BGIOSGA004486

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Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004486| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004486, complete gene.| tag = OS01G07...")
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Gene Name

BGIOSGA004486

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004486, complete gene.

LocusTag

OS01G0757400

Ensembl Transcript ID

BGIOSGA004486-TA

Ensembl Protein ID

BGIOSGA004486-PA

Length

5447

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35048123..35053569

Sequence Coding Region

35048123..35048270,35048430..35048530,35049926..35050069,35050192..35050247,35051009..35051074
,35051158..35051265,35051493..35051559,35051984..35052068,35052437..35052597
,35052758..35052859,35053075..35053297,35053424..35053569

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35048123..35053569 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35048123..35053569 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGAATCGATGTGACGAAATAGGCGATAAGGAAGGGGAAAGCCGATGTCGATCGGGGCACCGGCCGCTGGAGACAAGCTGCTGTGGAGGAGTAGCAATTGGCGGCCTTCTTGCCACGGTTGTGTCTAGGATTGGGGGCACTGAGGTAACTCACATCTGGGGTCACTTCGGGTCACCCACGGGTTTACTTCTGATCCCCGCCCTGGCCCGGAAATTTACGGGCCCCGTCCCCACTCACCCGTGGGATTTCAAGGGGTTCTGGGAGTCCAGATTCGGGGGCAAGAAGGAGCAGGAGCCGGAGCAGAACGGGCACGCCAATGGGGTGGCGAACGGGAGCGTCAGGAAGAGGACGTCCGATTTGGCGGTCTACGAGCAGTTCGAGCAGCAGGCCAGGCAGACGGAGGTGCGCGCCGCGGCGATTCGCGATGGGAATGCTGATGCGATCCAGAAGCCCCTCCTACCTTCGTTTGAGTCAGCTGAAATGCGTAATCTTGCAGAGACATTGTTGCGGGACATTATTCGCGGCAGTCCAGATGTGAAATGGGAAAGCATCAAAGGACTGGAGAATGCCAAACGCCTTCTAAAAGAGGCAGTTGTCATGCCCATAAAGTATCCCAAATACTTCACTGGTCTCTTGTCACCATGGAAAGGCATTTTACTTTTTGGTCCCCCAGGAACTGGGAAGACAATGCTGGCAAAGGCTGTTGCTACTGAGTGTAAAACTACCTTCTTCAACATTTCAGCATCATCAATTGTTAGCAAATGGCGTGGGGATTCAGAGAAGCTAGTTAAAGTTCTGTTTGAGCTTGCTAGACATCATGCACCATCGACAATATTTCTTGATGAAATTGATGCTATTATCAGCCAACGTGGTGAAGCTCGCAGTGAGCATGAAGCTAGTCGACGCTTGAAGACTGAGCTACTCATTCAGATGGATGGCTTGACAAAGACGAACGACTTGGTATTTGTACTTGCAGCAACAAATTTACCTTGGGAACTGGACGCAGCTATGCTCCGCCGGCTTGAGAAACGGATTCTCGTACCTCTTCCTGAGGCTGAAGCAAGGCATGCTATGTTTGAGGAACTTTTGCCATCAACTACCTCAAAGCTAGAGGTTCCATATGATACTTTAGTTGAGAAGACTGAAGGGTACTCTGGTTCAGATATCCGTCTTGTGTGCAAAGAAGCTGCCATGCAACCACTAAGACGTCTTATGTCAGTTCTTGAAGCCAGAGATGAGCTGGTGCCTGAGGAAGAATTGCCCGAGGTTGGTCCTCTCAAACCTGAAGACATCGAAGTTGCTTTGAGGAACACAAGGCCGTCTGCGCATCTCCATGCACATCGCTATGAGAAGTTTAACCAGGATTACGGAAGCCAGATCCTTAGTCAGGAGCAAGCCTGA</cdnaseq>

Protein Sequence

<aaseq>METNRCDEIGDKEGESRCRSGHRPLETSCCGGVAIGGLLATVVSRIGGTEVTHIWGHFGSPTGLLLIPALARKFTGPVPTHPWDFKGFWESRFGGKKEQEPEQNGHANGVANGSVRKRTSDLAVYEQFEQQARQTEVRAAAIRDGNADAIQKPLLPSFESAEMRNLAETLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEAEARHAMFEELLPSTTSKLEVPYDTLVEKTEGYSGSDIRLVCKEAAMQPLRRLMSVLEARDELVPEEELPEVGPLKPEDIEVALRNTRPSAHLHAHRYEKFNQDYGSQILSQEQA</aaseq>

Gene Sequence

<dnaseqindica>1..148#308..408#1804..1947#2070..2125#2887..2952#3036..3143#3371..3437#3862..3946#4315..4475#4636..4737#4953..5175#5302..5447#ATGGAGACGAATCGATGTGACGAAATAGGCGATAAGGAAGGGGAAAGCCGATGTCGATCGGGGCACCGGCCGCTGGAGACAAGCTGCTGTGGAGGAGTAGCAATTGGCGGCCTTCTTGCCACGGTTGTGTCTAGGATTGGGGGCACTGGTTAGTGGCTTGCTGCTCGCAACGCGTGTTGGGGCGGTGGGGTTTGGTTGAAGGAAGGAAAGGGATTAGGGTTGATGGGAACTAGGGTGTTGAGTGTTTATATGTCAATTTGAAATGGGCTTGCTGGACTTGTATTGTTGCAATGGGCTATTTTTAAAGAGGTAACTCACATCTGGGGTCACTTCGGGTCACCCACGGGTTTACTTCTGATCCCCGCCCTGGCCCGGAAATTTACGGGCCCCGTCCCCACTCACCCGTGGGTGAGAATTCTCCCCCGGCCCTGGCCCCGTAGGGGCGGCTCCCTAGCCCCAACAGGAAAAATGCCACCCCTATGTATCCGCTTTGACCAAACCATATGTTAGAGTGGCCACCTCTCCCTTAAACTTTAACTACAGCATCTGGACTAGTATAGTCCCAAGCGTATTATGGTTATTTTGTAAATTCTCTCGTTGAGATGGCAAAAACAATAAAATATTGTAGGCGGGGCCTTAAAAAAGAATACAAAAAATCACATTTTTAAATGCCTATAGCGACGAGGCACGTTTTTCCTCTCCAACAAAGACCGTATTTTTGGAATATCTTCTGATAAATTTTTTAATTTATATAAATTAGTATGCAATGCAACTATACAATTTTCTAAAGGTGGAAAACAACTAACTACATGCATAGCATATGTTGGACATGTTCGACTTACCTATACAATTCTCACTGCCACCTTATTGCTAGCTGCTACAAAAAATGAATTGGTGCAGACAACGGGGTAACACTATACTACCTCCGTCAGGTTATAAGACTTTCTAGCATTGCCCAAATTCATATTCATTAACATATATATGAATGTGAGCAGTGTTAGAAAGTCTTATAATATAAAACGGATGAAGTATTATAATATAAAACGGATGAAGTATTAGATAGCTGAACAAGTCCACTACCCATATATAAACTAGTATACATAACTAGAACTAGAATCGTGTCTTTTTGGGATAGAGGAAGCAGTAGACTACTTGAACATAAAAGCCATGTTCAGCCGGAGGACCCAAAGTTGCCGATGGACCACAACATTGTACTTTGATTTCATGATTAATTTTAGGCCGGTCATTGCTCGTGTCCTTGTTCTACGCCTACGTTAGCTGTCTAAAAAACCTACACTGCCAACGATTTTTAAAGAATTAATCAACTCCATGTATAATTTGTGAATTGTGGGCAGTTTTGTATCGCTGGTCCAGCAGCTTTGAACACAAGCACGGAGACGCAATTCTGGCATCCTGCGGGGAGGAAAATGCAGCGGCGGTGCAGTACTCTCCCCGGATCCGCATCCAGATCCTCCCCCGATCTCGATGGCATCTGGACAAAACTCCCGCGGGCCCCACCAACTGATGCCGGCCCCACCAACTGATCTCCCACTGTGTACCAGTCGCTGTGCCCGCTAGCTCCCCCAGTCTCCGGGGAGACCGACCGTGCGAGATCGCGACAACGTAGTGCGGCGCTCGCTCTCGCTCTCCCCCGCGGCAGAGTCAGGCGCCGCCCGGCGAAGCGCGAGGCCCGCGGAGCAATGGCGAGTCACGGAAAAGCCTCACTCGCTCTTCCTTGCGCGCTTTGCCTTGCGCGCGCTCTAGTTTCGTGAGATCAGCTATTTCCTCATTCTTATTTCACAGGATTTCAAGGGGTTCTGGGAGTCCAGATTCGGGGGCAAGAAGGAGCAGGAGCCGGAGCAGAACGGGCACGCCAATGGGGTGGCGAACGGGAGCGTCAGGAAGAGGACGTCCGATTTGGCGGTCTACGAGCAGTTCGAGCAGCAGGTATTTCCGTGCGTTAGCGATCCTCTTTTGGTATGGAATGGTTTGCGTGCATGCAGGTGTTCTTGGACAGGCGTCTCGTCTCTCGTGTAGTCCTTGATCCTCGATCGGTGTTGCTGTTTCAGGCCAGGCAGACGGAGGTGCGCGCCGCGGCGATTCGCGATGGGAATGCTGATGCGATGTGAGGACTCTTTTCAGTTCATTGTTTTCTCTTTTTTCCTGATGGAATCTCGAAGCAATGCATGTGTGATAGAGCATCTGGCTGGGGATTGCTTATTAGATTAGATCTGAACTTTTAGGTTTGAATTAGCCTCGTTTTTGTAAGAAAGGGATTTTGATTCGCTGAAAATTCAGAGAGATCTAACCATCGTACTACTTTGGACTGGAATATGTAACCATTGGCACTTCATACAGACAAGATGTTAAGTTCCTTGAATCATGGATGTGTGATCCTGTTCTTCAAAGGAGTAGCATCAGAGGAACCTTAGAGCTAGAAAAAGGTTGTGTAAGGAAAAATCCCTGCTGATGAACATTGGTGAAATTATCCTGGAAAGATACCAAGCTGATAATTTGGTTTGGACTTGTGGCTTAAGCATTATATCTCACCCTGCTGATGAAGGCTAGATTAAATTGAATTAGGGCGTGCAGGCTTTCTTCTGCCTTGTCAAAAGCCTATACAAGATTGACATGCAGTTTATTTGTTAAAGGAAATAGCATCAATCATCTTTAAATATGCTTAAAGTAGCACACAACAAAGTGGCAAACTAACATATGAAAAATCATAGATACTAACACTCTAAAGTCTCGGTGATTCATTACTGGCATTTCAAGACACTTATTCCTGAAATAATGCTTTTCTCATGGCCAACTTTGATTTATTAAGACATTAACTCAATAAAATTATGCTCTCAAACATTACGATTTTGGAGTTTTCTTTTGCAGCCAGAAGCCCCTCCTACCTTCGTTTGAGTCAGCTGAAATGCGTAATCTTGCAGAGACATTGTTGCGGTAATTCAAGATTCACAAACTTTCGAAAAATAGGAAAGCACAAATTTGGCCATTGACTATATATTCTTGCCTTCATCTTTCAGGGACATTATTCGCGGCAGTCCAGATGTGAAATGGGAAAGCATCAAAGGACTGGAGAATGCCAAACGCCTTCTAAAAGAGGCAGTTGTCATGCCCATAAAGTATCCCAAGTAAGTTAGCTGTTTCATGTTTATTGGAATAGAAGGACATGGTCTCATACTGTAATTTACAGCTGTACAATAATTCAGCCTTTCACTAGCGGTAGACTGGTGGTATCCAGTATTTAGAGGCCAGTTATCTAGCTCTATATTGCAAATGTACAAAATATGTTTTGTGTGACATACAGATAATCAATCAATCTATCAGTTATTCATAATCATATTTTGGACTATTTCAGATACTTCACTGGTCTCTTGTCACCATGGAAAGGCATTTTACTTTTTGGTCCCCCAGGAACTGGGAAGGTTTGTATATGCGCTTGATTGATATGTTACTTCTGCTAATTGGTCGAGTACATCTATGGAGTATAGCAATACTTTCTTACCTTTTCCTATATTTGAATGCAACCTCTTAAGTAGGTGTCCCTAACTACTTATCTAGTTTATAAAGTACAATAACATATAACCTTAACTCCTTAAGATGTTTAACCTAATAGCATATGACCTAAGGATTTGTGAACCGACAAACTCATTTAATGATTGGCAAGCTACCTCTAACAACTGACATTCACCACTGGCGATGGGGTAATTTTTTTTTTTTATGAACATACATCGTTATTTTGTCATGCTATATTTGCATTGTGAGTACTTTGAAATTTTCTGATTTTGCAATATCTCTGTCTATTACTATATACTTCGGTAGTCAGTTTCAAGCAATTCCTATTTGCAGACAATGCTGGCAAAGGCTGTTGCTACTGAGTGTAAAACTACCTTCTTCAACATTTCAGCATCATCAATTGTTAGCAAATGGCGTGGTATGTTTCTTTGAACACCTGGTCCTGACCCCATCTTTCTTTTATTGCACAGAAAACAAGTTGTTTTTAGCTATTCTTTTTTGTAGAGTTGTCCTAGTTGTTCTCTCTTTGACCATTTAGTTTCTATGTTCGCTGATAGTGATAAGAGGGCAAGAGGCAGTAGTTAATTAGTGAGTTCTTGTTGTCATCCTCTTTTTCATCAAAGACACAGACATCCTGGTCGTTGTTGAAAGTTTTTTCCTCCTGTGCTCCCACACAATTATTTTGATCAATCTAATTCAATCATGGAACTTAAAACTTTTGATCAATAGAAGTATTTAAATATTTAATTTTAATGTTGGTATTTTTCTGTGTGCGCGCTAATGCAGGGGATTCAGAGAAGCTAGTTAAAGTTCTGTTTGAGCTTGCTAGACATCATGCACCATCGACAATATTTCTTGATGAAATTGATGCTATTATCAGCCAACGTGGTGAAGCTCGCAGTGAGCATGAAGCTAGTCGACGCTTGAAGACTGAGCTACTCATTCAGGTTTCTGCTTGTTTGAACATATCAAAATTAAGCTTGCTAGTGTAGCACTCCAAGTCACGGTTTCCTACTTCATAATCTTTCAGCTTGAAACTGTCCCAACTCCCAACAAACAATACGTCAGATTTCAAAGTTTCTATATTTCTGTCAATGTTTACTGCAGATGGATGGCTTGACAAAGACGAACGACTTGGTATTTGTACTTGCAGCAACAAATTTACCTTGGGAACTGGACGCAGCTATGCTCCGCCGGCTTGAGAAACGGGTACATTTTTTTTACATTCCGGTACTATAGTCCAATAAGTAGGGGCGGGATTAAATTTGTAAATCTTCTTTGTAATAGTCATTTGAGCTTTGCCTTGGATGGATTTTCTTTTCTTGGTGCATACTTTAGCCTAAAGAAACTTATTTTAGGACATTTGATAATGCTCACTAAACATTTGAAAATTTTGTTGTAACCTTGGTGCCTTTGGTCGTCAGATTCTCGTACCTCTTCCTGAGGCTGAAGCAAGGCATGCTATGTTTGAGGAACTTTTGCCATCAACTACCTCAAAGCTAGAGGTTCCATATGATACTTTAGTTGAGAAGACTGAAGGGTACTCTGGTTCAGATATCCGTCTTGTGTGCAAAGAAGCTGCCATGCAACCACTAAGACGTCTTATGTCAGTTCTTGAAGCCAGAGATGAGCTGGTGCCTGAGGAAGGTTAGTTTTGGTTCTTTTCTCAGTGGTGCTATTTTTTTTTTCTGATGAAATTATACCACTGAACTGAAAAAAAATTCATGCTATTGTTACACATTTTTATGTGATACCTTTTCTCTTGGGTTGCAGAATTGCCCGAGGTTGGTCCTCTCAAACCTGAAGACATCGAAGTTGCTTTGAGGAACACAAGGCCGTCTGCGCATCTCCATGCACATCGCTATGAGAAGTTTAACCAGGATTACGGAAGCCAGATCCTTAGTCAGGAGCAAGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004486

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004486&oldid=42210"