BGIOSGA005200

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Revision as of 11:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005200| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005200, complete gene.| tag = OsI_052...")
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Gene Name

BGIOSGA005200

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005200, complete gene.

LocusTag

OsI_05261

Ensembl Transcript ID

BGIOSGA005200-TA

Ensembl Protein ID

BGIOSGA005200-PA

Length

5903

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46202715..46208617

Sequence Coding Region

46202715..46202721,46203578..46203683,46204067..46204134,46204747..46204791,46205501..46205597
,46205898..46206207,46206404..46206487,46206674..46206745,46207441..46207482
,46207592..46207681,46207767..46207874,46207953..46208045,46208201..46208280
,46208362..46208617

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46202715..46208617 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46202715..46208617 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGGTATAAGCTGCAATGATTGTTGCAAGCATGATCCAAGTGCTTCTTCAATCCGAGAGTCTAGAGACATTACACGTGCTGCACAGGTTGACTCTTTTGCTGATAGGTGTAAGCTCCTTGATATTCTGATAACAAACAAGGCAGCTGCAAAGGCTATATTCATCAAAATGGACCCAGATCAAGTGGAGATTCCCTTTAAAGTGCTTCAGGAGAGAGTCCCTGAAAGAGCTGCTGAAATAAGCTCAAAGCTTGCTCAATGTGATAGATATTTCTGCGGACATGTTGAATCTTTGACTGCTCTATTGAAAACCCTGGATAAGACTGCATTGCCGGCAATTAAAGAAATTGTTCTTGGGCATCCTCTTTTTTGGGATTTGATGACGAGGGTAAACTTCTTTGCAAAGGATATATCACTTAGGTTGAATGATGACACTTTTATGTCAAGAGTGAGAGCTTCAAAAATCCGTAAGCTTCCTTGGAATGAAGGAACAACTCAAGACTTTAAAGGTCTCCTGTTTGAAATGGAAACCTATCGTAAAGATGAAGGAATTCCAGCATATGACTTCAGAAGCTTAAAAGATTATGTACGCTGTGTCTGTGGTGCTTATGCTCACTGGAATAAAATAAAGCTAAATGTTGACGACATTGTTCGGCAAAACCATCCTACCATATGCAGTGATATCTGGCATCTTCTTGGAAGTTCAGACATGTCGCATGCTGATTCTAAGAAGCCAGTTGAAGAGATTAAATTAATATCTGATGTCGTTAGAGATTCACCACACAAGATTTTCATCGCTGGAATTCCTAGAGTGATTTCATCTAAGATGCTCAGGGATATAGTTAGTTCATTTGGTCAATTGGCTGCTTACCGCTTTCTTTTTAATGAAGACCTTGGTGGAGCATGCGCATTTCTTGAGTACATTGATCACTCCATTACATCAAAGGCATGTGCTGGCCTTAACGGCATGAAGCTTGGTGGATGCGTAATAACTGCTGTTGGCGTGTTAACTGATCATCCTGGGCAGGCTGGCAATGAAGCTTGCCCATTTCATGGAATTCCTGCCAATCCCAAACCTCTTCTTGCAGTACCAACACAAGTCCTGCAGCTAAAAAATGTGTTTGACCAGGAGGAATACTCGCTGCTTTCAAAATATGAGGTAGATGCAGTATTGGAAGATGTACGTGTGAAGTGTGCAAGGTATGGAGCTGTGAAATCCATAAATGTCGTAGAGTATCCTGCTGGCAGTGACAACACCAAGGCACCTGCAGTAGATGCTAGAGACAACGCTTTGGCTTCTAACAACACTGCACTCGAAGCTGGCTGTATACTTGTAGAGTTCTTGTGCAAGGAGGCTTCATTCATGGCTGCTCATTCACTCCATGGCCGGCCTTTTGGCAGCAGGATTGTCTCTGCGGGATATGCTCCATATGATCTCTTATCTCTACCTACATAA</cdnaseq>

Protein Sequence

<aaseq>MGGISCNDCCKHDPSASSIRESRDITRAAQVDSFADRCKLLDILITNKAAAKAIFIKMDPDQVEIPFKVLQERVPERAAEISSKLAQCDRYFCGHVESLTALLKTLDKTALPAIKEIVLGHPLFWDLMTRVNFFAKDISLRLNDDTFMSRVRASKIRKLPWNEGTTQDFKGLLFEMETYRKDEGIPAYDFRSLKDYVRCVCGAYAHWNKIKLNVDDIVRQNHPTICSDIWHLLGSSDMSHADSKKPVEEIKLISDVVRDSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFNEDLGGACAFLEYIDHSITSKACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPANPKPLLAVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEYPAGSDNTKAPAVDARDNALASNNTALEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGYAPYDLLSLPT</aaseq>

Gene Sequence

<dnaseqindica>1..7#864..969#1353..1420#2033..2077#2787..2883#3184..3493#3690..3773#3960..4031#4727..4768#4878..4967#5053..5160#5239..5331#5487..5566#5648..5903#ATGGGGGGTACTGTGGCAGAACATCGCATATCCCTTATTCAGATGATAGTTTCAGTGGCTTTGCATTCTTCTGTCAAATAGACTTGTTCAATTTTTAACATGCCTATTAAATCTGCAGAATACAGCTGTGGCACTGAATATATGGACTTCTCTGTAGTGTTGAACTAATTTCACATGGTTTTAACATGCCTATTAAATCTGCTATATATGTTTCTATCATTTTGCCAGAATTTTTTTTGTCGAAATATAGCTGCACTGTTCTGTCTTCATCACCAGAGAAATGGAGGGGCGGATTGGTCAACTGCCTTGTCCATGCTGGCCATCCTAGGTGGCACTCCACAGTGGCAAAATATTAGTGCATAATATCTCACCAGTGGCAAAAATTACAAGGACAAACCTAAGAGTGGCATTTAGAGAGTTGCCACTTCTAATAGTGACAAATATTCAGCCCCCCCCCCCCCCCCCCCGGCCCCACGCATTCTTCATCTGTTATGAAGTGGTATTAATTCATTAGTTTGTACTACTAGTAAGATATTTAGAGTTGTATATTACATGCTGTTAATCTCACAGAATGTGCTGTAGGCTTCTGCTCAAAGTTTCACTTTGCATTGTCGTCTTCTTCTCAGGCCTCCATTTCCTCTTGTTTGCTCGTTCTTTCCTGGATGTATTGGGTATTCCTTTTTCTGTGACTTCCAGAATTCTGGTCCTGTGGGCTCAACCATGCCGTGCTGTCTTGGGCTATGCGCTCGTGGCAGCCTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCACTGGAGCCATATCTCCATATCGACAGCACGGTTTGCAGCCTTGCAGGTATAAGCTGCAATGATTGTTGCAAGCATGATCCAAGTGCTTCTTCAATCCGAGAGTCTAGAGACATTACACGTGCTGCACAGGTTGACTCTTTTGCTGATAGGTGGTACGCTTGAAGTACCCTGGAAACCTGTAGTTAACAGGAAGAATGGAACATTAGGTAAAACATACAACAACTTGTTAATAGATACTCCAGATGATACTTCATAATTGCAACAATTCATAGGATAGCTTGTTTGAATATGAAACAACTTGTCAATTGAACCCTTTTGCGCTATAAGATGCAAGACATTATTACTGGTTTGTAGCTGTTATGTAACAAGGACGGGATTCTTGGCTTGTCGAATTATTGTGACAATGCAAGCGAGGAAAGAAAAAAGTATCATTTATCTCCTTTTGTTAAGATGTGCTATTATTTACCCATTGTATATATGTCAGCAAACACAACTTCTTGCATACTAAAATTTGTTTATTGTACATTGTTGGCAGTAAGCTCCTTGATATTCTGATAACAAACAAGGCAGCTGCAAAGGCTATATTCATCAAAATGGACCCAGGTATGTAAATTTCCATTCAACAGTTCTCTATATTCTCAATATCAATACTAGTTTCATGGCTCATGAGCATATGGCTGTACAATGGCTGGCCGGCAGCACATGGCAACTTCTGTATGGGCCCATGGTGCTGATCAAAAGCACACTACACATGATATTGATACCTATAGCCTAGTTATATAGTTGGAAGATCGAGATCGATTAATGATTTTGCTGTTAGGTTTGAGATCTTTGAGTTATTTGGTTCTTAGGGGCTGGCCATACAGAAATATGAGGAGCATTCAGCAGTTTATGTGGGGCAAGCAAGATGTATGAATTAATCTATTCTCTCATATAAAGGTCTTCATCTCCTCAGTGGTTTTCTAAGTAGTATAGTATCTCATCTTCTTCGAAGCCATAGCAAGCTAAAATGTATTTAAGTTGTGCCGATTGTTTAACAGTATTATATGGATATCTGGCAAGTAGGGCAAGTAGGATCTGAAAGTGAAATAGTGAGGTGTTGCAGGCTTGCTGTAGCTTCACTATGTTTCCAACTTGCTTCTAGTAATTCATTTCAGTCTTGATGGTTAACATTTTACTAAAACATATGCCATTCTCATTTTCTTTTTGCTCTAGATCAAGTGGAGATTCCCTTTAAAGTGCTTCAGGAGAGAGTCCCTGGTAAAAAGAAGTATTCCTTAAGGGTTATCAAACCTTCGTCCTCAAAGAAGATATGCAGAAGCGTTAACAGTTATCCCCTTGTCTGTCTGAAGAGGGAGATGGCAGATTAGGCTAAATCACCGAAACATTCTCTCAATGAAAGCCCTATCCAGGGACAAGGTTGAGAGCAATGGCCCCTCATCCTTAGCAGCATTTGTAGAGCCTTACACTGGACTGTTATCATCACTTTGTTTTAAACATGATTGCTGGGGTGACAGAATAAACCACATTCCTTCACCATTACTCCAGTCCTTATTAAGGTAGCAATAATCCAATTATAACCGCAAGTCTGCAATTATAACTGCTGTGCATGTATCTTATTTGTTTAGTTATTTATTTTGTGCTGAATCTTTTCTCAGGCAAGTCATTGAGGGGCTTGACTTCTTGAGGAAGAACAAACTGTATCATGGTAATCTCAATTGGGATTTGATTTTGTATCTTCAACCGTCTACCGTTAAGCTTGCTAACTTCAGAAAACAAGGTAAAACATATATAGTGTAATTGCAATCTGATCACTGATCTCACTTTTACATGTTTTGTACTATTTATCACTGTGTAGCATTCTTAAATTTTGTGACATTTACTCCTTGAATTACTGAGACAATGAGCTTGGAGGAAGCCCAGTGGGCCGATTGGTTGTGCCTTATTAAAATGCTTGAAGAAATTTTAGAAAGAGCTGCTGAAATAAGCTCAAAGCTTGCTCAATGTGATAGATATTTCTGCGGACATGTTGAATCTTTGACTGCTCTATTGAAAACCCTGGATAAGTAAGTTAAAAACAATGCAACATCTTTAGCTGAGATCAGTTCTGTACTGTAGCACTAGTACTTTGATACTGTAGCTGTAGCAGATCAGTTGAGCCTTTGGGTTTTGAATTGTTTTATAATGTAGCAGAGTACTTCTTTGATAGTGTAGTAGATCACTTGAGCCTTTGGATTTTGAATTGTTCTATACTGTAGCAGTACTTTGATATTGTAGCATTATACCGTTGAACATAGTGTAGCGGATCACTTGAGCATTTGGATTTTATGCTCTAATGCAGAGCATCATTTTCCCAAAATTTTCAGGACTGCATTGCCGGCAATTAAAGAAATTGTTCTTGGGCATCCTCTTTTTTGGGATTTGATGACGAGGGTAAACTTCTTTGCAAAGGATATATCACTTAGGTTGAATGATGACACTTTTATGTCAAGAGTGAGAGCTTCAAAAATCCGTAAGCTTCCTTGGAATGAAGGAACAACTCAAGACTTTAAAGGTCTCCTGTTTGAAATGGAAACCTATCGTAAAGATGAAGGAATTCCAGCATATGACTTCAGAAGCTTAAAAGATTATGTACGCTGTGTCTGTGGTGCTTATGCTCACTGGAATAAAATAAAGGTAATGTTTTTTGACATGTATTTTGCATGTGTTGAAAGCCAAATACTCCCTCCGTCCCAAAATATTGCTACCTAGTACTCGATTAGATACCACCTAGTACTATGAATCTGTAGTGGTGTCTAATTGAATACTAGTTCACTATGTTTTGGGATGGATGGAGGTTGTCTGTACTAAGTTCTAACATAAATATTTGCAGCTAAATGTTGACGACATTGTTCGGCAAAACCATCCTACCATATGCAGTGATATCTGGCATCTTCTTGGAAGTTCAGACATGTCGGTAAGAAATATTATTAAGGGTTAAGTCCGATTTTCAACATCACTCTGATATTTTCAGCATACTTAATTCCTTTTGCATTTTTTATTTTTTGCTGTTGCATGAATTTTGCAGCTTTGCAGCAGATCATAGCATGTAAAATCTTTCTTATTTTATTTTATCTTGTGTTATATATATTGTTTCATGCAGCATGCTGATTCTAAGAAGCCAGTTGAAGAGATTAAATTAATATCTGATGTCGTTAGAGATTCACCACACAAGGTAAGTTGCCACAGTCTGAGTTGTTTTATTCTCATCCCTATGAAAGATAGCTATATTTCTAGAGAGAGTTGGTAAAAGAATATTTACAGATAGAAATGCTTGCTTTTCTGGCTTAAATATTTGATACATGCATATCATATGCCTACTGTTATTTTGAACTCAAATCTTGTGTAATTTGGTAGTAGACATCGCAAAAATGTGTTACGGTTGAAAGACACTCTAAAAAGCTGGTAATTTGCTAGAGGACACTTTTGGCTCAATTGGAGAGAGAAATTCTTCAAAAAGACGAGAATACCCCTAGGGACAAAAGCTTCTAACCTAGGAATGCAGTGAAAGATGGAATATGATGTATATATGCTGGCAATGTACATGGGGCCATGGTAGATTTAGAGTTGCATAATTCCCAAATTTTCACTCTAAACCCACGTTTGAAACCTGGGGGCCCTAGGGATATTATCGTCTATTTGAAGAATTTCTCTCTCCAATTAAGCTGAAAGTGTCCTCTAGCTAGTTACCAATAATAATCTACAGCGTCTTTCAGCTACGACATGTGTTTGCGATGCCTACCAACAACTTGCACAAATTTTAAGTGTCATGTAGCAAAATTTGTCTTTGAACTAATGGAATACATATGGGTTTGATTGTTTAAGAATTTTAGTAGCTTTCATTGGATATCTCACTTTTTAACTCTGCAGATTTTCATCGCTGGAATTCCTAGAGTGATTTCATCTAAGATGGTAATATAACAGCATCCACCAGTATATTTGCATAACCTAGTAATCTTCGCTCTGCATGTTGTTATTAAAGCTCTTATACCTGACAAGTTACTGCATTTTCCTCTTTCAGCTCAGGGATATAGTTAGTTCATTTGGTCAATTGGCTGCTTACCGCTTTCTTTTTAATGAAGACCTTGGTGGAGCATGCGCATTTCTTGAGGTCTGGAAAGCCCTGCTTACTCCTAAACTAGAGCATATGGATATACCTCCAACAAACTAATTTCTGATCAATTTGATATGCACAGTACATTGATCACTCCATTACATCAAAGGCATGTGCTGGCCTTAACGGCATGAAGCTTGGTGGATGCGTAATAACTGCTGTTGGCGTGTTAACTGATCATCCTGGGCAGGTTCAAACTTTAAGACATTTTGGATTCATTCATTTACTGCCTTATACATTTTATTGAGTTAAACCCCACTCTGTTCAGGCTGGCAATGAAGCTTGCCCATTTCATGGAATTCCTGCCAATCCCAAACCTCTTCTTGCAGTACCAACACAAGTCCTGCAGCTAAAAAATGTGGTATGTCATAGTGTTAACTCTGTTCATAAGTCTCTCCCAATAGATATCTCTCTTCGTATCAAAATCATTTAGTCGGTAAACAGAACAACCAATTTTTTTCACACTTCTTACATTTATAAAGATGTGAGTTGTTTACAAACTTGCAATAAATGTAGTTTGACCAGGAGGAATACTCGCTGCTTTCAAAATATGAGGTAGATGCAGTATTGGAAGATGTACGTGTGAAGTGTGCAAGGTATAGAAATAATTCTCTTGCATTCTTGCTGTATTACTTATCATGATGGTTTCAGCTTACATTATGGACAAGATTTTGCAGGTATGGAGCTGTGAAATCCATAAATGTCGTAGAGTATCCTGCTGGCAGTGACAACACCAAGGCACCTGCAGTAGATGCTAGAGACAACGCTTTGGCTTCTAACAACACTGCACTCGAAGCTGGCTGTATACTTGTAGAGTTCTTGTGCAAGGAGGCTTCATTCATGGCTGCTCATTCACTCCATGGCCGGCCTTTTGGCAGCAGGATTGTCTCTGCGGGATATGCTCCATATGATCTCTTATCTCTACCTACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005200&oldid=42924"