BGIOSGA004452

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Revision as of 11:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004452| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004452, complete gene.| tag = P0481E1...")
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Gene Name

BGIOSGA004452

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004452, complete gene.

LocusTag

P0481E12.15

Ensembl Transcript ID

BGIOSGA004452-TA

Ensembl Protein ID

BGIOSGA004452-PA

Length

3803

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34470520..34474322

Sequence Coding Region

34470520..34470619,34470706..34470815,34471899..34472030,34472115..34472188,34472255..34472360
,34472460..34472528,34472885..34472949,34473057..34473155,34473340..34473439
,34474260..34474322

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34470520..34474322 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34470520..34474322 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGTCTCGTTGGCGAGCCCTCTCCGGCGAGTCCTTCACGTCCCTTTCGCACGCCGCGCTATCCCCACATCGTACCACTTCATCCCTAGCGGACGGTGTCACGCGGCTCTCTCCTTCGCCGCGGCAGCAGCAGGAGATTCGGCGGTTAAGGCGAGCTTGGATAGGAATGCAGCCGAGGAACTCAGGAGCATCCTGGATATGGCACAAAGGGCTTCCCAACGGAGAGATGTTTTCCACACCAATTTTCTTACTCCACCTATAGTGAAGGAGTGTATGCTGGCAATTGAGAAGTTAGCAGACATCAAAGCGGTAGCACAGGGGGGCTACCCACAGGCTGAGCGATGCCGAGTTTCAGTTGGACATCCGGACTGTATGACAAGCAACCCAGATGTAGTTGCTGCTTTGAGCATCTCAGGGAATTTCAGATTGGAACCCTGTTCTCATGGTGACTTTCTTGGTGCTATTCTTGGGACAGGAATAACAAGGGATAAAGTTGGAGATATACTTTTGCAGGGAGAGAGAGGTGCTCAGGTCCTTGTTGATCCTGAACTTGTTGACTATCTGACTTCCACACTTGAAAAGGTGGGGAAAGTTGGAGTTTCATGCACACAGATTCCTTTGCTTGCTCTAGAATATGAACCACCAAGGACCAAGTCATTTAAAACTGTAGAATCATCACTCAGGGTTGATGCCCTGGGTAGTGCAGGATTTAAAATCTCACGTACAAAGCTTGCTAGTTTGATCAGTGCTGGGGATGTCCGTGTGAATTGGTCACCAGTTTCGAAAAATGGAGTGACTCTCAAGGCTGGGGACGTTGTTTCTGTCAGTGGAATGGGGAGATTAAAGATTGGGGAAATTGTGACTACGAGGAAAGGAAAGTACGCAGTTGAGCTGATTCGATATTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAVSLASPLRRVLHVPFARRAIPTSYHFIPSGRCHAALSFAAAAAGDSAVKASLDRNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLADIKAVAQGGYPQAERCRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGTGITRDKVGDILLQGERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKGKYAVELIRYL</aaseq>

Gene Sequence

<dnaseqindica>1..100#187..296#1380..1511#1596..1669#1736..1841#1941..2009#2366..2430#2538..2636#2821..2920#3741..3803#ATGGCCGCCGCCGTCTCGTTGGCGAGCCCTCTCCGGCGAGTCCTTCACGTCCCTTTCGCACGCCGCGCTATCCCCACATCGTACCACTTCATCCCTAGCGGTAAGCCCCGTACCCACCGCTCGGTTCGATTCCGGTTAGGTCCGACGATTCTGACGCTTGGCTACCCATGGCTCGTTGTGGTGCAGGACGGTGTCACGCGGCTCTCTCCTTCGCCGCGGCAGCAGCAGGAGATTCGGCGGTTAAGGCGAGCTTGGATAGGAATGCAGCCGAGGAACTCAGGAGCATCCTGGATATGGTAGTTTGTTTTCCACCATTAAACCTCAATTATTAAGATCAACTTGTTGAGATTACTAGATTAGGTGGTTTATAGGAGTGCAATTTGTTGCTTATGGACGTGTGTCTGATGAAATGCCTTCATGGTTAAATCATTCCCCCCCCCCCCCCCCCAACCCTGATAAACGATTTCACAAACAATTATGAGCTTCAGTTTATGTACTCCATCGAGTGAATTTTGCCACTATGAGCACATTGGTCTCAAGGAAATAAAGAAAATGCTTTGTGTTTTAGTTGTTTTGCTCTCGGCACATCAGACAGATTTTTTCTTTTTTTTTATGGCAGATCAATATATTGACCCGGCTTTAGAAAAAAGCCCAAGAACAATAACAGAGTCTTATACAAGAACTGGAAAATAAAAGAAACACAAAAAGATAGCTGGGGAAACCAGTTTTCCAGAGACAAAAGGAACGTACTCCCAACCTAACCACACCCTTACAGAAAAAACTGAAACTCAGGCTAAAGCTATTCTATAGCGATGCAGGTAGCACATGAGGCCTGACTTGATACAGTTTTATCCTGATTGCTTCACACCATCCTCCCAGCAGCTCCTGGTCTTCCTCCTTTAGCAAAATGCGCCACTTCTGTATGAAAGAGAGCGATTTATAAACCACATAAAGGGGAGACTTGACAAGAATATTTTCAAACACCCAGTCGTTTCTAATGATCCAAATAGCCCAACAAACCCCCCCCCCCCCCCCAATTAAAGAGATCCAAGGTTTAAACTTTTTCCTATCTTTGAGCAGACTCATAGACTCCCATAGATTATTAGGTAAAGAAACCAGATTCAAAGCATCCCTAATAACACACCAGCCAAAAACAGCTAAGGGACATTTAAACAAGATATGATTAGTAGTTTGCCACACCAGACAGATTCACTCACTATTGTTTTGCTGATTGCAAACATAACCTTTCAACAACATTGAACTAGTTTGCTTTTGTAACTAACCACAAAATAAGAATGTTTCAAGTTGTAAGTGCAGTATTTCATGTTGATATGGTGCTTTGAACTTCATGAATTTATGATGGTATCCAACTTATGCAGGCACAAAGGGCTTCCCAACGGAGAGATGTTTTCCACACCAATTTTCTTACTCCACCTATAGTGAAGGAGTGTATGCTGGCAATTGAGAAGTTAGCAGACATCAAAGCGGTAGCACAGGGGGGCTACCCACAGGTGAATTTGAGTAACATCAAAGGAAATTGTTTTATTAGCTTCCATTACCTAATCTGTCCCACTCTCACCTGTTCATTTATCTAGGCTGAGCGATGCCGAGTTTCAGTTGGACATCCGGACTGTATGACAAGCAACCCAGATGTAGTTGCTGCTTTGAGGTTCTCTCAAATTTGCACTATAAGCAGTTCCATCTTTTATATAAGCTAACTTTGAGGCCTTCTCAGCATCTCAGGGAATTTCAGATTGGAACCCTGTTCTCATGGTGACTTTCTTGGTGCTATTCTTGGGACAGGAATAACAAGGGATAAAGTTGGAGATATACTTTTGCAGGTGCACATGCCTTCCCAATCGCTTAATTTCTGGATTGTGTTGTGAACTTTGACTTTTGTCCGTCTGAGGTGCCTCTTTGTGATCTTTTTTTTTTGTCAGGGAGAGAGAGGTGCTCAGGTCCTTGTTGATCCTGAACTTGTTGACTATCTGACTTCCACACTTGAAAAGGTGAGTTTATATATGTTATATAATTTCTTACCTATATATGACACAGAACTACAGAAGTTATAACATTATCTTACCCCACATGTTTTCACTTATGTTGATTACATGCTATGCAGACAACAGAAGCTCTGAAGCTACTGTGTTTTTTATTATTTTTTTTTACTCATAGCACATTTAAAATAGCAGCACATGTTCCAATATTTTTGTGGTTATTTGTATTGTAGAATAACTCTCTAGATTAGTTACATGTTAGTCTTGTATTGATCTAACTCTGCCCATGAACTTTGACTGCTGTATTTTTGTTGTTATTTCAAACCCTTGCAAATGCAGCTTACTCTGAATTGTGTTTGATTCAACAGGTGGGGAAAGTTGGAGTTTCATGCACACAGATTCCTTTGCTTGCTCTAGAATATGAACCACCAAGGTTTGCTTGACATCTGATCTCATCTCAAAGTTGGCTCATTTTTATTTACTTTTGGATAAATGCCTGGACAAAGATACTCAACACTTAAAAGTACCTTTGAACCGCAGGACCAAGTCATTTAAAACTGTAGAATCATCACTCAGGGTTGATGCCCTGGGTAGTGCAGGATTTAAAATCTCACGTACAAAGCTTGCTAGTTTGATCAGGTAAGATTTGTGAGCTATCCATCTTCTTAGGTTCATTAAAACATCTCTTTATCTTAACATCAGTGGTTTACTGTGGGTTATCTTCCCTTCTACCTTGGATGGTGCCATCCACGCATTATTTTGTTTAATTACCGCTCATAAAGCAATTGATATATGTATCCAAATCTCTCTTTTGTTTGTCCAGTGCTGGGGATGTCCGTGTGAATTGGTCACCAGTTTCGAAAAATGGAGTGACTCTCAAGGCTGGGGACGTTGTTTCTGTCAGTGGAATGGGGAGATTAAAGGTAAAAAATTATATGCAATCACCACATTAATAGACGACTTCTAGGATAAATTTTGATGTTGCAATTGGCGCGTAAGGTATTCCACGAATGGGGTTAAGGGAAAAGGGGCATTCAGGTGTTTGCCACTCCAAAGAATGACGTTCAAGAATTCCCATTCCATGCGCCATTGGCATGTAGGTCTTGGGCCACATGCCTGTGACACAGGGCATGTCCTTTTTTCTGAAATGGAACTTTTGGAGTGTTATATATATTTATTACTTCCTTACAAAAATATATTGGTGCTTGGATCTAAATCACTACGTCAATTAAGTTGGATACCATTCTGCTTTTGCTTTGTATTGTTTCAACCTGAGAATACATCCAAAACTATAAGATTTTGTATTGTTGTGAAACTATGAGCTCAAAAGTTTCAAATAATAAAGCCACAGCCTTTACTGTGTACTGATGTTGTGATGTTCATGGCGTCGTCTTCTTTTTTGTTCATTCTGAGCAATTGTCATAACGGCTTCATTGTTGTAGACTGTCCTATAGGCTGCATATTACTTTAGACTAATGTTGCAAGAACTATGTGGATCAGACCTCCAGATGTACATCGATAAAGTAAATGCTTTGCTTTGCTGAAAATAGGATTTTATGAATCAAGGATTATGTGTTAATTTGCAAATACATAATGTGAGGGAATATAACATGCTATGGAAGATGTTTGAATGCTACTAGATGTGTATTTCTTTTTAAAAAGTTATGAATTCCCTATTCACTTGAATCTATATCAACCAGTTCTATGCTTGACTTGTTTAAATTATTTATTATTTATCTCTAGATTGGGGAAATTGTGACTACGAGGAAAGGAAAGTACGCAGTTGAGCTGATTCGATATTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004452

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004452&oldid=42176"