BGIOSGA004987

From RiceWiki
Revision as of 11:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004987| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004987, complete gene.| tag = P0506A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA004987

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004987, complete gene.

LocusTag

P0506A10.22

Ensembl Transcript ID

BGIOSGA004987-TA

Ensembl Protein ID

BGIOSGA004987-PA

Length

4837

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42747861..42752697

Sequence Coding Region

42747861..42748028,42748745..42748861,42749088..42749144,42749478..42749555,42749691..42749735
,42750009..42750068,42750286..42750408,42750989..42751066,42751195..42751264
,42751752..42751859,42752102..42752235,42752317..42752387,42752524..42752572
,42752647..42752697

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42747861..42752697 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42747861..42752697 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGGGGAGGTGGAATGCAGAGTGTGCCACGCGAAGGTGCAGGTGCCGATGGCGGCGGCGGCGGTGTCGAAGGCGTACGACATCCACCGGAGCTCCGTGTCGTCGAGGCAGCGCGCGCTCAACGTCCTCCTCGTCTCCGGCGACTGCGTCCTCGCCGGCCTACAGCCTATATTGGTGTACATGTGTAAAGTGGATGGGAAGTTCAAATTTAGCCCAGTTAGTGTAAACTTCTTGACAGAGATTACAAAAATTATCTTTGCCATCATCATGCTATGCATCCAGGCCAGGCGCCTAAAGGTGGGAGAGAAGCCATTTCTCACAGTTTCAACATTCATGCAGGCTGCTCGCAACAATGTTCTTCTTGCAGTTCCTGCTCTTTTCTATGCTATCAACAATTACATGAAGTTTGTAATGCAGCTATATTTTAATCCTGCAACAGTGAAAATGTTGGGTAATCTCAAGGTTCTGGTGATTGCTGTGCTCCTAAAGGTGATAATGAGGAGGCGTTTCTCCACAATTCAGTGGGAAGCCCTTGCTCTTTTGTTGATTGGTATATCGGTTAATCAGCTCAAATCACTGCCTGAAGGTTCTAGTACACTTGGTCTTCCTGTTGCTGCTGGTGCCTACCTATACACATTATTTTTCGTAACAGTTCCTGCATTGGCTTCAGTTTACAATGAAAAGGCTCTGAAAAGCCAGTTTGATACCAGTATATATCTTCAGAACTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCTTGTGATCACTGCCATCATCCAAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACAATGTTTCTTATTTGCAACAATGCCGCTCAGGGCATACTATCGTCATTTTTCTTCAAATATGCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCATCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTAATTATATCTATGCATCAGTATCTCTCGAACCAAATTAAGGATGAAGTTCCGAGCAGTAAAATTGAGATGGGTGATGCTCATGAGCACAGATCGAAGGAATCTGTAGTCGTCAACGTGTCTGATTCTATTGCTACTGAGGCTAAACACAGGCACGGTACTGATGAGAGGCAGCCACTTCTTCCTGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSGEVECRVCHAKVQVPMAAAAVSKAYDIHRSSVSSRQRALNVLLVSGDCVLAGLQPILVYMCKVDGKFKFSPVSVNFLTEITKIIFAIIMLCIQARRLKVGEKPFLTVSTFMQAARNNVLLAVPALFYAINNYMKFVMQLYFNPATVKMLGNLKVLVIAVLLKVIMRRRFSTIQWEALALLLIGISVNQLKSLPEGSSTLGLPVAAGAYLYTLFFVTVPALASVYNEKALKSQFDTSIYLQNLFLYGYGAIFNFLGLVITAIIQGPSSFNILEGHSKATMFLICNNAAQGILSSFFFKYADTILKKYSSTIATIFTGVASAVLFGHTLTINFVLAISIVIISMHQYLSNQIKDEVPSSKIEMGDAHEHRSKESVVVNVSDSIATEAKHRHGTDERQPLLPV</aaseq>

Gene Sequence

<dnaseqindica>1..168#885..1001#1228..1284#1618..1695#1831..1875#2149..2208#2426..2548#3129..3206#3335..3404#3892..3999#4242..4375#4457..4527#4664..4712#4787..4837#ATGAGCGGGGAGGTGGAATGCAGAGTGTGCCACGCGAAGGTGCAGGTGCCGATGGCGGCGGCGGCGGTGTCGAAGGCGTACGACATCCACCGGAGCTCCGTGTCGTCGAGGCAGCGCGCGCTCAACGTCCTCCTCGTCTCCGGCGACTGCGTCCTCGCCGGCCTACAGGTGGATAATGCTTCACCCCCCCCCCCTTCCTGCACTGGGTTTTGGTGGTCTGATCAGCGTGCCTGGTCCCGAATCGCCGCCAGGTGTAGCGCGCGGACTGAATTGGTTTTGGTGGATTGCGTGAGATAATGAATTGAGAGGATTTAGATTTAGGATTAGTAGCTTGCTGCTCAGTGAAACTGTAATGGTACCAAAGTTTGTGCCTCTGTTGCATTTGTTTAGCTACAGTTCATGCTAAACAAAAACTTACTAATTAGCCATGAGTCTGTGACTACTTTTTCTATGAATGTGTTAATGTTATTAAACTGTGCTGATGTCTGGTAAAATGAGCGTCATGTAAATGTCTAGTGTTATGTATTATCACATCACACCATGATCGGTTTCATTGATCTGTGTACGTGAACAAGCAGTAGTTATTTGGGGTTTTGATGACTTGTATTCTTTCCTGAGCTAATGTTAATGTCTAGATACACATACTAGCTGCTAGGAAAAGAATGAATGTCTAGTTACTACTGTCATTATCATTCCATCATTTTCATTGCTTATTAGATATCTCTAGAGATCTTAAACTTTGGAACATTCTGTTGAAACACAACTTGTTGCTGAGTTATTTAGCCATCTGAGCACATCCATTGAAATGTTTGCTAAGTCATTACTCTGTTGCCACTTTATGAACTCTTATGTTGCCTGACGCATCTCTACCTCTTTTTCTGCAGCCTATATTGGTGTACATGTGTAAAGTGGATGGGAAGTTCAAATTTAGCCCAGTTAGTGTAAACTTCTTGACAGAGATTACAAAAATTATCTTTGCCATCATCATGCTATGCATCCAGGTATGTAAAACCTTCTATTGTTCCATTAAGCGTATTTGTTTATACGGTTGTTTCCTATACTTGTTTATTGGTGACTGCAAGATGCATTTTCTTCATGTACTGCTAAGCAAGTGGAATATTGATTGTTTTTCATGTCTTAGAACTTCATTGCAACCTTGATTACTAAAGAATTCTTTTTCTATTAATTCTTGGATATCCTAGTCAAATCGGTTTCTGCCCTTTGCAGGCCAGGCGCCTAAAGGTGGGAGAGAAGCCATTTCTCACAGTTTCAACATTCATGCAGGTAATATAACCATCAAGTATGCCATGCTTACTGATTGGATCAGGTGATTCCTTGCCTGGTCTAAATCTCAAATATTGATTTCTCTTGCAAACCCCACAGTTGAAGTACTCACTATTTATTTTGAAGAGAGGTAGTCAATCCTCATTGCCTAACAGTATAAACCGCACGCGAATACATTATGGGGCAACTTGTCATTTGGCAGAAAGCATTAAAACTTACATAGAAAGCTATCTTTTAATCATGTGTTACTTCTTACTGGCCATATGCTCCCATTTGTTGCAAGAAGTTAGTGATTTTTTTCTGCCATCATAATTATTCTTCTTCACTTGGCAGGCTGCTCGCAACAATGTTCTTCTTGCAGTTCCTGCTCTTTTCTATGCTATCAACAATTACATGAAGTTTGTAATGCAGGTATAGGATCATAAAGACCTCTTAATTACAGACCGTGTGGGAACTTGACTTTCTTTGAACCAATCTGTGAGATCTTTCTTTTGCCTACCTTCAATCTGATGCAGCTCTTCTAACCATTGATCCTGTCTTGTGCAGCTATATTTTAATCCTGCAACAGTGAAAATGTTGGGTAATCTCAAGGTATGGTATACCCTCTTTTTTTTTTCAAAGATTATCTTACTGTCATAGTAGCTACATAGCATCAACGTTGGTGCATTCACCCACCTCCCACACATGTATGTACGTGCACACGCACACACTTGTCCATGTTGTTTTCAGAAAAGCTATTAAGCTCCTAATAGTCCCAACTCCCAACCTTGTGATTTTTCTAGTTGATTTTCATCATTTCTTTGGAGTTTGGCAACATGTGAATTACGTTTTGATTGTATTGGTCATCACACATTTGTTCTGTAGGTTCTGGTGATTGCTGTGCTCCTAAAGGTGATAATGAGGAGGCGTTTCTCCACAATTCAGGTAGGTTTGGTTTTTAATTATCATTTGTCATGTTAATCAGTTTTGAGCTTTTTTTTCAGGATTTAAAAGTAGAGGTGGTCCAAATGTGGTTTTTTATTTAAGCCGATTGGCTTCCTGTTTTTCTTTACATCTATCTATTAATATCTAACTCTTAATAAATATTTTTGCAACACCACAAACTTTATGTAATTGACATCATACTATGGCGTGTTGACAGTGGGAAGCCCTTGCTCTTTTGTTGATTGGTATATCGGTTAATCAGCTCAAATCACTGCCTGAAGGTTCTAGTACACTTGGTCTTCCTGTTGCTGCTGGTGCCTACCTATACACATTATTTTTCGTAAGTTCTGTCTATTGGTTCATTTGTTCATTCGTTTTTCTTGTACCTCCTTTCATCCTCTTATATCTGATTAGTGCATGGTGTGCTACTCTATTTAACATGTAGGTTTAGACTAGACTAATGTATCTTCTGTGTAATTTGGGAAGGTAGGTTAACTTTTAGTTTTCAGAGTTCATTTTCATGCCCAGCTCAAGCAAGGCTTTCTGGTAGTCCGTAGATTACGATACAATGATGCTATATCTGGCCTGCTCTTTATCTGCATATAGTTATAGACGAGCAGACATTTGGGTTATTGATACAATGCTTGAACTCTTATATGTTGTGCTTTGAACCAATGTTTTGCATTTTATTGATTCACATATAGTTAAAAATATGTAGCATGGTAGGATTAAGAACTTGTGGTAAACTGACAGAGTAAAATAGCTACAGTAGTTCTCAGCACATGGGATTACATTATTGCTTTTGAATACTTCACATTGGAAAAACAAGCTTAATTTCATTTGATTGCTCATTTTTTTTCCTATATAACAGAAATAGCCAACACAATCTAATGTTCCATGCTAACATTTTCTGCAATCAGGTAACAGTTCCTGCATTGGCTTCAGTTTACAATGAAAAGGCTCTGAAAAGCCAGTTTGATACCAGTATATATCTTCAGGTATGACCATATGCATACTTATCCTGCAGTCACCATGTGCTACTCAATGATAATGTACTAAACTATCAGCCTGTATCTCCTAAAGCTATTGTTTTTCAAGGGTTATGACTGTCATATCATGTTTACAGAACTTATTTCTGTATGGATATGGTGCAATATTTAATTTCCTAGGGCTTGTGATCACTGCCATCATCCAAGGTAATTGTTGAGAATTTATATCTCATGATAAGAAATGCATTTTTTTTTGCATATTATAGTTTCCAAATTATGTGTTGTGATCTGCTGTCAATAACTTTACTTTTAATTACTAGCCCTATGCCTGCTTGGATTTTGATAGGGTACTTATTTGGTTAATTCAGTCGTTTTGTGATATATATCTTTAGTTCTTTACACCTCGGTATGGCTACAATTTAATAGATCATAATAAAGTGCTTCAATAGTTTAATTAATGGAATCTCTTTCTTCTTGCTTTCCATTTTGTCACAATTATTCAATCAACTATGCTTTTAGGATGACAATATGCGCAACGAAATCTTGTACCTTAACTGTGTTTTCTTTGAAATGTCCTCTTGTACATATGTATCAACCATTTGACTTCTACGATGCCACTATAGCTATGTACTTTTCTTTTGTGTCATGCATTACTCGGTGCTATAAAGATCACTTATTATGTAATTTCGTCCAGGTCCTAGTAGCTTTAATATTCTGGAAGGGCATTCAAAGGCCACAATGTTTCTTATTTGCAACAATGCCGCTCAGGGCATACTATCGTCATTTTTCTTCAAATATGCAGGTACGTTTTCCCTTTGACTCTTAAAATGGTACTTTTTAATATCCTTGAAGTCTGTTTTTGTACATGTTCTGGATGCAGTTGACCAGTTTTTTTTGGTAAAGTTAGTATGCAAAGCTGTGATTATGTTTTAAGATCTCACCTACATGGATAAGCTAATTCTGCTTTTATGAGTTTTTGTTTTAATATGCCAGTTTTGGTAATTGTACTGCAGTTCATTTAAAACACATTAATGCTGACTGCAGATACAATATTGAAGAAGTACTCATCAACAATCGCCACAATCTTTACTGGAGTAGCATCTGCTGTGTTGTTTGGTCATACTCTGACCATAAATTTTGTTCTTGCAATATCAATAGTAATTATATCTATGCATCAGGTAACCTTTCTTTTTTCCTGTCTAGTCAATTAGTACTGACTCTTTCAGTGATTTTACATGTTTCTGGTGTTTTTGTTTCAGTATCTCTCGAACCAAATTAAGGATGAAGTTCCGAGCAGTAAAATTGAGATGGGTGATGCTCATGAGCACAGGTTTGGATTCTTAACACTATAGAACATTGTAGTTTGTCACTTTTCCATGCCGTGGTCTATCATCAGTAGAAATCCATTTGCTATTTCCATGATTGTCTAGTAATATATTTGGTTTGATGGATGCCTTGTTCCTCAGATCGAAGGAATCTGTAGTCGTCAACGTGTCTGATTCTATTGCTACTGAGGTAACTATTCACATCAAATTCAAAACTGCCCCTGTTTTTCTTTGGATACAAATCATTGGATCTATACAATGCAGGCTAAACACAGGCACGGTACTGATGAGAGGCAGCCACTTCTTCCTGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004987