BGIOSGA004525

From RiceWiki
Revision as of 11:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004525| Description = Japonica Group Os01g0769100 (Os01g0769100) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA004525, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004525

Description

Japonica Group Os01g0769100 (Os01g0769100) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA004525, complete gene.

LocusTag

NM_001050905.1

Ensembl Transcript ID

BGIOSGA004525-TA

Ensembl Protein ID

BGIOSGA004525-PA

Length

2853

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35746614..35749466

Sequence Coding Region

35746614..35746928,35747025..35747206,35747420..35747495,35747598..35747755,35748752..35748923
,35749002..35749112,35749383..35749466

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35746614..35749466 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35746614..35749466 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCAGAGCTCGCTCGCGCGGCCGTTGCCGCGGCCCCCGATCCGGCCGGCCTGCGGGAACCCTGTCTGCCGGAGCCGGCCCGGCTCGGTCTCCGTGGCCCGGTGCCGCGCGGAGGCTGCGCCGCCGGCTCCGGCGCCGGCGGCGCGTAGGGCGGCGGGGCCGTACACCGGGAGGGACCCGGAGGTGAAGAAGCCGGCGTGGCTGCGGCAGCGTGCGGCGCAGGGGGAGAAGTACGCGCGGCTGCGGGAGTCGATCGGCGAGCTCAAGCTCAACACCGTCTGCGTCGAGGCCCAGTGCCCCAACATCGGCGAGTGCTGGAACGGTGGGGGAGGGGCGGGCGGGGAAGGCGACGGCATCGCCACGGCGACCATCATGGTGCTCGGTGATACCTGTACGCGCGGCTGCCGTTTCTGTGCCGTGAAGACTAGCAACAAGCCTCCACCACCGGATCCCCTGGAGCCTCTGAACACGGCCTTGGCAGTTGCAAGCTGGGGTGTGGACTATGTTGTACTGACCAGTGTTGACAGAGATGACTTGCCTGATGGTGGTAGCAGCCATTTTGCGCAGACAGAGCTCAAACCTGGGATACTGGTGGAGTGCTTGACCTCAGATTTTCGAGGTGACCTGGAGGCTGTTTCAGCTTTGGCCAACTCTGGTCTGGATGTATTTGCGCACAACATCGAGACTGTGAGGAGCCTGCAAAGAATTGTTAGGGATCCTCGAGCAGGATATGATCAGAGCTTAGCTGTTCTGAAGCATGCAAAAAGTTGCAAAGAGGGTATGATAACTAAGTCCTCTATCATGCTTGGTCTTGGAGAGACTGACGAGGAGGTGAAACAAGCCATGATTGACTTAAGGGCCATTGGTGTTGATATCTTGACACTGGGCCAGTATTTGCAGCCCACTGAAAGACATTTGACAGTAAGGGAGTATGTAACTCCTGAGAAGTTCCAATTTTGGAAGGAGTATGGAGAATCGGTGGGTTTCCGCTATGTTGCTAGTGGACCCCTGGTTCGGTCTTCATATCGTGCAGGAGAGCTCTTTGTCCAAAATTTGGTCAGGAATAACAAACCTAAGCTACCTGCTTCATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MMQSSLARPLPRPPIRPACGNPVCRSRPGSVSVARCRAEAAPPAPAPAARRAAGPYTGRDPEVKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEGDGIATATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDRDDLPDGGSSHFAQTELKPGILVECLTSDFRGDLEAVSALANSGLDVFAHNIETVRSLQRIVRDPRAGYDQSLAVLKHAKSCKEGMITKSSIMLGLGETDEEVKQAMIDLRAIGVDILTLGQYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNKPKLPASS</aaseq>

Gene Sequence

<dnaseqindica>1..315#412..593#807..882#985..1142#2139..2310#2389..2499#2770..2853#ATGATGCAGAGCTCGCTCGCGCGGCCGTTGCCGCGGCCCCCGATCCGGCCGGCCTGCGGGAACCCTGTCTGCCGGAGCCGGCCCGGCTCGGTCTCCGTGGCCCGGTGCCGCGCGGAGGCTGCGCCGCCGGCTCCGGCGCCGGCGGCGCGTAGGGCGGCGGGGCCGTACACCGGGAGGGACCCGGAGGTGAAGAAGCCGGCGTGGCTGCGGCAGCGTGCGGCGCAGGGGGAGAAGTACGCGCGGCTGCGGGAGTCGATCGGCGAGCTCAAGCTCAACACCGTCTGCGTCGAGGCCCAGTGCCCCAACATCGGCGAGGTACGCGATTCAGTCGTATCGTATGGGACTAGAGCAAGGTGATCCTCGCGAGCAATTTCTGCGAGAACAGCTAAATCCTTTGCTCCTGGGGCGCAGTGCTGGAACGGTGGGGGAGGGGCGGGCGGGGAAGGCGACGGCATCGCCACGGCGACCATCATGGTGCTCGGTGATACCTGTACGCGCGGCTGCCGTTTCTGTGCCGTGAAGACTAGCAACAAGCCTCCACCACCGGATCCCCTGGAGCCTCTGAACACGGCCTTGGCAGTTGCAAGCTGGGGGTATGGTAACTTTGCCTGTTCGCTCCATCTCCAGATTAGCCATTTATGCCTTCCGAATTGTCTGAGTTACTGATCGATGGAATGATAGTTGTAGGAAGGAACAGAGATAACAGTGCATTTTGTTAAGTCTGGAAGTAAAGAAAATCAATGCACATGCACTTGTTTGTGTGGCAAAATTAGTACAGATTGTCTGACAAATGTTGCTCTTTTCAGTGTGGACTATGTTGTACTGACCAGTGTTGACAGAGATGACTTGCCTGATGGTGGTAGCAGCCATTTTGCGCAGACAGTGAGAGCTTTAAAGGTTTACTACCTTATGCCTTGTGTTGACAGAAGTTGGGCATTTATTTGTAGAAGTTTCATGCTGAAGTTTTCTGAATTTCCTATTCAGGAGCTCAAACCTGGGATACTGGTGGAGTGCTTGACCTCAGATTTTCGAGGTGACCTGGAGGCTGTTTCAGCTTTGGCCAACTCTGGTCTGGATGTATTTGCGCACAACATCGAGACTGTGAGGAGCCTGCAAAGAATTGTTAGGGATCCTCGAGCAGGGTAATGTGATTCACTGATTTTACTGGCACACTATTATATCCTGCTTAGGACTATTTGTACATTTATAATTTAGAGAATCAATAACCAATTCACCCAAGGCATCACCCTAATGAAATTACTTCCTACTGGAAAGGAACATCTAAACTGTACCTAGTTCCAGATTTTCATTTACACTACAGGTACATGAAATCTACATAATCCAAACTTTGAATAATATCCACATGCACATGTTGCATGCGCTTTTCTGTTAAAAGTTAAAACTAATTCCATGTGGTTTACTCTATTCAATGGAGTACCATTCTATTCAGGTTATTGTTTTTTACAAGACTGATGTGCCCAGTCATGTCTTAAACTGACCTAAAAAGACAAATTAACACTGCGTTCGAGTATTCTGTCCCTGGCATCAATTTTACAGCTTGACTATATGATCATTCTCAGGCTATTGGTGTGTCTTAGTTTAAGTGATTAATCTTAAATTCGCCCCGAGTAAAAATGAATCTAATTATTATTGAGCTATGCATACTTTACAGTGTAATAGTGCTTATATATAGGTTGCAAATTGTTGTCTCTGAAGTGTAAACTATATTGTAGACTGTAACATTGCAAAATAAAAACAGCCATAGATATTTTCTATCTGATGACCTGCATATTCCTTGCTGTATTTATTGTATGAGACATAACAATAGTTTTGCAAATATCAAAGCTTTGCAATCTGTTTGATTGGTGAGTTGCGGTACTCTTATTTATTTCTGAACGTTTCTCGCATCATAATCTTGGGAGATGATTTATTTTGCCTGATCAACTACCTTTCCCTTAGAATCTGTTCGAAGGAAGTATAGTGGTAGGATATAGTTTATCCGGTTTATCCTCGATTTTGCGCATACACTATATTTCTAGTATCTCGTGGCAATGTGCAGTTAATAACTTGTACTATGCACAGTTCTTTTCCTCATATCCTCTGGCATTGTAAGAATTTTTCTTACCTCGTTCTTACAGATATGATCAGAGCTTAGCTGTTCTGAAGCATGCAAAAAGTTGCAAAGAGGGTATGATAACTAAGTCCTCTATCATGCTTGGTCTTGGAGAGACTGACGAGGAGGTGAAACAAGCCATGATTGACTTAAGGGCCATTGGTGTTGATATCTTGACACTGGGCCAGTATTTGCAGGTTAGCCCAGTACCACTTTATCATTAGTCAAGAATAACTGGTCAGTCTTTGATGCAAACCATCTGCTTGATCTTACAGCCCACTGAAAGACATTTGACAGTAAGGGAGTATGTAACTCCTGAGAAGTTCCAATTTTGGAAGGAGTATGGAGAATCGGTGGGTTTCCGCTATGTTGCTAGTGGACCCCTGGTAAGTGCTACATCTAATTAGTGGGACTCTTCAGTTGTCACCCTTAAAATTGTAAATACAAATAGGAAAATTGTAGTACTGTATAATTTGCTCTGACAAATATCAGTATGATGCATGAGTAAAGTTCTGGAAATTTAGTGAAGAACACAGCTACCAGTGCTATTATTATTTGTTGTACGATTCTGTAATCGACTAATACGTAGGAATGTTGGATAACCAAGTCAGTGTCTTACATGAGCTTATTCTCTATTTTGTGATTTTTTTTTTCAGGTTCGGTCTTCATATCGTGCAGGAGAGCTCTTTGTCCAAAATTTGGTCAGGAATAACAAACCTAAGCTACCTGCTTCATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004525