BGIOSGA004494

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Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004494| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004494, complete gene.| tag = P0460E0...")
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Gene Name

BGIOSGA004494

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004494, complete gene.

LocusTag

P0460E08.18

Ensembl Transcript ID

BGIOSGA004494-TA

Ensembl Protein ID

BGIOSGA004494-PA

Length

2604

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35268051..35270654

Sequence Coding Region

35268051..35268357,35268473..35268718,35268809..35268925,35269019..35269173,35269293..35269367
,35269463..35269729,35269819..35270139,35270241..35270654

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35268051..35270654 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35268051..35270654 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTATGGCAGGCAAGGCACTTTCTAATAATAAAGCATGTGCCGCTCCCTAATTATGCTCCCCCTCTTCCCCGGGGCTTCTTCTTACCGCGACAATGCGGACGATCGATCGAACCACCCGGTTCTTGGATTACCGGGACAAACAACAATCATCATCACCTCGGGATTAATCATTTCAACCCTCCCCTTTTTGTTCCTTCTCGTGGCTCTCTCTGCGTGGGTGTTCTGCAGCGCCAATCCTGGATCATCATCGTTTGCTTCTGCACACGTCGCTCGAGGCCGCAGAAAGCTGGGTCCTTTACAGAAGCTGGCCACGGTGGAGTTGATCGGTTGATGGCAGCGAGCGGCGGTGGGTCGCTGCTAGAGAGACGAAGCTCGGTGCGACGGTCGCAGAGTATGGTGAGCGAGGAGGGCCGGGGCACGCCGGCCGATGAGGATCTCGGCGGCGGCGGCACGCTCAAGATTGGCGCCGTGCTCGACAAGGACAGCGCGGAGCCCAAGTCGCGGCTCGCCAAGGACACCGGCGAACACGGCGGCGGAGGACCTTCCGAGATGGAGCTGATGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGGGAGGACATGTCGGGGTCCGGGAAGGGCGTGCCGTCGGCGCTGGCCGTGTCCAACGCCATCACCAATCTTGCAGCTTCTGTGTTTGGTGAGCAACGGAAGCTGGAGCCCATGGCGCCGGACAGGAAGGGGAGGTGGAAGAAAGAGGTCGGCTGGCTTCTATCCGTCGCCGATCACATCGTCGAGTTCGTCGCGAAGAAACAAGTCTTGGACAACGGCGTTGAGATGGAGGTGATGGGCACGCAGCAGCGGAGAGATCTCCAGGCGAACATACCGGCGTTGCGCAAGATCGACACGATGCTCCTGGATTACCTGGACAACTTCAAGGATCGGAACGAGTTCTGGTACGTGAAGCGCGACTCGTGCTCGGATAGCGACGAGCAGAGATCAGACGAGAAATGGTGGATCCCGATCGTGAAGGTCCCGCCTGGCGGGCTCTCGCCGGCGTCCAGAGGGTGGCTCCAGCACCAGAAGGAGCTGGTGAACCAGGTGCTCAAGGCGGCCATGGCCATCAACGCCAACTGCCTCATGGAGATGGCCATCCCGGAATCCTACCTCGAATCCCTCCCCAAGAACGGGAGGGCGAGCCTCGGCGACGCGCTGTACCGGATCATCACCGACGTGGAGTTCGACCCGGACGTGTTCCTGTCGACGGTGGACCTTACGTCGGAGCACAAGATCCTGGACCTCAAGGACCGGATCGAGGCGTCGGTGATCATCTGGAACAGGAAGGTGCACAACAAGGACGGCAAGTCGGCGTGGGGATCGGCCGTCAGCCAGGAGAAGAGGGAGCAGTTCGAGGAGCGCGCGCAGACGCTCCTGCTCATCATCAAGCACCGGTACCCCGGCATCCCCCAGTCCACCCTCGACATCGCCAAGATACAGGAAAACAGGGACGTCGGGTTCGCCATCCTGGAGAGCTACTCCAGGGTGCTGGAGAGCTTGGCCTTCAACGTCATGTCCCGGATAGAGGACGTCCTCAACGCCGACGACCACGCCAGGGAGAAGGCCAAGAAGGAGGCGCCACCGGCGCCGGCTATGGCCAACGACGCCGCGGAGCACCACCACCAGCAGGCTGGCGAGGTGGATGCCCCCTGCAAAATGACAGGGTCACCCAACGGCAGGACGCTGCTCGACTTCATGGATGACTGGAACGGTGACGCCGATAGGCCCTCGCCGACGGCGCCTGAGCCGGCCGCACAGGAGGACGGGAGGCTGATGAAGCTGCCCAACATCATGACGAACCTGAAGCAGACGTACATGGACAACCTGTTCGGGGCGCATAGAAGCCCACCAGGTCGCCATTAA</cdnaseq>

Protein Sequence

<aaseq>MALWQARHFLIIKHVPLPNYAPPLPRGFFLPRQCGRSIEPPGSWITGTNNNHHHLGINHFNPPLFVPSRGSLCVGVLQRQSWIIIVCFCTRRSRPQKAGSFTEAGHGGVDRLMAASGGGSLLERRSSVRRSQSMVSEEGRGTPADEDLGGGGTLKIGAVLDKDSAEPKSRLAKDTGEHGGGGPSEMELMKEKFAKLLLGEDMSGSGKGVPSALAVSNAITNLAASVFGEQRKLEPMAPDRKGRWKKEVGWLLSVADHIVEFVAKKQVLDNGVEMEVMGTQQRRDLQANIPALRKIDTMLLDYLDNFKDRNEFWYVKRDSCSDSDEQRSDEKWWIPIVKVPPGGLSPASRGWLQHQKELVNQVLKAAMAINANCLMEMAIPESYLESLPKNGRASLGDALYRIITDVEFDPDVFLSTVDLTSEHKILDLKDRIEASVIIWNRKVHNKDGKSAWGSAVSQEKREQFEERAQTLLLIIKHRYPGIPQSTLDIAKIQENRDVGFAILESYSRVLESLAFNVMSRIEDVLNADDHAREKAKKEAPPAPAMANDAAEHHHQQAGEVDAPCKMTGSPNGRTLLDFMDDWNGDADRPSPTAPEPAAQEDGRLMKLPNIMTNLKQTYMDNLFGAHRSPPGRH</aaseq>

Gene Sequence

<dnaseqindica>1..307#423..668#759..875#969..1123#1243..1317#1413..1679#1769..2089#2191..2604#ATGGCGCTATGGCAGGCAAGGCACTTTCTAATAATAAAGCATGTGCCGCTCCCTAATTATGCTCCCCCTCTTCCCCGGGGCTTCTTCTTACCGCGACAATGCGGACGATCGATCGAACCACCCGGTTCTTGGATTACCGGGACAAACAACAATCATCATCACCTCGGGATTAATCATTTCAACCCTCCCCTTTTTGTTCCTTCTCGTGGCTCTCTCTGCGTGGGTGTTCTGCAGCGCCAATCCTGGATCATCATCGTTTGCTTCTGCACACGTCGCTCGAGGCCGCAGAAAGCTGGGTCCTTTACAGGTATATACACTTTGGGTAGTATCATGGTGGGATTTCCAGTCTTTCCGACGTGTCGTGTCACCGGATCCATTTCTTTGTTGCCGTTGTTGTTGTTGCTGTTTGGTTGGTTGCCGAGAAGCTGGCCACGGTGGAGTTGATCGGTTGATGGCAGCGAGCGGCGGTGGGTCGCTGCTAGAGAGACGAAGCTCGGTGCGACGGTCGCAGAGTATGGTGAGCGAGGAGGGCCGGGGCACGCCGGCCGATGAGGATCTCGGCGGCGGCGGCACGCTCAAGATTGGCGCCGTGCTCGACAAGGACAGCGCGGAGCCCAAGTCGCGGCTCGCCAAGGACACCGGCGAACACGGCGGCGGAGGACCTTCCGGTAAGTCGTCGCCATGATCGAACACGGCCCGCCGCCGCGCATGGACAGAACGGCTTTGGTTTTGAAGCGACGCTAGACGCTTGCGTGCAGAGATGGAGCTGATGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGGGAGGACATGTCGGGGTCCGGGAAGGGCGTGCCGTCGGCGCTGGCCGTGTCCAACGCCATCACCAATCTTGCAGGTAAGGTGACTGCCTGCCCAAATTCCATCTCTATCTTGGGGGGGCACACGCAAGAAATGTAGCAGTGGTGAGAGCAACTTCTTTTGTCATCAGCTTCTGTGTTTGGTGAGCAACGGAAGCTGGAGCCCATGGCGCCGGACAGGAAGGGGAGGTGGAAGAAAGAGGTCGGCTGGCTTCTATCCGTCGCCGATCACATCGTCGAGTTCGTCGCGAAGAAACAAGTCTTGGACAACGGCGTTGAGATGGAGGTCAGCCATGCAGCAGCGGCAGCCGCTTGTAGCTCAGGATAGATCACAGCTCACACAAGTCACAGGTGTGCAGCTCCATCAAGTAACCTGCTATCTTTCTCTGTCTCTGCTCGTCTCAGGTGATGGGCACGCAGCAGCGGAGAGATCTCCAGGCGAACATACCGGCGTTGCGCAAGATCGACACGATGCTCCTGGTAAAAGCGCGACATACATCGATCTCACCATCGCTAGAACTCGCAAAGCTACCGAGACGAACAGCGTGATATTCCCCCATTGCGTTGCGTGGCAGGATTACCTGGACAACTTCAAGGATCGGAACGAGTTCTGGTACGTGAAGCGCGACTCGTGCTCGGATAGCGACGAGCAGAGATCAGACGAGAAATGGTGGATCCCGATCGTGAAGGTCCCGCCTGGCGGGCTCTCGCCGGCGTCCAGAGGGTGGCTCCAGCACCAGAAGGAGCTGGTGAACCAGGTGCTCAAGGCGGCCATGGCCATCAACGCCAACTGCCTCATGGAGATGGCCATCCCGGAATCCTACCTCGAATCCCTCCCCAAGGTGAGAACAGGCAGCTCACACGATCCATCCATCCATCCACCGTGCAAGAAGACATCTGTTGACAATGGCAAGAATGTGGGTGGCTGCAGAACGGGAGGGCGAGCCTCGGCGACGCGCTGTACCGGATCATCACCGACGTGGAGTTCGACCCGGACGTGTTCCTGTCGACGGTGGACCTTACGTCGGAGCACAAGATCCTGGACCTCAAGGACCGGATCGAGGCGTCGGTGATCATCTGGAACAGGAAGGTGCACAACAAGGACGGCAAGTCGGCGTGGGGATCGGCCGTCAGCCAGGAGAAGAGGGAGCAGTTCGAGGAGCGCGCGCAGACGCTCCTGCTCATCATCAAGCACCGGTACCCCGGCATCCCCCAGTCCACCCTCGACATCGCCAAGATACAGGAAAACAGGGTAAGATCACACACGATTTTACTCCAGTGTGAGCCGTCCGACCAATGTCGGGGTAGTGTCCAGCTTGATGACAGACGCACTTTTCGCCTTTGGGCTGCCAGGACGTCGGGTTCGCCATCCTGGAGAGCTACTCCAGGGTGCTGGAGAGCTTGGCCTTCAACGTCATGTCCCGGATAGAGGACGTCCTCAACGCCGACGACCACGCCAGGGAGAAGGCCAAGAAGGAGGCGCCACCGGCGCCGGCTATGGCCAACGACGCCGCGGAGCACCACCACCAGCAGGCTGGCGAGGTGGATGCCCCCTGCAAAATGACAGGGTCACCCAACGGCAGGACGCTGCTCGACTTCATGGATGACTGGAACGGTGACGCCGATAGGCCCTCGCCGACGGCGCCTGAGCCGGCCGCACAGGAGGACGGGAGGCTGATGAAGCTGCCCAACATCATGACGAACCTGAAGCAGACGTACATGGACAACCTGTTCGGGGCGCATAGAAGCCCACCAGGTCGCCATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004494

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004494&oldid=42218"