BGIOSGA004998

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Revision as of 11:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA004998| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA004998, complete gene.| tag = B1065G1...")
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Gene Name

BGIOSGA004998

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA004998, complete gene.

LocusTag

B1065G12.21

Ensembl Transcript ID

BGIOSGA004998-TA

Ensembl Protein ID

BGIOSGA004998-PA

Length

2960

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42984434..42987393

Sequence Coding Region

42984434..42984631,42984727..42985244,42986619..42987393

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42984434..42987393 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42984434..42987393 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTACTTCGGCGTGTCGACGAACCTGGTGAACTACCTCAAGTACAGGCTGCACGAGGGCAGCAAGTCGGCGGCGAACAACGTCACCAACTGGGAGGGCACCGGCTCCATTGCGCCGCTCGTCGCCGGCTACCTCGCCGACGCCTTCCTCGGCCGATACTGGACCATCGTGCTCTCCATGGTCATCTCCGCCGTGGGCTATGGCGTGCTGGCGGCGAGCGCGTCGGTGATCAGGCTGGAGACCACGGCGCTGTACGCCGGGATGTACCTGGTGGCGCTCGGCGGCGTGCTGGAGCCGATCATGGCGCCGTTCGGCGCCGACCAGTTCGACGACGGCGAGGACGATCAGCGCGGCCGGCGGCAGAGCTCCTTCTTCAACTGGTTCTACCTCTCGCTCAACTGCGGCTCGCTCGTCGGCGGCACCGTGCTGGTGTGGGTGCAGACCAGCGTCGGGTGGGGGGTCGGGTACGGCGTCCCGGCGATCTTCAGCGCGCTGTCCGTCGCCGTGTTCCTCGCCGGCACCGCCACGTACCGGCGGGACCAGCCGCCGGGGGGCAGCCCGCTGACGAGGATCGCGCAGGTGGTGGTCGCCGCGGTCAGGAAGTTCGACGTGGAGATACCGTCGGACTCGTCCATGCTGTACGAGAGCGACGCCGTCGATGGCATGCCGGCGATACATGGCCGCCGCCGACTCCTCCACACCGGTCAGTTTAGGTTCTTGGACAGAGCTACGGTGAAGACTGCCGGCGAGAAGGCGGCGCAGAGCCCGTGGCGACTGTGCACGGTGACACAGGTGGAAGAGCTCAAGTGCGTGCTCCGGCTGCTGCCGGTGTGGGCGACCGGCATCATCTACGCGGCGGCGTACACCCAGGTGACCACCACCTTCATCCTCCAGGGCGACACGCTGGACCGCAGCCTCGGCCGCTTCAAGGTCCCCGCCGCCGCGCTCTCCATCTTCCACACCCTCAGCGTCATTCTCTGGGTGGCGCTCTACGACCGCGCCATCGTGCCGCTGGCGCGCCGCGTGACGCGCCACGACGGCGGGTTCACGCAGCTGGCGCGGATGGGCGTCGGCCTCGTCATCCTCACCGTCGCCATGGCCGCCGCCGGCGCGCTCGAGGCGGCGCGCCGCCGGCTGATCGCGCGGCCGTCGGTGTTCTGGCAGGTGCCGCAGTACGCGGTGGTGGGCGCGTCGGAGGTGTTCACGCTGATCGGGCAGATGGAGTTCTTCTACGACCAGGCCCCCGACGCCATGCGCAGCCTCTGCTCGGCGCTCTCCAGCACGTCGTTCGCGCTCGGCGACTACGCCAGCTCGGCGCTCGTCGTCGTGGCGGCGCGCAGGGGCGGCGCGCCCGGGTGGATCCCCGACGACATCAACCGCGGCCACCTCGACTACTTCTTCTGGCTGCTCACCGCGCTCTGCGTCGCCAACTTCGCCGCCTACCTCCTCATCGCACGCTGGTACACGTATAAGAAGACCGTAGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAYFGVSTNLVNYLKYRLHEGSKSAANNVTNWEGTGSIAPLVAGYLADAFLGRYWTIVLSMVISAVGYGVLAASASVIRLETTALYAGMYLVALGGVLEPIMAPFGADQFDDGEDDQRGRRQSSFFNWFYLSLNCGSLVGGTVLVWVQTSVGWGVGYGVPAIFSALSVAVFLAGTATYRRDQPPGGSPLTRIAQVVVAAVRKFDVEIPSDSSMLYESDAVDGMPAIHGRRRLLHTGQFRFLDRATVKTAGEKAAQSPWRLCTVTQVEELKCVLRLLPVWATGIIYAAAYTQVTTTFILQGDTLDRSLGRFKVPAAALSIFHTLSVILWVALYDRAIVPLARRVTRHDGGFTQLARMGVGLVILTVAMAAAGALEAARRRLIARPSVFWQVPQYAVVGASEVFTLIGQMEFFYDQAPDAMRSLCSALSSTSFALGDYASSALVVVAARRGGAPGWIPDDINRGHLDYFFWLLTALCVANFAAYLLIARWYTYKKTVD</aaseq>

Gene Sequence

<dnaseqindica>1..198#294..811#2186..2960#ATGGCCTACTTCGGCGTGTCGACGAACCTGGTGAACTACCTCAAGTACAGGCTGCACGAGGGCAGCAAGTCGGCGGCGAACAACGTCACCAACTGGGAGGGCACCGGCTCCATTGCGCCGCTCGTCGCCGGCTACCTCGCCGACGCCTTCCTCGGCCGATACTGGACCATCGTGCTCTCCATGGTCATCTCCGCCGTGGTACGTTCGTCGCCGCCGCCGGCGTACGTCGTGGATGTGTGCAGAGAGCTCTAGCTCACGCTTTATACATCGCGTGTTCTTTTTCGAGCATGCAGGGCTATGGCGTGCTGGCGGCGAGCGCGTCGGTGATCAGGCTGGAGACCACGGCGCTGTACGCCGGGATGTACCTGGTGGCGCTCGGCGGCGTGCTGGAGCCGATCATGGCGCCGTTCGGCGCCGACCAGTTCGACGACGGCGAGGACGATCAGCGCGGCCGGCGGCAGAGCTCCTTCTTCAACTGGTTCTACCTCTCGCTCAACTGCGGCTCGCTCGTCGGCGGCACCGTGCTGGTGTGGGTGCAGACCAGCGTCGGGTGGGGGGTCGGGTACGGCGTCCCGGCGATCTTCAGCGCGCTGTCCGTCGCCGTGTTCCTCGCCGGCACCGCCACGTACCGGCGGGACCAGCCGCCGGGGGGCAGCCCGCTGACGAGGATCGCGCAGGTGGTGGTCGCCGCGGTCAGGAAGTTCGACGTGGAGATACCGTCGGACTCGTCCATGCTGTACGAGAGCGACGCCGTCGATGGCATGCCGGCGATACATGGCCGCCGCCGACTCCTCCACACCGGTCAGTTTAGGTGAGCAAGCGTATGCATTTCCAGTTAGTGCAATTGCCTTTGTCGTTTCTCTTTGAATTGGAGGAAAAAATGATTTGAGATTGCTAAAAATCATGTGGATTGATTAACCCCAAATATTAGTACCATCAAATTCTTGTGTTAATAGTACTAATCGTCCAGTCTAGTCTATAAGGAGATGGATTTTCCGCCTCAGGCCTTTTCCTTTTAATCCCACCCACAAGAGAATTTGAAGAAGAATAATTTCATACCTATTATGATGTGGAATTAATTCCTCTCAATCTTATTCTTGTAGGGATCGAACGAACAAGGTCTCAAGCGGGCATCCTCTCCTTTCTCGTATGTCACTCAAATGTTTCTTTAAAATGAATATGATAATATAAATTAATATGTGAAATATCACTCCATAAACACATAATATGCCATATTTCTTTTTCTTTTTAGAAACATAGTACAAACGTATGCGCTCACAACGCACGCATACTCACCCCTATAAATGCATACATGCACATCCTATTTCTAGCTATGAGCATCTTCAAAAGACTGAGTCAACATATTTTGATACTAACGAATTCACTGCGAATGTCTTGGTATCAAGGGGTACATCATGTACCACTGAAAAAAATAATTAGCCGCAAATGCGAGCACTCACGCCAAGTCTAAACTTGAATCTGGATGAGCGGATTGCACCACAAAGAAACCAACAAGTTAAGTTACACTCACTCCGCATCAAATTTATTTGTAACTTAAGGTAATTCAACTTCGACAAAAGTATAATAAATGCAAGTTTTTTAAAAGTCTTTCTTTATGTACAAGCCATCGCATTAATACTAAGAGATATAAAAACCATGATTGCCACAAAAATAAACAAAGAAAGTTCAAAGTTTGAGATGTTACTAATAAATATTCTTTTAGTGGAACATTTGCAAGTAAACGTCAAATATTTATTATCAAAGGGAGGTAAACAAAAAAGTTTACTTTAGTGGAACATATATTAGCTCTATGCACTGCACATAAAAATTCAGCTAGTTTAGAATAATATATATCAACTTTTAATTGCCGACCCTTTCTTTGAGATGACATGTCATATTGTCATGGCGCAACTAAGGCTTTGTTTGGAGAGCTTCTAACTGCTGCAACTTTTTCTAGAATTAAAAACTCCCTTAAAAAGTTTAGCGTTGGTCATAATTTTGAAAAGTTGTAGTTGTAAAATCTAGAAAATAAACTAGAAGTCAAAAGCTGGAAAACCGAGCTTTTCTAAATTCTTAGAAACTGGTTACCGACTAACTATTTTTTAGAATTTTAAGCTCACTAATCAGGCCCTAAATCACCTATTCAAATCGTTTGCCTCATGAACTCGGCTGCTTGTTGATCTAGGTTCTTGGACAGAGCTACGGTGAAGACTGCCGGCGAGAAGGCGGCGCAGAGCCCGTGGCGACTGTGCACGGTGACACAGGTGGAAGAGCTCAAGTGCGTGCTCCGGCTGCTGCCGGTGTGGGCGACCGGCATCATCTACGCGGCGGCGTACACCCAGGTGACCACCACCTTCATCCTCCAGGGCGACACGCTGGACCGCAGCCTCGGCCGCTTCAAGGTCCCCGCCGCCGCGCTCTCCATCTTCCACACCCTCAGCGTCATTCTCTGGGTGGCGCTCTACGACCGCGCCATCGTGCCGCTGGCGCGCCGCGTGACGCGCCACGACGGCGGGTTCACGCAGCTGGCGCGGATGGGCGTCGGCCTCGTCATCCTCACCGTCGCCATGGCCGCCGCCGGCGCGCTCGAGGCGGCGCGCCGCCGGCTGATCGCGCGGCCGTCGGTGTTCTGGCAGGTGCCGCAGTACGCGGTGGTGGGCGCGTCGGAGGTGTTCACGCTGATCGGGCAGATGGAGTTCTTCTACGACCAGGCCCCCGACGCCATGCGCAGCCTCTGCTCGGCGCTCTCCAGCACGTCGTTCGCGCTCGGCGACTACGCCAGCTCGGCGCTCGTCGTCGTGGCGGCGCGCAGGGGCGGCGCGCCCGGGTGGATCCCCGACGACATCAACCGCGGCCACCTCGACTACTTCTTCTGGCTGCTCACCGCGCTCTGCGTCGCCAACTTCGCCGCCTACCTCCTCATCGCACGCTGGTACACGTATAAGAAGACCGTAGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA004998