BGIOSGA004680

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Revision as of 11:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004680| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004680, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA004680

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004680, complete gene.

LocusTag

OSJNBA0085D07.17

Ensembl Transcript ID

BGIOSGA004680-TA

Ensembl Protein ID

BGIOSGA004680-PA

Length

5546

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38070764..38076309

Sequence Coding Region

38070764..38070859,38071763..38071824,38072526..38072613,38072698..38072759,38072840..38072936
,38073093..38073524,38073636..38074655,38074745..38074876,38074948..38075064
,38075583..38075663,38075922..38076048,38076148..38076193,38076264..38076309

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38070764..38076309 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38070764..38076309 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGCCGGAGGGAGGAGGAGAGGAACGAGAAGATCATCCGTGGGCTCATGAAGCTGCCGCCCAATCGCAAGTGCATCAATTGCAACAGTGTGGGGCCACAATATGTATGTACCAATTTCTGGACCTTCATATGCTTGTCATGCAGTGGAATACACCGGGAGTTTACCCACCGTGTCAAGTCAGTGTCAATGGCTAAATTCACTACTCAAGAAGTGCGGTCTCTTGAACAGGGAGGGAACCAGCGAGCACGTGATATCTACCTAAAAGATTGGGATTGGCAACGAATGAGGTTGCCTGACAATAGCAATCCAGACAGGATAAGGGAATTCATCAGAGCTGTTTATGTAGACAAGAAGTATGCTGGTGGGAAGTCCACGGACAAACCAGTCAATGATAGTGAGAGTGTAAAGAGCAGCGAAAATGATACTAGAAGACCTAGCTCCTACCATTCGTATTCCCAAAGCCCACCTTACGATTTTCAATATGAAGATAGACGATATGGTAAACAAGTGGACACACTTGCACGAAGGCCTTCAGATAGGGCACTCTTTGATGGGAAGCTTGGCAGTTTTTTATACAGTCCAGGTCGTTTGAGAGATCAGATGCATGAAGATCGATTTGCTAATGAGAGTACTGGGTCAAGGTTTTCTGATTTTTCGGCCTCAAGCACTGGTGACATTAGAAATGATGTGCTTTCTCCTAGCTCTCAGGATACAGGGTACAGCAGTCCTTCTATCCACCATTCAAGGAATGTGTCTTCTGAAAATCCTCCATCCCATCGGCATCCGAATGCAACTTCTCAAATTGATTTTAATGGAGTCCGACGATCACAGAGAACAGGTTCTTCAGGAAGTTTTGGATCATTTGATGGTAGCTCAGCATCTAATAAGTCAGTTGATTCAGGTGCCTTACCTGATGCACCTACAGAAAAGCCAGTGAATTCTGCTGTAAATCGTCAGTCTGTTGCGCCCCCCATGGCTCATTCAGCACAATTGTATGCCTCGCAGAGCAATATAAACTCTTCAGTCAGCCAAACTGCTCCCACCAGGGAATCTGTGCAACATGGAAGGGTTCACATGGTCTCTGTAGCAAAGCCGCCGGTTTCAACACAGCCAACGACTTCCACAAATCAGGACTTCTTTGATCAGTCAATGCAACATCCGGTCAATTCTGCAGCACCAATAGATCTTTTTGCTGGCTTTAACCAACAGGCTCCATCAGTTCCCCATAGAGCAGTTGATGTAGGCAGCCATTCTGTTCCTAAAGAAACTCTGCATGACGTTGTGGTTCAGAAAGCCGTGGCATCTTCACCACCTGTTCAAGCCGAAGCACCCTCTACATCTCATCCTGTCCATCATGATCTCTTGAGTCTGTCGCCTTTGCAGGAACCTTCAATTTCCTCTACCCCTCCGTCAATAGATTTATTTGCTGGCTTTGACCAACAACTGCCACCTACAACTAGTGTTCAGCAAAGTCAACCAGCCGAACCATCAATTTCCTCTACCCCTCAGTCAATAGATTTATTTGCTGGCTTTGACCAACAACTGCCACCTACGACTAGTGTTCAGCAAAGTCAACAGGCAGCCCCATTGGTTGCTGACGAAGGATGGGCTTTCTTCCTCGATACACCTCAACACGTATCTCCGACTTCCATTTCAAACGTGCAAGCTCAGGTAGCCACCGCAATAGCTGCATTCCCTCCAAGTGAGAGTCTTGCTAAAGGAACTAATCAGTCAATGTTGCCAACTTCGCCACCAAATGCTTTGATTCCACAAAGTTACCCGCTTATGATGGATCAGTGGAGTTTAAATGCTGAAGAGGTGAAGACCCCTGTCTCCAAAGAAACCTCACAGCCTTGGAATGCCTTTGGTGCATCTACTGGGAACACACCCAACGACTCATTCACATTTAACACTATCTCTCAAGTAGCACCTAATCACTTCAATGTGCCTAGTGTTCCACATGCTGAAGCCAGAGGTCCACAGGATTTGCCTAGCAGTGAACCTGAAAGACTAACCCCTGGGGATATAACCCCTGGTTTCAATGTCTCTCCTGGTGACATGGCTGGGCCATCATTTCGTGGACCACTTCAACAGCAACTGGACATCGTGCCATCTCAGCCTGCAAAATCAACAAATCCATTTGACATGGCATTTGAGTCTGATGTTGAAGCCAGTAACATGTTCATGGATCTGACCTCGCTGCAAGAAATGTTGCCAAATCCCCATGTCAATACAGATTATTCCAACTTGACTGAGTCATGGATACCTCATAATTCTAACATGCCTTATATTTCCTCTGGGCCACAGGGAGGATTATCATACATGGCAACACAAGTACAAGACTCCCTCATGCTGAACTCCGCACAAGGGTCATTTCCGCCCAGAAATCCATTCGAATGA</cdnaseq>

Protein Sequence

<aaseq>MGSRREEERNEKIIRGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHRVKSVSMAKFTTQEVRSLEQGGNQRARDIYLKDWDWQRMRLPDNSNPDRIREFIRAVYVDKKYAGGKSTDKPVNDSESVKSSENDTRRPSSYHSYSQSPPYDFQYEDRRYGKQVDTLARRPSDRALFDGKLGSFLYSPGRLRDQMHEDRFANESTGSRFSDFSASSTGDIRNDVLSPSSQDTGYSSPSIHHSRNVSSENPPSHRHPNATSQIDFNGVRRSQRTGSSGSFGSFDGSSASNKSVDSGALPDAPTEKPVNSAVNRQSVAPPMAHSAQLYASQSNINSSVSQTAPTRESVQHGRVHMVSVAKPPVSTQPTTSTNQDFFDQSMQHPVNSAAPIDLFAGFNQQAPSVPHRAVDVGSHSVPKETLHDVVVQKAVASSPPVQAEAPSTSHPVHHDLLSLSPLQEPSISSTPPSIDLFAGFDQQLPPTTSVQQSQPAEPSISSTPQSIDLFAGFDQQLPPTTSVQQSQQAAPLVADEGWAFFLDTPQHVSPTSISNVQAQVATAIAAFPPSESLAKGTNQSMLPTSPPNALIPQSYPLMMDQWSLNAEEVKTPVSKETSQPWNAFGASTGNTPNDSFTFNTISQVAPNHFNVPSVPHAEARGPQDLPSSEPERLTPGDITPGFNVSPGDMAGPSFRGPLQQQLDIVPSQPAKSTNPFDMAFESDVEASNMFMDLTSLQEMLPNPHVNTDYSNLTESWIPHNSNMPYISSGPQGGLSYMATQVQDSLMLNSAQGSFPPRNPFE</aaseq>

Gene Sequence

<dnaseqindica>1..96#1000..1061#1763..1850#1935..1996#2077..2173#2330..2761#2873..3892#3982..4113#4185..4301#4820..4900#5159..5285#5385..5430#5501..5546#ATGGGGAGCCGGAGGGAGGAGGAGAGGAACGAGAAGATCATCCGTGGGCTCATGAAGCTGCCGCCCAATCGCAAGTGCATCAATTGCAACAGTGTGGTAATAATCTCCTCCGCCTCCTGCTTGCGTTTGTTGCTGAGAAGCTTGATTGGTGGTTCATTTCGTTCCCGGATCGTTGCACGGTAGAGCGTGGAATTGGTCTGCTGGGTTGTAGTGTTCTGCAGTTAGCGCAGATTTATGAAATCCATTTGTCTCTGGTGTGAACTTTTGGTTCGTCCGTATGTTTAAGCTTCAATGTTGGTTGGATGATGATAGGGCGGCTCGTTCGTTTCTGATACAGGGATGACATCTGAGAATAGTGAATCCGTTGCTATTAGCTGTGGTTAGTTTGGTTTTATATGTTATATGATTGGTTAATCAATAGGGAAGGTAGTTCTTGGCTCCTGAGTTTTATTGGCTCGTGAATTTCATTACTTCATGCACAGTTGTTTGTATTTGATATCTAGTCGCTAAGTTGGCTGAAATATGAGCCGCTGAACTTTTAATACTCTACTCCCTCCATCCCACAAAATTTCAAACCCTAGCATTCCAAGATGAAATTAAGGAGGAAGGCAAAATACCAAAATGTCCCTAATTAATAGGAAAGTTGTATTGATGGATGGGTAGGTGAGGGGTATTTAAAGGATAAAATTTCTTGATTTGTGAACTGGTGGTAGGTAAGAAGATAGAAATTGGTTTATTTTGGGACAAAATTCAAACATAGAAGTTGATTTATTTGGGGACGGAGGGAGTACATGTCAGCAAGTGCCTCCGCAACAGTGTGGTAATACTCCCAAGTGCCTCTGAAATTGTTTAACAATTGTTTGTGCCCTATTTTTGCAATGGTTCACAAAATATGACCAGCGGTTCAGCACCATGTTTTCTTTTAGTTGCACTTCTAAGTGAACTCAGATGTCATTGTATTTATTATGTTAACTGAAGCACATAATTGTTTTGTTGCAGGGGCCACAATATGTATGTACCAATTTCTGGACCTTCATATGCTTGTCATGCAGTGGAATACAGTAAGTATTTTGTTCCATTTATCTTGTCGTACATGCCAATTTCTGGTCCTCAGCTGATTTCCTTCTTCGTTCTAGTTTAGAGTTAATGAAGGTCTATTCAGCTTTTGCTCATGCAAGAAAATTTGTGTTCACTTATCTATTGAGCAATGATACTTGCAAGAAGATGTGTGTTGTGGTATCTGATGCTAAGAATGTATGGCATGGGGAAATATAAAGCATTATTTATGGTCCATTTCTTACAAATAGTTCACAATCTAATATCACAGATTCACAGTTGTTTATTCAGCTAATGTCACTCCATATACGGAATTTTCTATTTCATTATTTGCGACTCCGTGGCATGTTTAGCTCAAGGATTTCGATTATCCTAGGATGGGTTGGCCCATCATAATGTTAACCCATTCCATAGTTTTTGTGGGAGGACCCCGTTACTTAGTTTCCATTATTATTGCGGCTATGAGAAAAAAAGGTGGTGATGAATCTGTCTTTCATTCTTGAAACATGTGTTGTTAGGGTTTGACTGGTTTAAAAAATAATTTTCAAAAATAAAGAAAGAAGTGAATGAATTTGGCAGAGAAGTACTTAATCGGATTTGGACCACTGACCCACGTCTTACCACTGCATTAATCTAACATACATTGTTGCTGTACTGTTGGTATTTGATAGGAGTAGTAATCTCTTTTTTTTATGTGTTAAAACAGCCGGGAGTTTACCCACCGTGTCAAGTCAGTGTCAATGGCTAAATTCACTACTCAAGAAGTGCGGTCTCTTGAACAGGGAGGGAACCAGGTAATTCCGGGAATTACTTTGTTTTGTCCTCTTTAGACTTTAGAGTGACCTGGTCATATGCTTACATGGAGGTCATGGGTGCAGCGAGCACGTGATATCTACCTAAAAGATTGGGATTGGCAACGAATGAGGTTGCCTGACAATAGGTGAGTTTGTTTTCATTCCCATGTGCCGTGGAAACTTCTAGTACATTTCTTTATAATTATTCCGCTATGTTTTATTTCAGCAATCCAGACAGGATAAGGGAATTCATCAGAGCTGTTTATGTAGACAAGAAGTATGCTGGTGGGAAGTCCACGGACAAACCAGTCAATGATAGTGAGGTAATGAGTTTATAAATCTCAATGGCTGCTGATATTTGATATCCAAATATTTTATTGTCCTTAAACTATTTATGCTGCAACCTTTTCATTATTTTCAAACTTTTCATTATTTTCCACATTCATTTGCTGACTATAGATTTCAAAATATTTGAATAGAGTGTAAAGAGCAGCGAAAATGATACTAGAAGACCTAGCTCCTACCATTCGTATTCCCAAAGCCCACCTTACGATTTTCAATATGAAGATAGACGATATGGTAAACAAGTGGACACACTTGCACGAAGGCCTTCAGATAGGGCACTCTTTGATGGGAAGCTTGGCAGTTTTTTATACAGTCCAGGTCGTTTGAGAGATCAGATGCATGAAGATCGATTTGCTAATGAGAGTACTGGGTCAAGGTTTTCTGATTTTTCGGCCTCAAGCACTGGTGACATTAGAAATGATGTGCTTTCTCCTAGCTCTCAGGATACAGGGTACAGCAGTCCTTCTATCCACCATTCAAGGAATGTGTCTTCTGAAAATCCTCCATCCCATCGGCATCCGAATGCAACTTCTCAAATTGATTTTAATGGAGTCCGACGATCACAGGTTAATGTTCTCCCCATTCATGTTATATGTTTCCAGCTAATGCTCATTGACTTAAAACCAACTTCTGAGGTAGAGTGGTTTGAAATAAATATACCTTCTTTCTATGTGCAGAGAACAGGTTCTTCAGGAAGTTTTGGATCATTTGATGGTAGCTCAGCATCTAATAAGTCAGTTGATTCAGGTGCCTTACCTGATGCACCTACAGAAAAGCCAGTGAATTCTGCTGTAAATCGTCAGTCTGTTGCGCCCCCCATGGCTCATTCAGCACAATTGTATGCCTCGCAGAGCAATATAAACTCTTCAGTCAGCCAAACTGCTCCCACCAGGGAATCTGTGCAACATGGAAGGGTTCACATGGTCTCTGTAGCAAAGCCGCCGGTTTCAACACAGCCAACGACTTCCACAAATCAGGACTTCTTTGATCAGTCAATGCAACATCCGGTCAATTCTGCAGCACCAATAGATCTTTTTGCTGGCTTTAACCAACAGGCTCCATCAGTTCCCCATAGAGCAGTTGATGTAGGCAGCCATTCTGTTCCTAAAGAAACTCTGCATGACGTTGTGGTTCAGAAAGCCGTGGCATCTTCACCACCTGTTCAAGCCGAAGCACCCTCTACATCTCATCCTGTCCATCATGATCTCTTGAGTCTGTCGCCTTTGCAGGAACCTTCAATTTCCTCTACCCCTCCGTCAATAGATTTATTTGCTGGCTTTGACCAACAACTGCCACCTACAACTAGTGTTCAGCAAAGTCAACCAGCCGAACCATCAATTTCCTCTACCCCTCAGTCAATAGATTTATTTGCTGGCTTTGACCAACAACTGCCACCTACGACTAGTGTTCAGCAAAGTCAACAGGCAGCCCCATTGGTTGCTGACGAAGGATGGGCTTTCTTCCTCGATACACCTCAACACGTATCTCCGACTTCCATTTCAAACGTGCAAGCTCAGGTAGCCACCGCAATAGCTGCATTCCCTCCAAGTGAGAGTCTTGCTAAAGGAACTAATCAGTCAATGTTGCCAACTTCGCCACCAAATGCTTTGATTCCACAAAGTTACCCGCTTATGATGGATCAGTGGAGTTTAAATGCTGAAGAGGTGAAGACCCCTGTCTCCAAAGAAACCTCACAGGTATTTCACCAGTTGGAATATGACCTGTTAGAGATTTGCTCTGCTTGCAAATGTTTACTATGGACTATTTCTCCTTGACTATTTTCCAGCCTTGGAATGCCTTTGGTGCATCTACTGGGAACACACCCAACGACTCATTCACATTTAACACTATCTCTCAAGTAGCACCTAATCACTTCAATGTGCCTAGTGTTCCACATGCTGAAGCCAGAGGTCCACAGGTGAGCATGTTTGATTTAATAACTCTGAGATTATATAAAGGCTAGATTTGTCATATTGAATCATTTTACAGGATTTGCCTAGCAGTGAACCTGAAAGACTAACCCCTGGGGATATAACCCCTGGTTTCAATGTCTCTCCTGGTGACATGGCTGGGCCATCATTTCGTGGACCACTTCAACAGCAACTGGTATGTTTTATCAATGATTCAAGATTCTTTGCTCTGCAAGCTTTCCTGATTTGTTCTACAACAGTTTGATTTTGATTGAGAACAAGCATATACAATTTTTCTGTTACTTCCCAACTTATGACAGATAGTTTTATCCTTTTTATTCCTGGTATCTAGTTTACCATGATATTGTTGGCTCATCGCTGAATGGACAATTTATGAAATTTGGAACCTGTTAGAAAGATGATGCTAGACTGGATGTTTTTTTTATCTGTATGGATTGCTGAGATTATTAATGCACACAGACAGAATGGTCTTGTAATTTTGCATGTAAGCCTTTTAGTTATTTTGCTTGTTAATCTTGTTATAGTCTGTATTCACCTACAGTGAGTACTTTCACTTTTTTCTACAATCTATTGGTTTGGGACTTTGGGCACAAATGATGATGCCTGTCGTGGGGCGCTACCTGGAGCCTTACTATGTCAGTTTTCTAAATGGTTTGTTTTGCTTTTTAACTGTTCTTTTGAATTTTGTTTCAGGACATCGTGCCATCTCAGCCTGCAAAATCAACAAATCCATTTGACATGGCATTTGAGTCTGATGTTGAAGCCAGTAACATGGTGTGTATTAATTATACTATGATGTGGTTTGTGGTCATGATAATTATAATATGGATTCTAGCTTTTTTTTAATGGATATAATCATATTTTAAGACATTTGGAATAAACAACTAGGACCAATTATCTAATACTCTAGAGGCATTTATTTGCGATCTTTGTTTTTAGACATGTTAACAATAGCTTAGTTGGTTCCATGCTGCAAACTTCTATTTTTCTTTTCTTGTTTCTTTATTCACTATTTCTTTCTGTCCTTTTCAGTTCATGGATCTGACCTCGCTGCAAGAAATGTTGCCAAATCCCCATGTCAATACAGATTATTCCAACTTGACTGAGTCATGGATACCTCATAATTCTAACATGCCTTATATTTCCTCTGGGCCACAGGGTATCTGATCCTTTATATCTCCATGATCCTCATGCACAAGAACACAAGCATACTCTACTCTTAATGCTAATACAATATCGGATTCTGTTGTTGTTTCAGGAGGATTATCATACATGGCAACACAAGTACAAGACTCCCTCATGCTGTAAGCTCCTTTCTAACAAGTTATTGTAGTTAGCATTAGGGCTTAGTTTCTAAATGACCTCCTGTAACAGGAACTCCGCACAAGGGTCATTTCCGCCCAGAAATCCATTCGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004680

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA004680&oldid=42404"