BGIOSGA005162

From RiceWiki
Revision as of 11:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005162| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005162, complete gene.| tag = P0466H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005162

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005162, complete gene.

LocusTag

P0466H10.36

Ensembl Transcript ID

BGIOSGA005162-TA

Ensembl Protein ID

BGIOSGA005162-PA

Length

2177

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45752315..45754491

Sequence Coding Region

45752315..45752561,45753194..45753458,45754242..45754491

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45752315..45754491 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45752315..45754491 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCGCGCAGGGCACCGGCGACTTCTCCGTGGTGGTGCTGGGCTCCGACTTCGCGGTCGACGCCGGCGCCGCGCTCCTCAACCCGGCCGACCGGGAGGAGTGGCACGACTGCCTCCCCGACCTCTCCGCGCCCGCCGACGGCGAGGACTTCTCCGACCTCGAAGAGCTCCAGGTCGTCCGCGTCCAGGGCACCGACAGGGCCGGGAGGCGCATCGTCCGCGTCGTCGGCAGGTTCTTCCCTGCTCCTGTCATAGGTGGTGATCGTCTGAAGAAGTATGTTCTTCACAAGCTGCGCACCGAATTGCCAGAGGGGCCATTCTGCCTTTTGTACATGCACAGCACTGTGCAGTCAGATGATAACAACCCTGGTATGTCAATCTTGAGGGGGGTCTATGAAGATCTTCCACCTGAATACAAGGAGAGACTGCAGATCTTATACTTCTTGCATCCTGGGCTTCGCTCTAGGTTGGCCATCGCCACGCTTGGCAGGCTCTTTTTAAGTGGAGGTTTGTATTGGAAAATCAAGTATGTTAGTCGGCTGGAGTATCTTTGGGGGGACATCAGAAAGGGGGAAGTTGAAATTCCAGATTTCGTGATTGATCATGATAAGATTCTTGAGCACCGACCACTGACAGACTATGGCATAGAACCAGATCCTCTGCATCTTGCTGATATGCCTGCTGTGGGGTACTCGCTCGGAAGGTATGAAGACAAATGGTCTCCTGAAGATCGATGGTATTCTCGCAATTACATGTGA</cdnaseq>

Protein Sequence

<aaseq>MALAQGTGDFSVVVLGSDFAVDAGAALLNPADREEWHDCLPDLSAPADGEDFSDLEELQVVRVQGTDRAGRRIVRVVGRFFPAPVIGGDRLKKYVLHKLRTELPEGPFCLLYMHSTVQSDDNNPGMSILRGVYEDLPPEYKERLQILYFLHPGLRSRLAIATLGRLFLSGGLYWKIKYVSRLEYLWGDIRKGEVEIPDFVIDHDKILEHRPLTDYGIEPDPLHLADMPAVGYSLGRYEDKWSPEDRWYSRNYM</aaseq>

Gene Sequence

<dnaseqindica>1..247#880..1144#1928..2177#ATGGCGCTCGCGCAGGGCACCGGCGACTTCTCCGTGGTGGTGCTGGGCTCCGACTTCGCGGTCGACGCCGGCGCCGCGCTCCTCAACCCGGCCGACCGGGAGGAGTGGCACGACTGCCTCCCCGACCTCTCCGCGCCCGCCGACGGCGAGGACTTCTCCGACCTCGAAGAGCTCCAGGTCGTCCGCGTCCAGGGCACCGACAGGGCCGGGAGGCGCATCGTCCGCGTCGTCGGCAGGTTCTTCCCTGGTGCGCCAAACGCCCTCTTCTCCCCACCTCTCCTTTCCTTTGTGGCTTTATCAGATTGGATCGTGGTTCCCTTCTGGATGTATCTATCATCTATGTGGGTGCGAATTATGTGAATTAAACAGGAAAAAAATTGGATCCTGGAGATTGATAGTTCATAGACCTTCTCAATTGTGTAGTAAATTTAGATTCTGATCCGCCTGCACTGTTCGGTAGATGCACCGAATTGAGTGTTTTGGACACGTTGAACTTGGGAGAGGTACACAGATTTGTTGAATGCTGGACCTTGAATTAATATATCAGAGCTTGTTTGCTAGCACTCGATCAATGGATGGTTTGATTGATCTTAACGAAATGTCAGATAATTCATTTGATAATTGCCTAGTTGGTACAACGTTTATCTCCGTTTTGCTGCCCTTCATTAGTGCCTGGCGCCCTGGCGGTGTATTGGAGCGGTTGCTGGTCATTTTTTATACCGATATTGGAAATAGCAAGCAGCTGTATGTTCATTTCTTGAATATAGTGTGCGGCTGCGACTGTCATGAAGTAAACCTGATGCTGTAATGCTCTTGTGTTAGGCCCTTACTCTTTTCTCATTGTCAACACTAACATAACATCTGCTTTTCGAATTCCAGCTCCTGTCATAGGTGGTGATCGTCTGAAGAAGTATGTTCTTCACAAGCTGCGCACCGAATTGCCAGAGGGGCCATTCTGCCTTTTGTACATGCACAGCACTGTGCAGTCAGATGATAACAACCCTGGTATGTCAATCTTGAGGGGGGTCTATGAAGATCTTCCACCTGAATACAAGGAGAGACTGCAGATCTTATACTTCTTGCATCCTGGGCTTCGCTCTAGGTTGGCCATCGCCACGCTTGGCAGGCTCTTTTTAAGTGGAGGGTCAGTATTGTCTCTAATATTTTCTGTTTTGCTGTTTCCCTATCTTATTCAGCAGAAAAATTAATGATTAAACTCCACCATATTGTTGCACCTCATAGACTAGATATTGTAGTGGTAAGTAGACCTGTTTTAAATCGATAGGCAGGCTAGTAAATCAGCGTGCTTTCTTTTATCTGCAGTCTCTGGTACTGACATTTTGGTATTGATATTAGTTGAAACCTAAAATATGCCGCTAGCAATGGACACCAGAAGTTTTTTTTTCTGACAGCAAGGATTTTAGCTCTACCAGAACCTGCCTTACTGCAATTTGATGCACAAGTAATCTCATAACCATGCAAAACCTACTCAAAGTCTCAAATGTTACCCATACATTACTCTAGCAAATATCTTGAGAACATTTGTGAAATAGATCACTGACTTTTCCTCCTAAAGCATTTACATCTGCAGAACATCAGAAAACACCTGAAGTGGCAGCTGTGCACTAGTTCTCCCAATTTTGCCTCTAGAAATATGCTTCCTTCAGAAAATGATAAGCTGAAAGCTGCATACATATGGAAAACCAGATCTTGTACAAAGATGAGAAAACAGGACAAGATGCAACATACCAATCTGTGGCATATTATAATACCTCATAGGTTCGGTAGTGATTGTAGTGATAAGTAAACCTGTTTTAAATCGATAGGCAGGCTAAATCAGTGTCCTTTCTTTTATCTGCTGTCTCCAGTACTGACTTTCAGTATTAATATTAGTTGAAATCTAAAATTCCACAAGCTTTTCTTGCAGTTTGTATTGGAAAATCAAGTATGTTAGTCGGCTGGAGTATCTTTGGGGGGACATCAGAAAGGGGGAAGTTGAAATTCCAGATTTCGTGATTGATCATGATAAGATTCTTGAGCACCGACCACTGACAGACTATGGCATAGAACCAGATCCTCTGCATCTTGCTGATATGCCTGCTGTGGGGTACTCGCTCGGAAGGTATGAAGACAAATGGTCTCCTGAAGATCGATGGTATTCTCGCAATTACATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005162