BGIOSGA004619

From RiceWiki
Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004619, complete gene.| tag = OsI_040...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004619, complete gene.

LocusTag

OsI_04088

Ensembl Transcript ID

BGIOSGA004619-TA

Ensembl Protein ID

BGIOSGA004619-PA

Length

2525

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37283526..37286050

Sequence Coding Region

37283526..37283963,37284575..37284652,37284742..37284903,37285168..37285485,37285628..37285786
,37285856..37286050

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37283526..37286050 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37283526..37286050 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGTGGCCGCTACCACTTTCCCCTCCATGACCCGCCCCGCGGCCCGCGGGATCGTGGCCGGCGCCGCCGCCTCCACCGTGCCGCTTCCCCGCGCTGGCTTTGCCTCCCCGTGCCCGACGGCGCGGTCGCTGGGCTTCGCGGCCCGCGGGACCGACCCGCGGCTGGCGATCCACGTCTCGTCGCGGCGTCGAGCGGCCTCGGCGTCGGCGGGGAGCCGCCTGGCGCGCGCCGTGGCGACGATGGCGAAGAAGAGCGTGGGCGACCTGGCAGCCGCGGACCTCGAGGGGAAGCGCGTGCTCTTGCGCGCCGACCTCAATGTGCCCCTCGACGCCAGCCAGAACATCACCGACGACACCCGAGTCCGAGCCGCCATCCCCACCATCAAACACCTCATTGGCAACGGGGCCAAGGTCATCCTTTGCAGCCACTTGGGCCGTCCTAAGGGTATCACTCCCAAATTTAGCTTAGCTCCTCTTGTACCAAGGTTATCTGAACTTCTTGGCATACAGGTTCAAAAAGCAGATGATGTTATTGGTCCAGAAGTTGAGAAATCGGTCTCTGTGCTGCCAAACGGCAGTGTTTTACTGCTTGAAAATGTCAGATTTTACAAGGAGGAGGAGAAGAATGACCCAGAGTTTGCGAAGAAGCTTGCCTCCCTCGCTGATCTTTATGAGCTTGATTACCTTGTTGGAGCTGTTTCAAACCCCAAGCGGCCATTTGCGGCTATTGTAGGTGGTTCCAAAGTGTCATGTAAGATTGGAGTTATTGAATCACTCTTGGAGAAGTGTGACATCCTTCTATTGGGTGGCGGTATGATATTCACATTTTACAAAGCACAAGGATTTCCAGTAGGAGCTTCCTTGGTGGAAGATGACAAACTCGAGCTAGCAACATCTCTCCTTGCAAAGGCAAAAGAAAAGGGTGTATCTCTTATGTTGCCAACAGATGTAATTGTTGCTGATAAGTTTGCTCCTGAGGCTAACTGTCAGGTTGTTTCTGCTTATGCAATTCCTGATGGATGGATGGGACTGGATATTGGCCCAGATTCAGTTGCTGCATTCAGTTCTGCCTTGGAAACTACTCAGACAGTCATTTGGAATGGGCCCATGGGAGTTTTCGAATTTGAAAAATTCGCAGTAGGAACTGAGGCAATTGCAAAGAAGCTGGCTGAGCTTAGTGGCAAGGGTGTAACAACAATAATTGGAGGTAAAGACTCTGTTGCAGCTGTTGAGAAGGTAGGAGTTGCCAATGTTATGAGCCATATTTCAACCGGAGGTGGTGCAAGTTTGGAATTGCTGGAAGGAAAGGAACTTCCAGGAGTAGTAGCATTGGACGAAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MASVAATTFPSMTRPAARGIVAGAAASTVPLPRAGFASPCPTARSLGFAARGTDPRLAIHVSSRRRAASASAGSRLARAVATMAKKSVGDLAAADLEGKRVLLRADLNVPLDASQNITDDTRVRAAIPTIKHLIGNGAKVILCSHLGRPKGITPKFSLAPLVPRLSELLGIQVQKADDVIGPEVEKSVSVLPNGSVLLLENVRFYKEEEKNDPEFAKKLASLADLYELDYLVGAVSNPKRPFAAIVGGSKVSCKIGVIESLLEKCDILLLGGGMIFTFYKAQGFPVGASLVEDDKLELATSLLAKAKEKGVSLMLPTDVIVADKFAPEANCQVVSAYAIPDGWMGLDIGPDSVAAFSSALETTQTVIWNGPMGVFEFEKFAVGTEAIAKKLAELSGKGVTTIIGGKDSVAAVEKVGVANVMSHISTGGGASLELLEGKELPGVVALDEA</aaseq>

Gene Sequence

<dnaseqindica>1..438#1050..1127#1217..1378#1643..1960#2103..2261#2331..2525#ATGGCGTCGGTGGCCGCTACCACTTTCCCCTCCATGACCCGCCCCGCGGCCCGCGGGATCGTGGCCGGCGCCGCCGCCTCCACCGTGCCGCTTCCCCGCGCTGGCTTTGCCTCCCCGTGCCCGACGGCGCGGTCGCTGGGCTTCGCGGCCCGCGGGACCGACCCGCGGCTGGCGATCCACGTCTCGTCGCGGCGTCGAGCGGCCTCGGCGTCGGCGGGGAGCCGCCTGGCGCGCGCCGTGGCGACGATGGCGAAGAAGAGCGTGGGCGACCTGGCAGCCGCGGACCTCGAGGGGAAGCGCGTGCTCTTGCGCGCCGACCTCAATGTGCCCCTCGACGCCAGCCAGAACATCACCGACGACACCCGAGTCCGAGCCGCCATCCCCACCATCAAACACCTCATTGGCAACGGGGCCAAGGTCATCCTTTGCAGCCACTTGGTAAGCCGTAAGACTCGCCATCCCGATACTGAATGTTTTGTTTTTAACCGAGTACTGAATGTTTTCTCAGATATAATGTTGTTTGCATACTTCCAGTTGACTAAAACTTGACAATCAAAATGGTCGGATGGTGAAATTTGTAGGCCTGACAGAGGTTCTAGGCTGTGGATTCAGATGTGGTATCGTATATGCGCTTCTATGAGTGCCCGTGGCCATTAGTGGTGCTGAATATTATACTGTACTACATTATTCCTAGATTTACTATAGATGTTATCAGGACATTACTTGATTACTTCTACATCAGGAATTGAATTATTGTATTCACGGACAGAGAAAAGTGTGCAATTCGTTCTATTGATTTTGAGATGACATGCATACACAGTTGTTTACTTTGTATTAGGAGAAATTAACCTTCTGGTTAGCATGTCCTTGGATCTGGCATTATTGATTTGATTATCGTAGATGCAGTTCATTATGCAGGGGTATGTGTAAATTGTGCTGAAATTTTTTATAATTTACTCCTCACCTGCCTTGTTGGTGAACCTTTTCTTCACATACAAAGTATCATAGATTCATAGTGCCAGTCTGATGAGTAGATTCTTATGATTCAGGGCCGTCCTAAGGGTATCACTCCCAAATTTAGCTTAGCTCCTCTTGTACCAAGGTTATCTGAACTTCTTGGCATACAGGTATCTTTCCTCTGTTACAATGTCAACACTTGGTGTACGCATCTGTACTAATTTATGCTAAGAACATTTGCATTTGCATGCACAATCAGGTTCAAAAAGCAGATGATGTTATTGGTCCAGAAGTTGAGAAATCGGTCTCTGTGCTGCCAAACGGCAGTGTTTTACTGCTTGAAAATGTCAGATTTTACAAGGAGGAGGAGAAGAATGACCCAGAGTTTGCGAAGAAGCTTGCCTCCCTCGCTGATCTTTATGTAAACGATGCATTTTGAACTGCTCATAGAGCGCATGCATCAACTGAGGGAGTCACCAACTACTTGAAGCCGTCTGTTGCAGGGTTCCTTTTGCAGAAGGTTTGCATCTCTTCACTTTTTCGCTAACTCCTGAACTTGGAGTATAAACACTCACCTTTAAAAGAAGAATCATTAATTTCTGCTTCCATTTTTTGTTCCTTCAAAGAGTGTCTGAATGACTGAACCTCTCTATTTTTCTTTTTCATTTTTATAACAAAATCACAGGAGCTTGATTACCTTGTTGGAGCTGTTTCAAACCCCAAGCGGCCATTTGCGGCTATTGTAGGTGGTTCCAAAGTGTCATGTAAGATTGGAGTTATTGAATCACTCTTGGAGAAGTGTGACATCCTTCTATTGGGTGGCGGTATGATATTCACATTTTACAAAGCACAAGGATTTCCAGTAGGAGCTTCCTTGGTGGAAGATGACAAACTCGAGCTAGCAACATCTCTCCTTGCAAAGGCAAAAGAAAAGGGTGTATCTCTTATGTTGCCAACAGATGTAATTGTTGCTGATAAGTTTGCTCCTGAGGCTAACTGTCAGGTTTGTTATAGCTCATGATCAATTAATTACCAATAAATACTGGAAGCTTTTCAGTAATTCCTTCAAAAAAAGAGAAAACTTTCCACCCAAATTTGATGGCTGAAAATCTAAACTTTGATCTGCCCATGGGATTGTTCTTTAGGTTGTTTCTGCTTATGCAATTCCTGATGGATGGATGGGACTGGATATTGGCCCAGATTCAGTTGCTGCATTCAGTTCTGCCTTGGAAACTACTCAGACAGTCATTTGGAATGGGCCCATGGGAGTTTTCGAATTTGAAAAATTCGCAGTAGGAACTGAGGTAATGATTCACTAAAATCCTGTTTGCAGTTGCATGCTAAGAAACATAAACATGAACTGTCTTCTACAGGCAATTGCAAAGAAGCTGGCTGAGCTTAGTGGCAAGGGTGTAACAACAATAATTGGAGGTAAAGACTCTGTTGCAGCTGTTGAGAAGGTAGGAGTTGCCAATGTTATGAGCCATATTTCAACCGGAGGTGGTGCAAGTTTGGAATTGCTGGAAGGAAAGGAACTTCCAGGAGTAGTAGCATTGGACGAAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004619