BGIOSGA004440

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Revision as of 11:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004440, complete gene.| tag = P0439E0...")
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Gene Name

BGIOSGA004440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004440, complete gene.

LocusTag

P0439E07.31

Ensembl Transcript ID

BGIOSGA004440-TA

Ensembl Protein ID

BGIOSGA004440-PA

Length

4484

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34271995..34276478

Sequence Coding Region

34271995..34273008,34273107..34273174,34273660..34273741,34273810..34273902,34273987..34274139
,34274371..34274439,34274562..34274655,34275065..34275148,34275604..34275692
,34275811..34275927,34276038..34276178,34276296..34276478

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34271995..34276478 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34271995..34276478 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCGCCCGAAGACGACGGGTCCTCCTCCGCGCGGACGCCGCTCATACCCCCCACACCTCCTCCTCCCGGCCGAGCGGTGGCGCGGCTCCACCCTCTCCCGCTCCTCGTTGCGGCGGCCTTCGCCGCATCGTACCACCTCCTCGTCGCGCCCGCACCGTCGTACTACCGCTCGCTCTTCCTCTCCCTCGGATCCAACGACACCGCGGCAGCCCACCTCCACGCGCTCACCCTCCGCCCCCACCTCGCGGGCACCGAGGCCAACGCCCGCGCCGCCGAGCACGTCGTCTCCGCGCTCTCCTCCCTCTCCTTCCCCACCCGCGTCGTGCCCTACTCCGTCCTCCTCGCCTACCCGGTCCACCGCTCCCTCTCCCTCTCGGCGCCAGGCCACGCCACCACCCCCTTTGCGCTGGTGCAGGACACATACCCCGGTGATCCCTATGCCGCGGTCTCCGCGGAGGCCGTCCCCACCTTCCTCGCCTACGCCGCGTCCGGCTCGGTCGCCGCCGAGGCCGTCTACGCTAACTACGGCCGCCCGGAGGATTTCGCCTACCTCGCCGCCCGCGGCGTAGACGTCACCGGGAAGGTCGTCCTCGCGCGCTACGGCAAGGTGTACCGCGGCGACATCGTGATAAACGCCCGGAAAGCTGGCGCGGCGGCGGCGGTCATATACACCGATGCCAAGGACTACGCGGCGGGGGAGGCCTTCCCGGATGGTCCATGGATGCCGCCCACCGGTGTGCAGGTCGGGAGCACGTTCAAGGGGGTGGGGGATCCCACGACGCCGATGTGGGCATCGTCGGAAGGGTGCGAGCGCGTGAGCATCCCGGAGGCGATGGCCACCGACGACATGCCGGGGATACCGGCGCTGCCTGTGTCGGGAAGAGATGGGGAGGCTATACTACAGCTTATCGGCGGTGATGTCGCGCCCAAGGATTGGCAAGGCGGAGATGGCTCGCCGGTTTACCGGCTCGGGCCCGGGCCGGCGGTGCTCAATCTCACCTACATTGGGAACGAGACAATGGCTACTATTCAGAATGTCATCTCAGTGATCGAAGGGAAAGAAGAACCTGAACGCTATATAATCCTTGGTAATCATCGTGATGCATGGACTTTTGGGGCAGTTGATCCGAACAGTGGAACAGTAGCCTTGCTTGAGTTAGCTCAAAGGTTCTCTGAGCTACAAAAGAAGGGTTGGAGGCCTCGACGGACCATCATCTTGTGTAACTGGGACGCCGAAGAGTACGGACTGGTTGGATCCACTGAATGGGTTGAAGAGAACAGGGCTATGCTAACTTCAAGAACTGTTGCTTACCTGAATGTTGATTCTGCAGTGTATGGTGCAGGGTTTTATGCATCAGCTACTCCTCAACTTGATGAGTTGCTTAAGGAGGCGAGTAAACAGGTTCAAAATCCAGATAATGAGACACAGAGTCTGTATGACTTATGGATGGCTTCTGATAGTTCTTCCATGATTAAGATTGGAAGAATAGGAGGTGGAGGATCAGATTATTCTGCCTTTGTTCAACACATTGGTATCCCTTCAATTGACATTTCTATGGGATCAGAATATGCGGTCTACCATAGCTTGTATGATGACTTTGTGTGGATGGAGAAGTTCGGAGATCCCTTGTTCCGCAGGCACGTCGCAGTGGCAAGCATGTGGGGGCTTGTCGCCCTGAGGCTTTCCGATGAGGAGATCCTACCCTTCAACTACAGCACTTATGCTGTAGAGCTTGAGAAGGGTGCAATCGATATAAATAAGAGATTGCTGGGAGTGCCTGTCAGCTCATCTCCCCTGCAAAAGTCAATCGCCGAGTTCAAAAGGGCAGCTCTACAAATGGATTCTGAAATGAAGGCCTTACAGACAAGGAAAGTTTGGAACCCCTGGAGAAACAATCCCCTGAAGGTCAGAGATCTCAATGAGCGGTTGATGATGACGGAGCGAGCATTCACCGATCGAGAAGGACTATCTGGGAGGCCATGGTACAAACACCTGATTTATGCACCATCACTGCATGATGATTACGGAGCGCAGGTGTATCCAGGTGTTGATGATGCCATTCAGATGGCAGAGAGGACGAATACGTCCGAATCCTGGCGATCTGTGCAGCATGAGATTTACAGGATTGCTAGGGTCATCAACCAGGCCTCGCTAGTCCTAAGTGGAGGGTTAACATAA</cdnaseq>

Protein Sequence

<aaseq>MPPPPEDDGSSSARTPLIPPTPPPPGRAVARLHPLPLLVAAAFAASYHLLVAPAPSYYRSLFLSLGSNDTAAAHLHALTLRPHLAGTEANARAAEHVVSALSSLSFPTRVVPYSVLLAYPVHRSLSLSAPGHATTPFALVQDTYPGDPYAAVSAEAVPTFLAYAASGSVAAEAVYANYGRPEDFAYLAARGVDVTGKVVLARYGKVYRGDIVINARKAGAAAAVIYTDAKDYAAGEAFPDGPWMPPTGVQVGSTFKGVGDPTTPMWASSEGCERVSIPEAMATDDMPGIPALPVSGRDGEAILQLIGGDVAPKDWQGGDGSPVYRLGPGPAVLNLTYIGNETMATIQNVISVIEGKEEPERYIILGNHRDAWTFGAVDPNSGTVALLELAQRFSELQKKGWRPRRTIILCNWDAEEYGLVGSTEWVEENRAMLTSRTVAYLNVDSAVYGAGFYASATPQLDELLKEASKQVQNPDNETQSLYDLWMASDSSSMIKIGRIGGGGSDYSAFVQHIGIPSIDISMGSEYAVYHSLYDDFVWMEKFGDPLFRRHVAVASMWGLVALRLSDEEILPFNYSTYAVELEKGAIDINKRLLGVPVSSSPLQKSIAEFKRAALQMDSEMKALQTRKVWNPWRNNPLKVRDLNERLMMTERAFTDREGLSGRPWYKHLIYAPSLHDDYGAQVYPGVDDAIQMAERTNTSESWRSVQHEIYRIARVINQASLVLSGGLT</aaseq>

Gene Sequence

<dnaseqindica>1..1014#1113..1180#1666..1747#1816..1908#1993..2145#2377..2445#2568..2661#3071..3154#3610..3698#3817..3933#4044..4184#4302..4484#ATGCCGCCGCCGCCCGAAGACGACGGGTCCTCCTCCGCGCGGACGCCGCTCATACCCCCCACACCTCCTCCTCCCGGCCGAGCGGTGGCGCGGCTCCACCCTCTCCCGCTCCTCGTTGCGGCGGCCTTCGCCGCATCGTACCACCTCCTCGTCGCGCCCGCACCGTCGTACTACCGCTCGCTCTTCCTCTCCCTCGGATCCAACGACACCGCGGCAGCCCACCTCCACGCGCTCACCCTCCGCCCCCACCTCGCGGGCACCGAGGCCAACGCCCGCGCCGCCGAGCACGTCGTCTCCGCGCTCTCCTCCCTCTCCTTCCCCACCCGCGTCGTGCCCTACTCCGTCCTCCTCGCCTACCCGGTCCACCGCTCCCTCTCCCTCTCGGCGCCAGGCCACGCCACCACCCCCTTTGCGCTGGTGCAGGACACATACCCCGGTGATCCCTATGCCGCGGTCTCCGCGGAGGCCGTCCCCACCTTCCTCGCCTACGCCGCGTCCGGCTCGGTCGCCGCCGAGGCCGTCTACGCTAACTACGGCCGCCCGGAGGATTTCGCCTACCTCGCCGCCCGCGGCGTAGACGTCACCGGGAAGGTCGTCCTCGCGCGCTACGGCAAGGTGTACCGCGGCGACATCGTGATAAACGCCCGGAAAGCTGGCGCGGCGGCGGCGGTCATATACACCGATGCCAAGGACTACGCGGCGGGGGAGGCCTTCCCGGATGGTCCATGGATGCCGCCCACCGGTGTGCAGGTCGGGAGCACGTTCAAGGGGGTGGGGGATCCCACGACGCCGATGTGGGCATCGTCGGAAGGGTGCGAGCGCGTGAGCATCCCGGAGGCGATGGCCACCGACGACATGCCGGGGATACCGGCGCTGCCTGTGTCGGGAAGAGATGGGGAGGCTATACTACAGCTTATCGGCGGTGATGTCGCGCCCAAGGATTGGCAAGGCGGAGATGGCTCGCCGGTTTACCGGCTCGGGCCCGGGCCGGCGGTGCTCAATCTCACCTACATTGTAAGTTGCTGTCGATGAATTGGACTGTAAAGGTGAGATGCTTTATAATCCTTTTATGGCTCGAGGTAGTGATGATATTTGGGTGGCACTGTTTGCAGGGGAACGAGACAATGGCTACTATTCAGAATGTCATCTCAGTGATCGAAGGGAAAGAAGAACCTGAACGGTAAACTTTATGCTCTAATACTGTACTGCCCATATTTTCTGTCCGGAGAGTTCAATATCCCCAACTCGGCCACTGTTCAGTGTTCGCCTTGAAGAGTGTAAAGTTCATGCCCTACTCATTTAATAAAGCGGAACCATAGAAACTGAAAGAGAACTGTTTTACATTTCGTTGTTGATCACCATTTATTTCCTACTTCTTCCTATTCTTCTTCTTCTTATTATTATTTTTCTTCCTCTTCTTTTTTTCTTCTTCTGTTTCCTTTTTCCTTCTTCTGTTTCCTTTCATTGTCTTCCGTTGTTTTTCCACTCTAATGTACTCTTGCTGTAACACCTTGACTACCATTAATAAAATGGTTACAAGGTAGAGCCTCTCTACCTTCTTCAGTCAAAAAAAAAAAATCACCATTCTGAATAAGTGCCTAGTAGTGATGAATTTATGAGTCAATAAGAAAACAATGCAGTAAAATAATTATGAAACTCACGCAGCTATATAATCCTTGGTAATCATCGTGATGCATGGACTTTTGGGGCAGTTGATCCGAACAGTGGAACAGTAGCCTTGCTTGAGGTATGCAATATCTGGTTACGCTATTGACACTTTTTATTTCATTGAATTTATGATCTGTGGCTATTTAGTTAGCTCAAAGGTTCTCTGAGCTACAAAAGAAGGGTTGGAGGCCTCGACGGACCATCATCTTGTGTAACTGGGACGCCGAAGAGTACGGACTGGTACCTCTCTCTCTCTCTGTGACTATTATCAGAAGTAATTCACATGTCAATCTATATTCTTATTTCTTTTGTTTGAAAATGAAGGTTGGATCCACTGAATGGGTTGAAGAGAACAGGGCTATGCTAACTTCAAGAACTGTTGCTTACCTGAATGTTGATTCTGCAGTGTATGGTGCAGGGTTTTATGCATCAGCTACTCCTCAACTTGATGAGTTGCTTAAGGAGGCGAGTAAACAGGTATTCCAGTTTTAGATGAATTTCCTTTAGTCAATAACAGAATGTTGCATGACAAAAAGTTACAAGTGATCTTTGCTGCAATTTTTTTTGGTTACTGATACAGATATCTAATTTATTTTTTCTGTTGGTATGAATATCAATCAACTATAGTTTTATTGTTAGTTTGACTTTTTTCGCTATCAACTATATCGGTTCTCTAAATATGCTACGTCTCGTATCTTACTTGGGAAGGTTCAAAATCCAGATAATGAGACACAGAGTCTGTATGACTTATGGATGGCTTCTGATAGTTCTTCCATGGTAAGCATTTCAAGTTCAGCTAGAGCAATTGTTGTTACACATGCTCGTGTAAAGAGTAGATGCATGTATAGCCTATACTAGTCTCTATCCCTCTTAACCATATGCTGATGATACACATGCAGATTAAGATTGGAAGAATAGGAGGTGGAGGATCAGATTATTCTGCCTTTGTTCAACACATTGGTATCCCTTCAATTGACATTTCTATGGGATCAGGTTTATCCTATGTTTCTTAATCAACTACACTATTCATTCCTTTCAAGATTGAGTGTTTTTAGGCAAATTGAGAACATTTATTAGATGCAGTGGTGGAGCCAGGGCCCGGCCAGCATGGGCAGGTGCCCGGGCTCCTAGACCTGCAGCAGCGTATTACTCCATGGCATGCAGCATATTGCTCGTTAATTACACAGCTAATTACCTTGCTTCGTTCAATCTAATGGAGCCCAACACGCATGATCAACCAGCGCAAAGCAAGGTTTTATATGCCAAATCTACTTGTGTTTGTGATTAATGGTCAAGGTTTTATGTGCATGCTTCACCCGCTGTTAGGTTTGCCTAGGCTAAAGAAAATTTTTAGATCCGTTACTGATTAGATGAATCAAACAAGTGTGCTGCTTGTTTGCAGAATATGCGGTCTACCATAGCTTGTATGATGACTTTGTGTGGATGGAGAAGTTCGGAGATCCCTTGTTCCGCAGGCACGTCGCAGGTACCCCTGTATGGCTATATCTTACTTTATGTATATTTGTCATGGCAGCTGTGTCTGTTCTTGGGGGAAGCATGATGGCATGACATTTTCATGTACATGTTTTTTCAACTTTGTATGAAGAAACATGAATATTGAAACATTCTCTGCTTTGCTGGGAATTGAACCTCATAGTTTTCTATGCAATTATATTCATATCTTACCTTTTTGGCCAAACTATATGTAGAACTTGGATATAGTACGGATGTATTGTTGTAGTGCACATGTACTGAGAACTTGCAATGTTCCACTGCATTTATATAATTGCCTAATAAATTAAGTATGCAAGTAACTTTTGGTATAAAAATTTATGTGTGCTCCATCATTTATACTTTTGCTTGAGTTGATGAGCTGAAAACGATCATGTTAATGTATCTCCATTTGCCAAAATTTCGAGTCAACGTTCTCTCTCTCTGCAGTGGCAAGCATGTGGGGGCTTGTCGCCCTGAGGCTTTCCGATGAGGAGATCCTACCCTTCAACTACAGCACTTATGCTGTAGAGCTTGAGGTAACTTATCGTTCTGTTCTCAAACAAATTTAATGATTTTCTTTTTCAAAACCATGCAACTTCTATGCATTATGAGAAGTCCAAATCTAGTGTCATAATGGTTGCTCTCAATTCGCAGAAGGGTGCAATCGATATAAATAAGAGATTGCTGGGAGTGCCTGTCAGCTCATCTCCCCTGCAAAAGTCAATCGCCGAGTTCAAAAGGGCAGCTCTACAAATGGATTCTGAAATGAAGGTGTCTTTTCTTATGTTTGTTGCATGCTGTTGCCTGATCCATAGTTTCAACTTTAAGCTCTCCGCTCAAAAGGAAAAAACTTTAAGCTTCCTGTTTCCCTTTCCTATTAGGCCTTACAGACAAGGAAAGTTTGGAACCCCTGGAGAAACAATCCCCTGAAGGTCAGAGATCTCAATGAGCGGTTGATGATGACGGAGCGAGCATTCACCGATCGAGAAGGACTATCTGGGAGGCCATGGTACAAACACCTGGTAAGTTTTTTGTGCCAATATTTTTTGTTGATGAACTGCTGTAGTTTTTTCCTTTTCTTTATTTTTTTTTAAAAAAAACTGCTGAGTGCTTTACTTATGGGGAACAAAACAACGCAGATTTATGCACCATCACTGCATGATGATTACGGAGCGCAGGTGTATCCAGGTGTTGATGATGCCATTCAGATGGCAGAGAGGACGAATACGTCCGAATCCTGGCGATCTGTGCAGCATGAGATTTACAGGATTGCTAGGGTCATCAACCAGGCCTCGCTAGTCCTAAGTGGAGGGTTAACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004440

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004440&oldid=42164"