BGIOSGA004621

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004621| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004621, complete gene.| tag = P0003D0...")
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Gene Name

BGIOSGA004621

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004621, complete gene.

LocusTag

P0003D09.8-1

Ensembl Transcript ID

BGIOSGA004621-TA

Ensembl Protein ID

BGIOSGA004621-PA

Length

6741

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37305067..37311807

Sequence Coding Region

37305067..37305368,37305505..37305592,37308633..37308902,37308996..37309104,37309213..37309330
,37309431..37309563,37309686..37309873,37309946..37310132,37310230..37310297
,37310473..37310566,37310664..37310855,37311036..37311116,37311745..37311807

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37305067..37311807 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37305067..37311807 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCCTCCTTCTGCTGCTCGTGCTCATCGGCGGCATCTGCGCCGCCGCCGCGGCGAGCTCGCCGCTACTCCCGGCGGCGGAGACGATGCGCGTGAGCTTCGCGGGGAAGTCGGAGTTCAGGACGGTGAACAGGAAGCCGCTGGGTACGTGCCTGGACCCGAGCCCGTACCTGGAGATCAGCGTCAGCACCGGCGGGGCGCCGCTCCCCGACGAGGCGTTCCTCAACGTGACCGTCTCCGGCGTCCGCAGGCCCGACCGCTCCCACTGGCTCGCCATGATCACGCCTTCAAACTCCAGTGTCTTGGGGTGCCCTCTGAACGGTGTCAATTACATCGAGACAGGTGATCTGGCGAGCCTCCCTCTTCTGTGCCACTACCCTGTCAAGGCCCAGTACCTGACAAGCGACCCGGGCTACCTGGGCTGCAAGGCCTCGGCGTGCCAGAAGCGCCGCGCGTCCGGCACCTGCAAGGTCCGGACCTGCGCCGCCACGCTGGCGTTCCACGTCATCAACTTCCGCACCGACGTCGAGTTCGTCCTCTTCTCCGGCGGCTTCGCGACGCCGTGCGTCCTCAAGCGCTCCGGTGCGCTCCCGTTCGCCAACCCCGCCAAGCCGCTCCACGGCCACCTCTCCAGCGTCGACTCCAAGGCCACCTCGATGAGGCTTACGTGGGTGAGCGGAGACGCGAGGCCGCAGCAGGTTCAGTACGGGACGGGCAAGACTGCTACCTCTGTCGCCACGACATTCACTCATAAGGACATGTGCAGCATCGCCGTGCTGCCGAGTCCTGCGAAGGACTTCGGGTGGCATGATCCGGGTTACATCCATTCGGCACTCATGACCGGTCTCCAGCCATCTCACTCCTACAATTACCGTTACGGAAGTGATTCCGTGGGTTGGAGTAACACAACCGAATTCAGAACCCCACCAGCTGCAGGTTCAGGCGAGCTGTCCTTCGTGATCTTTGGTGATATGGGGAAGGCTCCACTGGACCCATCAGTGGAACACTACATTCAGCCTGGATCGACCTCCGTGGCCAAAGCAGTAGCTGCAGAGATGCAAACCGGAAAGGTCGACTCGATCTTCCACATCGGAGACATCAGCTACGCCACGGGCTTCCTTGTCGAATGGGATTTCTTCCTTCACCTCATCACGCCGCTCGCGTCGCAGGTGTCCTACATGACCGCCATTGGTAACCACGAGAGAGACTATGCAGGATCTGGATCGGTATATCCGACGCCGGATTCAGGCGGCGAATGTGGAGTCCCCTACGAGTCCTACTTCCCCATGCCTGCTTCCGGTAGGGACAAACCATGGTATTCGATCGAGCAAGGGAGCGTTCACTTCGTTGTGATGTCCACCGAGCACGAGTGGTCAGAGAAGTCAGACCAATACAATTGGATGGAAATGGATTTGTCATCGGTTGATAGATCAAGAACACCATGGGTGATCTTCATTGGGCATAGACCAATGTATTCATCCAGCAGCGGTATTCCGCCCAGCGTTGATCCGAACTTCGTTTCCTCTGTTGAGCCACTCTTGCTTAACCACAAGGTCGATTTGGTCTTCTTTGGCCATGTACACAACTACGAGAGAACGTGTGCGGTATACCAGGGCAATTGCAAAGGCATGCCAAAGAAGGACGCAAAAGGAGTTGATACCTACGATAACAGCAACTACGCCGCACCTGTTCATGCCGTTGTTGGAGCAGGGGGGTTCAACTTGGATGGCTTCCCTAAGATTGGTCTGCATAGCTGGAGCTTATCAAGGATTTCAGAGTTTGGATATGCCAGGGTACATGCGACGAAAACTGATATGTTGGTTCAGTTTGTAAACTCGAACACGTCGGCAGTCCAGGACCAATTTAGGATTGTGAAGGGAGCCAGATGA</cdnaseq>

Protein Sequence

<aaseq>MARLLLLLVLIGGICAAAAASSPLLPAAETMRVSFAGKSEFRTVNRKPLGTCLDPSPYLEISVSTGGAPLPDEAFLNVTVSGVRRPDRSHWLAMITPSNSSVLGCPLNGVNYIETGDLASLPLLCHYPVKAQYLTSDPGYLGCKASACQKRRASGTCKVRTCAATLAFHVINFRTDVEFVLFSGGFATPCVLKRSGALPFANPAKPLHGHLSSVDSKATSMRLTWVSGDARPQQVQYGTGKTATSVATTFTHKDMCSIAVLPSPAKDFGWHDPGYIHSALMTGLQPSHSYNYRYGSDSVGWSNTTEFRTPPAAGSGELSFVIFGDMGKAPLDPSVEHYIQPGSTSVAKAVAAEMQTGKVDSIFHIGDISYATGFLVEWDFFLHLITPLASQVSYMTAIGNHERDYAGSGSVYPTPDSGGECGVPYESYFPMPASGRDKPWYSIEQGSVHFVVMSTEHEWSEKSDQYNWMEMDLSSVDRSRTPWVIFIGHRPMYSSSSGIPPSVDPNFVSSVEPLLLNHKVDLVFFGHVHNYERTCAVYQGNCKGMPKKDAKGVDTYDNSNYAAPVHAVVGAGGFNLDGFPKIGLHSWSLSRISEFGYARVHATKTDMLVQFVNSNTSAVQDQFRIVKGAR</aaseq>

Gene Sequence

<dnaseqindica>1..302#439..526#3567..3836#3930..4038#4147..4264#4365..4497#4620..4807#4880..5066#5164..5231#5407..5500#5598..5789#5970..6050#6679..6741#ATGGCGCGCCTCCTTCTGCTGCTCGTGCTCATCGGCGGCATCTGCGCCGCCGCCGCGGCGAGCTCGCCGCTACTCCCGGCGGCGGAGACGATGCGCGTGAGCTTCGCGGGGAAGTCGGAGTTCAGGACGGTGAACAGGAAGCCGCTGGGTACGTGCCTGGACCCGAGCCCGTACCTGGAGATCAGCGTCAGCACCGGCGGGGCGCCGCTCCCCGACGAGGCGTTCCTCAACGTGACCGTCTCCGGCGTCCGCAGGCCCGACCGCTCCCACTGGCTCGCCATGATCACGCCTTCAAACTCCAGGTGAATGAGAAAATGCATGCAAATCGATTTCATCATCACTGTAAACGTCTATGTTTGAGTTTGATTGGATCGATCTCTTCCTCTGGTAATTAATGCAATTGTGTGCGAGTAAATTAATTCATGGATGCGCATGCAGTGTCTTGGGGTGCCCTCTGAACGGTGTCAATTACATCGAGACAGGTGATCTGGCGAGCCTCCCTCTTCTGTGCCACTACCCTGTCAAGGTGAGTTCTTCCATGCAAAGACAACCGCTTTTTCTATGCTCTTAATTAACTTGATCTAATTTAGCTACTAGTAGCAGTTTGCACCAGTAACTCTTCCACTGTAGTAGGAGGAGGATTTAGTTGCCACACACCAACGTAACCCTGATCAAGCTTGTCGATCAGATCTAGTAGTACGTATATAACGTGACATACGACACTTGCCATATTAAATCCTTGATGATGTCCACCATGTCTGAAGATTTCCTTAAATTGGTTGTTGAGTCCAAGGAAAGACAGCGGCGATAGCAAAATTAATTGGGACATTTCGACAACGACGTGCTAATCAGATCGTTAGTTGCTACACGGTGCAGCAATGCCTGTGCTATATAAGCCTCACATGAATGATCATTCGTGAAGCAATCCTATTTGTCAAGAGCGTCAGGGGCGGCGGACCTAGTTGTCATGGGTCTACATCTGTACACCTAAATACTTTTACAAAAAATTCCAGTATGTATCATGTATTTATACTATGGTTAGATCTAAATAATTGTGTGGTTCCCTCCACCAGAAACACCAGTTTCAACCCAACCAAATCACATGTGGAACTGCCTCTGTTTTAGTGTTTGCTCATAGGCCTCAACTTTTAAATTAACCAATGGTTTCTTGATTAGCTTTATTTTTGAACGAGGATCTTGCTTGATTTACTTTATACACTCATTATGAAATTCCTGCGTTCTCCACTGTCAAGCGTGCTAATGACCTATTGTCAACGTCTCACATGCATGAAGTATATATATATATGGTAACGGCACACACACATGCATGACAGCATGACTCAAATCAGACAACCTCGTAATATCTACTCTAAAACTACCTCAGTCCACACTTTATTCAAAAAAAAATTAATTCTTACCTATAAATCTGAATATAACGTTATCTAGGTTCATTTTTTTTTCTGAGCGAAAAAAATGCCCATACTTATCCATGTTCATAGTTTAAATTTGTTTATTCTTTTTAAGATAGAGGGAGCACCTTATTTGGGTAGAATTTTGTTAATAGAGTCATCAGCAACAACTAGAAAAGTGCTCATGCTTTGTTATAGGTAAAAGACAATACATTACAAAATGCTATAGACAATATATATTTTTTTTATCAAATATGCATGTTACTATCACTTCATTGCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCACTTGTTTGAAATAAATACTGGACTATTCCATAATATCATAAATTATCAATGGCTCATTTATAAAAATTGCAAAAACAAAGGGTGAGTTGGTCGTGGCATATTCAATGTTATCATCATCAGTGGCTTCTAAAGAAGTATATACTCCATCCATTTTATATTATAAGCCGTTTGATTCTTTTATGAAAATTCTTTAGGTTTAATTAAGTTTATAAAAATAATTAGCAACATCCACACCACTAAATTAGTTTTATTAAATTTAATACTAAATATATTTGATACGTTGTTCGTTTTGTATTGAAATGTATTGCTATTTTTTTTTCTATAAACTAGCATGGTGGCCCGCGCAAATTGCGCGGCTAGCATCATTATATTTTCTTTCATATAATAGCATATATATATTTTCTCAATGTATTATTCAAATATATTAGAATGGCAACATAATTTAAATTTTGTACTAACTTTACGAAACTATTAATGTGTAATATTCATATTGTATTTTATATGCGTGTTAGTTATTAATAATTTTAAATATCAAATTTTAGTTATTTGTAAATTATATTCCTATATGGACTCTAGACTCGTCTTTCAATTTTTCTTTTCTTTAATTCCGATTTTTTGTTTTCTGTGAATTGTATTTCTATATAAACTCTAGACTCTTCTTTCAATATTATTTATTTTTAATTCTAAATTTTTATTATTCTAATTGTATTTCTATGTGAACTCTAAACTCATCTTTCAATATTCTTCAATTTTTAATTTCGAATTTCAGTTACTTCTAAATTATATTCTTATATTGACTTTAGACTCTTCTTCCCATGTTTTTTTAATTTCGAATTGTAGTTATTTGTAAATTGTAGTATTTTTATATGAACTCTAAACTCTACTTCTAATTTTATTATGTTTATTCTGAATTTTAGTTAGTTTTAAATTTCTATATGGACTCTATACTCTACTTCTAATATTTCTTATTTTTAATTCCGAATTTCTATTATTTCTTAATTGTATCTCTATACGGACTCTAGTCTCCTCTTCCAATATTCCTTATTTTTAATTCCGAATTTCTATTATTTCTTAATTATATTTCTATATGGACTCTATACTCTACTTCTAATATTCCTTATTTTTAATTCCGAATTTCTATTATTTCTTAATTCTATTTTTGCATGGACTCTAGACTCCTCTTCCAATATTTCTTATTTTTAATTCCGAATTTCTATTATTTCTTAATTGTATTTCTATATGGACTCTACACTCTACTTCTAATATTCCTTATTTTTAATTTCGAATCTATTATATTATTAAAGGAATAGAAAAAGGAGCCTCCACGTTCGCTCTCATGGCCTAAAAATTCTCACATTAATCAGAAATATAATAAGAAAATAATAGAAAAATTCGGAATTTAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAAAAATACAATTAAGAAAAAAAAAGAAATTTAGAATTAAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTTCATATGGGAATTTAAACTAACTAAAATTCAGAATAAACATAATAAAATAAACTTATTTTTAATTCTGAATTTTAACCTTTTCTAAATTGTATTTCTATATGAACTCTGTTTTTCTTTTTCTCCGATTAATATGAGAATTTCTAGGCCGTGAGAGCGAACATGGAGGCTTCGTTTTCTATTCCTTTAATAAGTTAATAGATTAGTTAAACTTTTGACTAAGAAAAAAAATTAAATAATTTATAATATGAAACGAAGGGAGTAGTTGCGATCCAGCCAAAATTTTAACGGGGCCGGGCGTGCAGGCCCAGTACCTGACAAGCGACCCGGGCTACCTGGGCTGCAAGGCCTCGGCGTGCCAGAAGCGCCGCGCGTCCGGCACCTGCAAGGTCCGGACCTGCGCCGCCACGCTGGCGTTCCACGTCATCAACTTCCGCACCGACGTCGAGTTCGTCCTCTTCTCCGGCGGCTTCGCGACGCCGTGCGTCCTCAAGCGCTCCGGTGCGCTCCCGTTCGCCAACCCCGCCAAGCCGCTCCACGGCCACCTCTCCAGCGTCGACTCCAAGGCCACCTCGGTGAGCACATCTACTATCATCCAAAGCTTTTCCACCTTGCTTTTCTGCAGCTTCAAATGGAGTAATTTGTTGCATTTCTGTATGATGAATCAGATGAGGCTTACGTGGGTGAGCGGAGACGCGAGGCCGCAGCAGGTTCAGTACGGGACGGGCAAGACTGCTACCTCTGTCGCCACGACATTCACTCATAAGGACATGTGCAGTGAGTAGTAATTAATCATGTGTTCATCACTGGGAAAATGCAATGTAAAAGAGGATAATTCAATATCATGTTTATTATCTCAAATGGAATGAAAATTCCAATGTGCAGGCATCGCCGTGCTGCCGAGTCCTGCGAAGGACTTCGGGTGGCATGATCCGGGTTACATCCATTCGGCACTCATGACCGGTCTCCAGCCATCTCACTCCTACAATTACCGTTACGGAAGGTACAGGTTCCCCCCTTCTTTTTTCACTTTTTTGCTGTAAAAATTAGCAGTTGTCACTTGTCAGTAACATCCTCAATACGGGCTTGCCGCTGATGTGCAGTGATTCCGTGGGTTGGAGTAACACAACCGAATTCAGAACCCCACCAGCTGCAGGTTCAGGCGAGCTGTCCTTCGTGATCTTTGGTGATATGGGGAAGGCTCCACTGGACCCATCAGTGGAACACTACATTCAGGTACACAAAATCCTACATTCCTGCAAATGTTCCATTTTCACTAGCAGCTCGTACATTTCCGCGTGGTATATTTGCTCTGAGACAACGATGATGATTGGTGTTAAACGATGCAAAATTTGCAGCCTGGATCGACCTCCGTGGCCAAAGCAGTAGCTGCAGAGATGCAAACCGGAAAGGTCGACTCGATCTTCCACATCGGAGACATCAGCTACGCCACGGGCTTCCTTGTCGAATGGGATTTCTTCCTTCACCTCATCACGCCGCTCGCGTCGCAGGTGTCCTACATGACCGCCATTGGTAACCACGAGAGGTGATTCCTGCACCCAGAACACTGTGCATATTCTAGGTGTGGATGACAATGAGCTGATGATGCTTTCATCAGAGACTATGCAGGATCTGGATCGGTATATCCGACGCCGGATTCAGGCGGCGAATGTGGAGTCCCCTACGAGTCCTACTTCCCCATGCCTGCTTCCGGTAGGGACAAACCATGGTATTCGATCGAGCAAGGGAGCGTTCACTTCGTTGTGATGTCCACCGAGCACGAGTGGTCAGAGAAGTCAGACCAAGTAAGTGATCAAAGTCACCTTTCTATTCCTTTTCACTTATTCAGGAGTACATCGTTTACATGTTCATGTCACTCTCCAAATTTTGTTGTGTGAGTAGTACAATTGGATGGAAATGGATTTGTCATCGGTTGATAGATCAAGAACACCATGGGTGATCTTCATTGGGTAAGCTAAATGATCTTTTATTCTTCTAAAAAATATATGTTTGCCTAGAGATCAAACAAACAAAAGATATTATTTTCTGAAACAAAACAGGTAAAAAAATATGTTCCGTACTCCAGAATGCAAATTGTCTGATACTAGAAAGAATTAACACTTGTCACTTCAATGACCGCTGCAGGCATAGACCAATGTATTCATCCAGCAGCGGTATTCCGCCCAGCGTTGATCCGAACTTCGTTTCCTCTGTTGAGCCACTCTTGCTTAACCACAAGGTAAGATTGGAATGCAGCTTTAGTCACACTTAAATCTACCTTCATAAGTTCATAGAATACTAGACTATAGAAGGATGTTTTGATTTATGATGAACAGGTCGATTTGGTCTTCTTTGGCCATGTACACAACTACGAGAGAACGTGTGCGGTATACCAGGGCAATTGCAAAGGCATGCCAAAGAAGGACGCAAAAGGAGTTGATACCTACGATAACAGCAACTACGCCGCACCTGTTCATGCCGTTGTTGGAGCAGGGGGGTTCAACTTGGATGGCTTCCCTAAGATTGGTGTAAGAGTCATATCTACACCTTTGTGTATGTTGTTCTCCTAGGCAATTATAGACATCGTTTCAAACTACATAGTATGGTGGTAACAAATTGATATACTCCTAATTGATAAGAACGCATTAACGCCTGAAAACTCACATACTGTTAAAGTGACAAGCTTGTCTTTCTGTTAAATTGTTCAGCTGCATAGCTGGAGCTTATCAAGGATTTCAGAGTTTGGATATGCCAGGGTACATGCGACGAAAACTGATATGTTGGTTCAGGTCAGTCCACATATATATATTCTACCTCGGTTTCTATTAACACGCTTTTTAAAGTTCTGAACGGTGGATTTTGTGTAAAAACTTTTTACATATAAGTTCCTTTAAAATATAAAATAAATTTATTTTTTAAGTTTGCAACAATTAAACTTAATTAATTATGTACTGATGGTTTTCTTGTTTTTCTTACTTTAACTTTATCTTCATCTTTATTAGAAAAGAATATCACCTGTCTTAACTCTCAATTCTGTCTCTTGTCTAAATTAAATTCTCATAATGAAATATTCCAACTGGTAAAATCATCATTGCTCACAAGTACTTCCTCCGTTTCACAATATAAGTCATTCTAGTATTTCTCACATTCATATTGATGCTAATGAATCTAGACATATATATATTTGTCTAGATTCATTAGCATCAATATGAATGTGGGAATATATGTCTAGATTCATTAGCATCAATATGAATATGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTAGTAAAATAACTATTGCATGGAATGATTGATTTTTTTTTTTAAAAAAATGCTACTATCTGAGTAAGCAATGGTGCATGGCTGCATCTCAAGTCTGAACAACTGTTAATCTCTTTTTTCAGTTTGTAAACTCGAACACGTCGGCAGTCCAGGACCAATTTAGGATTGTGAAGGGAGCCAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004621