BGIOSGA004668

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004668| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004668, complete gene.| tag = P0425G0...")
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Gene Name

BGIOSGA004668

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004668, complete gene.

LocusTag

P0425G02.11

Ensembl Transcript ID

BGIOSGA004668-TA

Ensembl Protein ID

BGIOSGA004668-PA

Length

2421

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37901959..37904379

Sequence Coding Region

37901959..37902046,37902146..37904379

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37901959..37904379 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37901959..37904379 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCCGTGCTAGTGTTGGCCCCTGCATCTGTCAAGTGTCAAAGTTGTCTCTCTTTTTTTTTTTTGAAGTGAATTGTGCGAATAGAGATAGTCAGCTGATACTAGTGAAGATGAACCGGGAATCAAATTTCATGCCTACTCCTGATCAGGATGTTCTGGAAGTCAAGCCCCTGAGGACTTTGGCTCCAATGTTCCCTGCACCATTGGGGGCCGATGTGCTTAACCGGTTGACAGCCCCACCGTTGGTATTTGTCGCACCAGCTGGGCAGTTTCCTGGGGGTTTTGGATCTTTGAACATTCCTGCGGTCAGATCGTTTGCCGCTTTCGGTGGTCAGGATGCTAGTGGAGGCAAGACTGCTGGTGGTGGTGATCAGGATGCTAGTGGAGGCAAGACTGCCGCTGGCGGTGATCAGGATGCTGGTAGAGGCGAGACTGCTGCTTTTGGTGGTCAGGAAACTGTCAGAGGTGAATTTGTTGCAAATGGGACTCCAAATGTAGGTGCTAGTGCAACTGGGCCAATTGACGCCACTCCTATCTCAGCTTGCAAATCAACACAACCAAGTGTGATATCACTGGATGATGATGACAATGATGATGATGAGCCTTACGGTGGTAACCAAACATCAGCATCTGGACGGAAGATCAAGAGGCCATCCCATCTCAAAGGATATAATGTAAGTGATGGTTTGGGCACCGACAGCTCCAACGGAACAAAGAAACGCCCTAAGACCTCTAATAGGAAGGCTGCTACTGACAATGAGATTTCCTTGATGCCTCCATCCAGCGATCCCAGGGAGGTTGTGGAAGTGCTTCTCATGACCTTCGAGGCACTGCGGCGTAGGCATCTTCAATTGGATGAGACACAAGAGACTAGCAAACGTGCAGACCTGAAGGCTGGTGCCATCATGTTGGCCAGTAATCTGAGGGCTAACATTGGGAAGAGGATTGGAGCTGTCCCTGGAGTTGAAGTAGGGGATATTTTCTACTTCAGGATGGAGCTATGCATTATCGGCTTGCATGCACCTAGCATGGGTGGAATTGATTATATGAATAAGTTTGGTGATGAGGATGACTCTGTAGCAATATGTATTGTTGCTGCAGGTGTTTATGAGAATGATGATGATGATACAGATACACTGGTCTACAGTGGTTCTGGAGGTATAAGCAGGAACAGTGAGGAGAAGCAGGACCAGAAGCTTGAGAGGGGTAACCTTGCTCTTGAGAGGAGCCTGTCCAGAAAGAACGTGATCCGGGTTGTACGTGGTTACAAGGATCCAGCTTGCTTGACTGGGAAAGTTTATATCTATGATGGTCTTTATAAGATTCATGAGTCCTGGAAAGAAAGAACAAAGACTGGGATCAATTGTTTCAAGTACAAGTTGCAGCGAGAGCCAGGACAGCCTGATGCAGTTGCAATCTGGAAGATGTGCCAGAGATGGGTAGAAAATCCAGCTGCTAGAGGCAAAGTTTTGCACCCTGATCTATCATCTGGTGCTGAAAATCTCCCAGTGTGTCTTATCAATGATGTTAACAGTGAGAAAGGACCAGGGCACTTCAACTATATTACTCAGGTCAAGTACTTGAAGCCACTCCGCTCTATGAAGCCATTTCAGGGTTGCAGATGCACTAGTGTTTGTCTGCCTGGTGATACCAGTTGTGATTGTGCACAGCATAATGGAGGTGACTTACCGTACAGTTCATCCGGATTGCTTGTATGTCGCAAGCTTATGGTATATGAATGTGGTGAATCTTGCCGATGTTCAATCAACTGTCGTAATAGGGTAGCCCAAAAGGGAGTAAGGATCCACCTTGAGGTCTTCAGGACAACAAATCGAGGCTGGGGTCTTCGTTCATGGGATCCTATACGGGCTGGGTCATTTATTTGTGAGTATGTTGGTGAGGTTGTTGATGATACTAAAGTTAATTTGGATGGTGAAGATGATTATCTTTTTCGAACTGTCTGTCCTGGCGAGAAGACATTAAAATGGAATTATGGGCCTGAATTGATAGGGGAACACAGCATAAATATTTCAGCTGATACTTTTGAGCCGCTGCCCATCAAGATAAGTGCAATGAAAATGGGAAATGTTGCACGTTTCATGAACCATAGTTGCAACCCTAACACCTTCTGGCAACCAGTTCAATTTGACCATGGAGAGGATGGTTATCCACACATCATGTTCTTCGCACTGAAGCATATTCCTCCCATGACAGAACTGACTTATGACTATGGCGACATCGGATGTGAATCTAGGGGTGTAGGTTCTAGAGCTAAGAACTGCCTTTGTGGATCCTCAAATTGCCGGGGCTTTTTTAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MPRASVGPCICQVSKLSLFFFFEVNCANRDSQLILVKMNRESNFMPTPDQDVLEVKPLRTLAPMFPAPLGADVLNRLTAPPLVFVAPAGQFPGGFGSLNIPAVRSFAAFGGQDASGGKTAGGGDQDASGGKTAAGGDQDAGRGETAAFGGQETVRGEFVANGTPNVGASATGPIDATPISACKSTQPSVISLDDDDNDDDEPYGGNQTSASGRKIKRPSHLKGYNVSDGLGTDSSNGTKKRPKTSNRKAATDNEISLMPPSSDPREVVEVLLMTFEALRRRHLQLDETQETSKRADLKAGAIMLASNLRANIGKRIGAVPGVEVGDIFYFRMELCIIGLHAPSMGGIDYMNKFGDEDDSVAICIVAAGVYENDDDDTDTLVYSGSGGISRNSEEKQDQKLERGNLALERSLSRKNVIRVVRGYKDPACLTGKVYIYDGLYKIHESWKERTKTGINCFKYKLQREPGQPDAVAIWKMCQRWVENPAARGKVLHPDLSSGAENLPVCLINDVNSEKGPGHFNYITQVKYLKPLRSMKPFQGCRCTSVCLPGDTSCDCAQHNGGDLPYSSSGLLVCRKLMVYECGESCRCSINCRNRVAQKGVRIHLEVFRTTNRGWGLRSWDPIRAGSFICEYVGEVVDDTKVNLDGEDDYLFRTVCPGEKTLKWNYGPELIGEHSINISADTFEPLPIKISAMKMGNVARFMNHSCNPNTFWQPVQFDHGEDGYPHIMFFALKHIPPMTELTYDYGDIGCESRGVGSRAKNCLCGSSNCRGFFS</aaseq>

Gene Sequence

<dnaseqindica>1..88#188..2421#ATGCCCCGTGCTAGTGTTGGCCCCTGCATCTGTCAAGTGTCAAAGTTGTCTCTCTTTTTTTTTTTTGAAGTGAATTGTGCGAATAGAGGTTAGAGAAGTCGCATGCAGATGCTAAAGGTTGTTCCTTTTTTTGTTCATTTTGGCAAACAGTGATGTGCCGGGATTAACCTGTGATTTGTTAATGCAGATAGTCAGCTGATACTAGTGAAGATGAACCGGGAATCAAATTTCATGCCTACTCCTGATCAGGATGTTCTGGAAGTCAAGCCCCTGAGGACTTTGGCTCCAATGTTCCCTGCACCATTGGGGGCCGATGTGCTTAACCGGTTGACAGCCCCACCGTTGGTATTTGTCGCACCAGCTGGGCAGTTTCCTGGGGGTTTTGGATCTTTGAACATTCCTGCGGTCAGATCGTTTGCCGCTTTCGGTGGTCAGGATGCTAGTGGAGGCAAGACTGCTGGTGGTGGTGATCAGGATGCTAGTGGAGGCAAGACTGCCGCTGGCGGTGATCAGGATGCTGGTAGAGGCGAGACTGCTGCTTTTGGTGGTCAGGAAACTGTCAGAGGTGAATTTGTTGCAAATGGGACTCCAAATGTAGGTGCTAGTGCAACTGGGCCAATTGACGCCACTCCTATCTCAGCTTGCAAATCAACACAACCAAGTGTGATATCACTGGATGATGATGACAATGATGATGATGAGCCTTACGGTGGTAACCAAACATCAGCATCTGGACGGAAGATCAAGAGGCCATCCCATCTCAAAGGATATAATGTAAGTGATGGTTTGGGCACCGACAGCTCCAACGGAACAAAGAAACGCCCTAAGACCTCTAATAGGAAGGCTGCTACTGACAATGAGATTTCCTTGATGCCTCCATCCAGCGATCCCAGGGAGGTTGTGGAAGTGCTTCTCATGACCTTCGAGGCACTGCGGCGTAGGCATCTTCAATTGGATGAGACACAAGAGACTAGCAAACGTGCAGACCTGAAGGCTGGTGCCATCATGTTGGCCAGTAATCTGAGGGCTAACATTGGGAAGAGGATTGGAGCTGTCCCTGGAGTTGAAGTAGGGGATATTTTCTACTTCAGGATGGAGCTATGCATTATCGGCTTGCATGCACCTAGCATGGGTGGAATTGATTATATGAATAAGTTTGGTGATGAGGATGACTCTGTAGCAATATGTATTGTTGCTGCAGGTGTTTATGAGAATGATGATGATGATACAGATACACTGGTCTACAGTGGTTCTGGAGGTATAAGCAGGAACAGTGAGGAGAAGCAGGACCAGAAGCTTGAGAGGGGTAACCTTGCTCTTGAGAGGAGCCTGTCCAGAAAGAACGTGATCCGGGTTGTACGTGGTTACAAGGATCCAGCTTGCTTGACTGGGAAAGTTTATATCTATGATGGTCTTTATAAGATTCATGAGTCCTGGAAAGAAAGAACAAAGACTGGGATCAATTGTTTCAAGTACAAGTTGCAGCGAGAGCCAGGACAGCCTGATGCAGTTGCAATCTGGAAGATGTGCCAGAGATGGGTAGAAAATCCAGCTGCTAGAGGCAAAGTTTTGCACCCTGATCTATCATCTGGTGCTGAAAATCTCCCAGTGTGTCTTATCAATGATGTTAACAGTGAGAAAGGACCAGGGCACTTCAACTATATTACTCAGGTCAAGTACTTGAAGCCACTCCGCTCTATGAAGCCATTTCAGGGTTGCAGATGCACTAGTGTTTGTCTGCCTGGTGATACCAGTTGTGATTGTGCACAGCATAATGGAGGTGACTTACCGTACAGTTCATCCGGATTGCTTGTATGTCGCAAGCTTATGGTATATGAATGTGGTGAATCTTGCCGATGTTCAATCAACTGTCGTAATAGGGTAGCCCAAAAGGGAGTAAGGATCCACCTTGAGGTCTTCAGGACAACAAATCGAGGCTGGGGTCTTCGTTCATGGGATCCTATACGGGCTGGGTCATTTATTTGTGAGTATGTTGGTGAGGTTGTTGATGATACTAAAGTTAATTTGGATGGTGAAGATGATTATCTTTTTCGAACTGTCTGTCCTGGCGAGAAGACATTAAAATGGAATTATGGGCCTGAATTGATAGGGGAACACAGCATAAATATTTCAGCTGATACTTTTGAGCCGCTGCCCATCAAGATAAGTGCAATGAAAATGGGAAATGTTGCACGTTTCATGAACCATAGTTGCAACCCTAACACCTTCTGGCAACCAGTTCAATTTGACCATGGAGAGGATGGTTATCCACACATCATGTTCTTCGCACTGAAGCATATTCCTCCCATGACAGAACTGACTTATGACTATGGCGACATCGGATGTGAATCTAGGGGTGTAGGTTCTAGAGCTAAGAACTGCCTTTGTGGATCCTCAAATTGCCGGGGCTTTTTTAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004668