKTKSQTNPFNSILFSKALIFVLYSKIQQLIFYPSRSTTLEQGPRCSSGWTMLRLLYGLDETGNGERKPLAPASPFSGPLAPTSVIRPLLPHPPNMFTSSSGSRQGKESPPELVSCEVVTGSTNANAGSYVDI</aaseq>

Gene Sequence

<dnaseqindica>1..581#1147..1279#1394..1764#1912..2339#2428..2709#3199..3367#4301..4414#5060..5100#5469..5605#6403..6717#ATGGCCGAGAAGGAGGAGGCGGAGGAGGAGGTGGAGGATGAGGAGGAGTACGAGAGCGACCTCGACGACGCGCCCCTACCGGCGGTGAGGCGACGTGCCGCGGCGAGCGACGACGAGGAGGGCGGCGGCGCGTCGGGTTCCTCGGCGCCGTGGAGCGTGGCGGGGTCGGACCTCGACTCCTACTCCGACTCCGACGGGCAGGGCGCCGCGGAGATGTACGACGACGAGGAGGAGGGGTCCGAGGAACGCGATGAGTTGGAGGCGGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGGGGAGGAGAGGCACTTGAGGACGAGGGGAAGTGCGCCGACGAAGAAGCGCTTGAGGACGAGGGGAGGTACGGCGACGAGGAAGCGGATGGCGTGGTCGCGGCACTTGGGGACGAGGGTAAGTGCGACGGTGAGGAGGCGGAGGTGGAAGCCGCGGTGGAAGGAGCGGAGGTGGTGAACAAGGAGGGCGAGGCCCAGGCCGTACCAACGATAGGCGCCTTCTACATGCACGATGACCGTTTCCGTGACCCGGAGAATGGCAGGCACGGGAGCCAAAGGTTCTAGCTTCTTCATCCTTGATTCAATGACTCAATGTTCTATTTTTCCGTTGTTTATCCGGACAGTAGTATAGTTCTGAGTGACAAACTGAAAATAGAGGTTATAGCCACAACCTGTGCTTTAGATTCCTCATCTATTCACCCAGGATTGTTTTATCAATCAATTAACCCCATTGTGTGCAAAATTCCGACAGTTTCATATGTACTATGTGCACTGGAATGACTGAATTATTCACTATGAGAGTGAAGATCGTATAATTTGGTGCGGCTAATAAGCATAGAAAATGCCAAAAGGGTACATTGTTTCAAACTGTCTAGCTGGAAGCCTGTAGCATGCATATTCCAATGTATTTTGTCTAAAGAGTTTGAACAGATAAATTGGTGTTTATCTTCATTCGTTAGTTATTGTCATCATTCACCAACTGGTTGGTAAGTGCATTTCCTGGGCAATGGCAATGGCAGCGCTTGACATGTGTTTCTTTTTCTATAAATTAGTTTCAACAATATTCAGTTTGATCTGGACACGTTTATTTGCTGCCTAATGCATCCAATGATCATAATTCAGGAAAAATTTCGGTGGCCAAAAGTTATGGTATCCTAAAGATGATAACGTATGGGCGCATGATAGGTTTTATGAGATGAATTCCCATCATGATAGGCTTTATGAGACGAACTCCCATAACTCTCCAAATGACAGTGTGAGTACTATGCCTCTTTTTTTTTGAGAAACGAGGTACTATGCCATTGTCACTATGTCTTTTTTGTGTCTATTCTTATTGACAGTGCTGCTATGTTTGTATTGTTGTTTTTAGGGAAGGGGACCAAGAGGCTCTTTTAGAGCATGGGGTGCGGATAGAACACATCGTTATGATCATGGCTATCTTGAAAGAACTTTATCCCAATCTTACTATCATGATGATAGAGAAGAGTACAAGTATGTCCCAAAGGAACGACGTACTTTCTTTGCTACCACCAGGGACCACATTAGCTTTCTGAAAGAATCCAACAATATGTATGGCAGTGCCAATAACTACAAAAGAGTTCCAAGTAAATTTCACACTTACTATGATCATGGTGATACCAAGAATTTTGCCTATGTTCAAAGAGAATCACATACCTATTATGGCAATGCTAAAGATTTCACCAGTGCACACGATGGTTACAGGGGGGGAGTTTCTAACCCGTATGTATCTCATTGGAGGAGTGATCCAGAGATATGTTCAGGACAATATATTAGGTCAGCGAAAGTTCCATTTTTGCTCCTTTTACTCTGACTACCTAGCTGAATCTAACATTAAGCAATGTTGTTGTCTATGCTTCACTGTTGCAGATCTCAGAATGAAGAGGCTTCTTCCAATGCAGAAGGGGGAAAGCATCCCTCTCAAACTCTGGGTTTCCAAACTGAAAAAAACTTTCCCATGAAGCAAACTTCTCCATCAAACTTGAATTCAGCTTCACCATCCTTTTACCATTCTAGATCATCTCATCAGGAACAACCTTTTATTCAGAGAGGGAAAGCGCGAGCTGTGATGTTTAGTAAACTCTTCACATCCTCTGTCCGTATGGCTCATAATTCTCTGAAGCCACAATCGCGTCCTGTTTATAGAGTAAAGGCTGTTGTTCCATCTGGTAGAGGGAACACTCTTGATTCTCTTAGCACAAATGCTATGGAGGAAATTGATAATCCTGGCTCAAATTTATCTGGATCAGCATCAGACAACTACATCCAATATTCAAAATCCAGTGATAAAGGAACAGGTTTGACCTTTCTTTTAGTGCACAAAGAGCATTTCTTGTTCAACAAATGGTCAAGCAATTGGCTCTTATGCACAGTCCTATAATGCAGTTTATCAGGAAAGGTCAATTCATCGACCATTTCAATCCACATCAAGGGTGTCTACTCTGGTGTTTTGTCCGAAACCTCTCAGTACCACCCAAATTCAATCTCATGTGACAAGTTCAAATGAAGATACTGAGACAAGTATGTCCCCTGGTTTAGTCAATTCTTTAGTGTCATCTGCAGTGAAGACTGAGCTAAAAGAGGAGGTGGAGGGGCCCTCTTTTACTTATGATGAAGGTCATGTTCATGGTGTTACAGGAGCAAGGGGCCTTACACTCAGTGACAAAGGTTTTCACTCGATCCCCAGCATTACTTCCAAGTTTGTGTTGTTAGCTAGGGTGCATCAACTCGACCTCCATCATTATTTTAGATTCGTATTGTTTCACAGGGTAAGTCAGTTTAGTAATACAAAATGCAACATATAGTGGGATATGAAAAGAAGAAAAAGCTGTAAAGAAATCAACCATGCAAAGTATCCTTGTTATTCACTGCAGATATTCTTTATGTAGCCATGCACTTCACTGAGGATGAAAAAATGGTTGATTTGATTTCATTGTTTGACTTTATCTATCAACAGACAAACTACATTTGTGTACAACAATTATGGAAATCTTTAGGGGTTACTCTTTGACATTATTTCAATAATAAGGATTGGAGCTAGGTATCATGGTACTCGCAGGTTCCTATAGAGTTCTTGGCTGGTCATGTGCTATAATTGGAGATTCTCTGTACTCTCATATGGCATATAGTTCGTTCTTTCTATATTTTTCGTTGCAGGCACTCTATTATATGGACTTCCCAGTCTCATTTCTCTTTCCTCCACAGCTTTGCAGTTCAATGGACAACATCCTAGGGGACCTGATACCCCTTTCATTGGCAGGACTCTGCCTAGATTTGTGGTTCGACAACTAGTCGGTGGCAGTTCTGAAATGAATCAAATGACATGGTATGCAGGACTTAATTTTCTTGCATAACTTTTGGAAGAACTATTCCACTTTCTTTAAATATTGTGGCTTGCTGTAGCCAAGCACTCCATTTTGAAATTTGCATTGCTCATAACCACCTGGGGTATTGGCAATTTCTTAACGAGGACAACAAATAGTTCTGATTGGATTGCTAAGTGGTGTGCCCAGCAGGGTTTAAGAAAAATGGTGATAAATGGCTGGTTAGTTAAATGAGCTGCAGACACAGGTGACTGCTAAAATTTGAATTGTGCCAAGTTATCAGTGAGTTTTAGTTCCAGCTGAATATGGCCTGGTTATGGGTTCCCGGGAAGTTGTCTGCTAGCTAGTGGAGCAGATAAGCTGAGTTCCAGTCTGATTCTGGTTTCTCGAATTCTTGTGCTTTGATTTATAATTGGTAGAATGTGTTTGGTGGCAACTTTCTCTGACATCCTAACCTGAACATTCCTTTGCAATGTCTCTTCAAATGACAAGCATAGTACCAATTGCTGCACCAATTGGTCTAACCTATGATCTGCTAGTACCAATTGCTGCACAGCTACATGCCTACATTGGGGAGTGTTATCTGGACTTTTACATAGTTTACTCTAGGGCATATAATTGTAGCATGTCTTTAAATTTTGGTTACATGGCATTTCATGAACATAGCACAACTTCAGTCATGAGTGAACCAGGCTCTGTACCATAAGATGCCCTTTTTGTCCAAAGTTTAGATTTATCTCATGTGCGAAACCATTCAAACAATCATTACACTTATTGGATTTCATCTCTTTAACATGTTTTCATAGGTATCTTAATAGGTTCAGTTTTATAACTAACACAATTCCATCTAAATGTGGCATCTAAATGTAGCTTTCTGGGCCTGAACTTGTATTTGTTTATTTTTCTTCTTTTTTAACATTGTTTCAATGAATTAGGCTGCTAGTATCGTCTAGTTCTACTGGGGCTCCTGGATCAACACATAATCCACCACATTTTGGCAGCTATTACCCCCAACCTTCTGAACTCGTGCCCTCATTGGTATCTCCAAGGTAAATATAAAGTTTTTTGTACATTACATAATTGGATTGCAGATTTTATAATTCAACCCTGATACGTATATATGTTAGATTGTTAGGGTACGATCATGTATTCATATCAGAAAGCTAGCTTGTATTTGGTGAACCAGAATAGTAATTGCGTCAGTGTCTGCCAAGGGTACTGTATTTCTGATTATGTTTTAAATATTTAGATAGTATTCAATGCAGATTTTTTAATAAACCTTGCTCTCAGATATTTCTGCTTTATGTCTCCCTTGGGAAATTTCTATAGATCAATCGCATATCATTGCGAAAACATTTCATGCTTAGGAAGTTAGCGTATAGTTTCCTGGACATTAGAGACGGAGACAGTTTTTTTTCCCTTTGTCTGCCACTCCTACCTTGTTCTTTTAAGACCAAGGACAAGAATTTGTGTATTTATACCTTTTGCATCAGAATATCAGAGAGTTTTCTGTCCTGATGCTGGCCAGTTTGATCCAGATTTGAGTTTTCTGCTTGTGTGTTGCCTGGCAATTATTGTAATGTTTCATTCCAGATTCCATGGCATAGTATGTACTCTCTTAATGAACATGAAGTATAGGGTAGTACAACATGGATGAACATCCATTGTTATCTTACTTTCTTCTTCCCCTGCAGGGATCATAGTGTAACTGAAGATCTGACCCATGAAATACCAGGTAAAACCACTCAATTTTTCTATTTTGTTTAATCTGTATTTCTATGATCTACTGATATGTGAATGGCTATTCTCCTGATATTTTCCAAAATTACATGAGTTATCTTTGTATCCTTTTTGCCAGAGGTTGTAGGTCATCAACTTGGCCAGCGCCAAAACAAGATTCGTAGGTAAGTTCAGAGATCATTAAGATTTAGCATATGACAAACACCTAATTATGTCAAATTGTCAAGGCGTTCTCATTTGACAAACCCTTACAATTTTCTAGATACTCAGAGATGAACTTTGCCTCATTGAAATAATGAGGTTGGTGATGAATGCAATGGACGAACAAAGTGGATTGGCATAATCAGCTTTTGGTCTGTGTAGAACTTGATTTGTTGCACATCCAGTTATATTGCCGCAAACTTCAGTGCCTTCTTAAGACCAAGTCCCAGACCAATCCCTTCAACAGCATCCTGTTCTCTAAAGCACTTATTTTTGTTCTGTATAGCAAGATACAGCAGGTATGCGCATTTCTTCCATTTATAGTTTCATGAATTACTACTAGTTTACCCCTATAAACTGCATTCAGTTCAGCAGTCACAAGGAAAGCAAATTCATCTCTACCTACACTCTGATATATATGCATTGTTGCGACCCTCTGCAATAAGTCTTCTGCCACTTAACTCGTATGTGCGGCATATGCAAGTCAAAGTTATGGAATAGAGCCAGAAGGCATACCAAGCACCTTTCATTGTTCCCTTGCAGGTTTCACTGTTTGAGCTATGCTAGCCCCTTCGCATATACCTCGTTTGCACCGCTCTGGTTCTTCTGGCGGGCCTGTAGTACTATCTTGTTAGGTGAGATTAGTATACGATACTCCATGATTCTTTGCTTTCTCTTATGAGCGTGCTAATGATTGCTTATGACCTTGTCAGGTTTCTCATCCACGACGAACCCAAAGACAACAGTTACAAGACTACAGTCACTCTTGCTCGACAACAGGCTTTACTTCTTCCCCTGTCCTTTTCACAGTTTTCTGTTGAAGCTCTTGTTTTCTCGGCCTTTGCTAGATTAGTACTACTTTCGTTAGCACTTCGTGCGTGGTGGCAACGCAAGAAAAATAGAAATGATATGCCATGTTTTCAGGAAACTTACTGGCACGTTAACGTCCGGGTAGGGGCTGGCACTGGGGACGCATCTCACATCTTATTCATACGTTTAACGTACGGGTATGGTTTCTCTGCTCATTTGGGCTACTGGGAGACGTTCAACCAAGTTTTGTGCCCCCAAACTCTCAAGCCGTCCTTTATTCCTTTAGCTGATTTTCTACCCTAGTCGCTCAACTACTCTCGAGCAAGGTCCCAGGTGTTCATCCGGCTGGACCATGCTGAGATTACTATATGGATTGGACGAAACGGGCAATGGAGAGAGGAAGCCCCTGGCCCCTGCTTCACCCTTTTCAGGCCCTCTTGCTCCTACATCCGTGATCCGTCCACTGTTGCCCCACCCTCCGAACATGTTCACGTCGTCGTCTGGTTCAAGACAAGGCAAAGAGAGCCCACCTGAGCTTGTGAGTTGCGAGGTGGTCACAGGCAGCACCAATGCTAATGCTGGTAGCTACGTAGACATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004347