BGIOSGA004829

From RiceWiki
Revision as of 11:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004829| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004829, complete gene.| tag = P0683F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004829

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004829, complete gene.

LocusTag

P0683F02.5

Ensembl Transcript ID

BGIOSGA004829-TA

Ensembl Protein ID

BGIOSGA004829-PA

Length

1654

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40507512..40509165

Sequence Coding Region

40507512..40507860,40507916..40508100,40508179..40508532,40508890..40509165

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40507512..40509165 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40507512..40509165 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAACCGCCGCGGCCGTGGTGTGCCGAGGCGGCGGGCTGCGCGCGCCGGCGCGTCGCGGTGGCAGTGACAGCAGCACGACGCGCGCGGGTGGCGTTGCTGCCTCCCCGGCGCCCTCCACCACCGCGCGACGGAGGCCGCTGCTCGTCGCGTCGCTCGGGGAGCCCCTCATCACGGCGCAACCCTTGTCGTCGTCCCTGGGAGATGGCGCCGCGGTACACGAGACGCTGGCTCGCTCCGATTCGGTGATCCCGTCGCTGAAGCCGTCTCACTGCGTTGATCACTCGGTCCAGGTTGACGCCGACGAGGAGACCGGCTCCACCAAGACACTCCCACCTCCTGATGACGCTCATGATATATTCTACCCTCCAGTTCCTACGAAGACAGTGCACGTCAAATTCGTGCTGCAAAAGCGGTGCGCGTTCGGGCAGCGCTTCCTCGTCGTCGGCGACGTCGCGGCGCTCGGTCTCTGGAATCCGGCGAAGGCGGCTGCTCTGGATTGGTCCGAAGACCACGTGTGGACAGTGAAGAAGGAATTGCCAGCAGAAAGATCGATCGAGTTCAAGTTCTTGCTGCAAGATCGATCGGGACATGTCGAATGGCAGCACGGTCGTAACAGAATACTGCATGTAGCTGACACCTCGAACACCTTGATTGTCTGCGAGGACTGGGACGAGGCGAAGAATCAGCAAGTATCAGAAGAGATTGGTGACGCAGATGGGATATTTTCAGGAAGCGATGGCGTCTTCCAGGAAGATGAGCTTCAACTGGGTGAAGAACAAGAGACCAACAAGGGTGTGACTGTAGGTGTGGATGATGCAAAATCGGCTTTAGTCACTTATATTTACAGGGAAATGATGGGAGCAAACGACGCGATCCAGCCACAGTTAGCATTGGACAAACACCACAAGATTCCAGATGAGCTTAGTGGGGAGGCAAACATGGCAGCACAAGATGGCAATCACACTGCTACTGCAGCCGCAGCTTCTGGTTTTGCTGGAAGCAACGGTGAGGATGCCATCTTGCACAAGGAGGGCGATCCAGTAGAGAATAATAGGCTGGGGCTGGCCAGCATTTTCTTCAATGACATGGCCTGGACCAGGAAAGCCCTGCAGCAGTTGCTCCGAAGCCTTGGTTTCCAAATCGGCACGAGAAAAACATGA</cdnaseq>

Protein Sequence

<aaseq>METAAAVVCRGGGLRAPARRGGSDSSTTRAGGVAASPAPSTTARRRPLLVASLGEPLITAQPLSSSLGDGAAVHETLARSDSVIPSLKPSHCVDHSVQVDADEETGSTKTLPPPDDAHDIFYPPVPTKTVHVKFVLQKRCAFGQRFLVVGDVAALGLWNPAKAAALDWSEDHVWTVKKELPAERSIEFKFLLQDRSGHVEWQHGRNRILHVADTSNTLIVCEDWDEAKNQQVSEEIGDADGIFSGSDGVFQEDELQLGEEQETNKGVTVGVDDAKSALVTYIYREMMGANDAIQPQLALDKHHKIPDELSGEANMAAQDGNHTATAAAASGFAGSNGEDAILHKEGDPVENNRLGLASIFFNDMAWTRKALQQLLRSLGFQIGTRKT</aaseq>

Gene Sequence

<dnaseqindica>1..349#405..589#668..1021#1379..1654#ATGGAAACCGCCGCGGCCGTGGTGTGCCGAGGCGGCGGGCTGCGCGCGCCGGCGCGTCGCGGTGGCAGTGACAGCAGCACGACGCGCGCGGGTGGCGTTGCTGCCTCCCCGGCGCCCTCCACCACCGCGCGACGGAGGCCGCTGCTCGTCGCGTCGCTCGGGGAGCCCCTCATCACGGCGCAACCCTTGTCGTCGTCCCTGGGAGATGGCGCCGCGGTACACGAGACGCTGGCTCGCTCCGATTCGGTGATCCCGTCGCTGAAGCCGTCTCACTGCGTTGATCACTCGGTCCAGGTTGACGCCGACGAGGAGACCGGCTCCACCAAGACACTCCCACCTCCTGATGACGGTGAGCTCCACTCAAAAATTACAAAATCACAAGACGATGCGATTCTCTTAAACAGCTCATGATATATTCTACCCTCCAGTTCCTACGAAGACAGTGCACGTCAAATTCGTGCTGCAAAAGCGGTGCGCGTTCGGGCAGCGCTTCCTCGTCGTCGGCGACGTCGCGGCGCTCGGTCTCTGGAATCCGGCGAAGGCGGCTGCTCTGGATTGGTCCGAAGACCACGTGTGGACAGTGAAGAAGGTGAATCCCATCACGCGAATCCTTCCATTCTCCGTGTATAATCTCGTAATGAATCATCCCCACTTCTGATCTGTCCAGGAATTGCCAGCAGAAAGATCGATCGAGTTCAAGTTCTTGCTGCAAGATCGATCGGGACATGTCGAATGGCAGCACGGTCGTAACAGAATACTGCATGTAGCTGACACCTCGAACACCTTGATTGTCTGCGAGGACTGGGACGAGGCGAAGAATCAGCAAGTATCAGAAGAGATTGGTGACGCAGATGGGATATTTTCAGGAAGCGATGGCGTCTTCCAGGAAGATGAGCTTCAACTGGGTGAAGAACAAGAGACCAACAAGGGTGTGACTGTAGGTGTGGATGATGCAAAATCGGCTTTAGTCACTTATATTTACAGGGAAATGATGGGAGCAAACGACGCGATCCAGCCACAGGTAAGTTGCCTGGTGACAGTATTGTTCTGTGTAAAAGGGCAGCAAACATTTATGTGCAACAATATACTACTCCCTTAGTATTTTAATGTATGACGCCGTTGACTTTTTGACAAGTGTTTGACCTTTCGTCTTATTTAAAAAAATTATGTAATTATAATTTATTTTATTGTGATTTGATTTATCATTAAATGTTCTTTAAACATGACATAAGTATTTTTATATTTGTATAAAAATTTTAAATAAGATGAGTGGTCAAACGTTAGTTAAAAAGTCAACGGCATCATACATTAAAATAGAGGGAGTATTTAAGATCAGCTTCTTGTTAATTTAATCGTCCCTTTTTCTTTTCTAAATCAGTTAGCATTGGACAAACACCACAAGATTCCAGATGAGCTTAGTGGGGAGGCAAACATGGCAGCACAAGATGGCAATCACACTGCTACTGCAGCCGCAGCTTCTGGTTTTGCTGGAAGCAACGGTGAGGATGCCATCTTGCACAAGGAGGGCGATCCAGTAGAGAATAATAGGCTGGGGCTGGCCAGCATTTTCTTCAATGACATGGCCTGGACCAGGAAAGCCCTGCAGCAGTTGCTCCGAAGCCTTGGTTTCCAAATCGGCACGAGAAAAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004829