BGIOSGA005244

From RiceWiki
Revision as of 11:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005244| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005244, complete gene.| tag = OsI_053...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005244

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005244, complete gene.

LocusTag

OsI_05342

Ensembl Transcript ID

BGIOSGA005244-TA

Ensembl Protein ID

BGIOSGA005244-PA

Length

3151

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46666748..46669898

Sequence Coding Region

46666748..46666786,46666883..46667086,46667178..46667474,46667907..46668074,46668167..46668247
,46668358..46668424,46668840..46668937,46669179..46669251,46669340..46669410
,46669527..46669576,46669659..46669771,46669855..46669898

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46666748..46669898 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46666748..46669898 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCCGGCTGCGCTCCTCCGCTCGCCTGCTGAGAGAGCTACGGGAGGCGTCGCGGTCGTCGGGGCGCCGCCGGGAATGGCTCTCCGGCGGCGCAGTAGCCTCCGCCGCGCGGACGACCTCGCTCCTGCACCCTCTGCCCGGGCTCGACGTCCCGCAGTGCCTCCCCGACCAGCTCGGCGTCCAGCCCACCCGCGTCACCACGCTCCCCAACGGCGTCCGCGTCGCCTCCGAGGACCTCCCGGGCCCGTCGGCGTGCGTAGGGGTGTTCGTGGATTCCGGCTCGGTTTACGAGACGGCGGAGACGGCCGGCGTGTCACACCTGCTCGAGAGGCTGTCCTTCAAGGACACGGCGCACCGCAGCCACCTGCAGATTGTGCAGGATGTGGAGGCCACCGGAGGAAACATCGGGGCGTCTGCATCAAGGGAGCAGACGGTGTACAGCTACGAGACTCTCAAGGCCTACTTGCCGCAGGCCATCGAGGTGCTCATCGACTGTGTCCGCAATCCATTGTTCCTCCAAGACGAAGTCGAGCGACAGGAGAACTTCACTGCTGATCGCTTGGTTGTAGCAGCATCAGGTGTTGATCATCAATACCTTTTAGATGTTGCAGAGCCTTTATTGTCTGATTGGCACAAGGGCTCCCCAGTGGAAAGGCCAGAGTCTAAGTATATCGGTGGGGATTTTAGACATAGAGCAGACTCAGAGATGACCCATGTTGCTTTGGCTTTCGAAGTGCCCGGGGGCTGGCTTGAAGAGAGAGATGCCACAATTATGACTGTAGTACAGACTTTAATGGGCGGTGGTGGTTCATTCTCTTCTGGTGGTCCTGGAAAAGGGATGCATTCACGGCTTTATCTGCGTGTCTTAACTAAATACCACACGGTCGAATCATTTTCGGTATTTAGCAATGCATTTGATAGAAGTGGCCTCTTTGGTATTTACTTGACCACGCCTTCAGATTTTGTTGCAAAGGCTGTTGATATTGCGACAAAAGAACTGATTGCTATTGCAACACCTGGACAAGTGACAGACATTGAATTGGCACGAGCGAAAAACTCAACAATTTCTGCCGTGCTGATGAATCTTGAATCCAGGGTAATTGTTGCAGAAGATATAGGGAGGCAGATATTGACTTATGGTTGCAGGAAGCCTGTTGACCATTTTCTTCAATGTATGGACGAAATGACTCTAGATGATATAACAGCTTTTGCCAAGAAGATGTTGTCTTCACCACCCACAATGGCTAGTTGGGGAGATGTTGATAAAGTTCCTCCATATGAATTTGTTTGCAAGAGGTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MFRLRSSARLLRELREASRSSGRRREWLSGGAVASAARTTSLLHPLPGLDVPQCLPDQLGVQPTRVTTLPNGVRVASEDLPGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAHRSHLQIVQDVEATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLFLQDEVERQENFTADRLVVAASGVDHQYLLDVAEPLLSDWHKGSPVERPESKYIGGDFRHRADSEMTHVALAFEVPGGWLEERDATIMTVVQTLMGGGGSFSSGGPGKGMHSRLYLRVLTKYHTVESFSVFSNAFDRSGLFGIYLTTPSDFVAKAVDIATKELIAIATPGQVTDIELARAKNSTISAVLMNLESRVIVAEDIGRQILTYGCRKPVDHFLQCMDEMTLDDITAFAKKMLSSPPTMASWGDVDKVPPYEFVCKRF</aaseq>

Gene Sequence

<dnaseqindica>1..39#136..339#431..727#1160..1327#1420..1500#1611..1677#2093..2190#2432..2504#2593..2663#2780..2829#2912..3024#3108..3151#ATGTTCCGGCTGCGCTCCTCCGCTCGCCTGCTGAGAGAGGTGAGCCAGCCACCGGCGGCCTGCTACTTCTAGTTCTAGGGTTTAGCGGGTGCTTCTCGCTTACGATTTCAGTATGGCTTGTGGTTCGCGTTGCAGCTACGGGAGGCGTCGCGGTCGTCGGGGCGCCGCCGGGAATGGCTCTCCGGCGGCGCAGTAGCCTCCGCCGCGCGGACGACCTCGCTCCTGCACCCTCTGCCCGGGCTCGACGTCCCGCAGTGCCTCCCCGACCAGCTCGGCGTCCAGCCCACCCGCGTCACCACGCTCCCCAACGGCGTCCGCGTCGCCTCCGAGGACCTCCCGGTATTGGATACTCTATGTTCCTCTGCTGTGCTGCGGCGGCGGCGGCGGCGGCGGCGACGAGGCTGACGCTGTGTGAGGGTTTCTGGCGCAGGGCCCGTCGGCGTGCGTAGGGGTGTTCGTGGATTCCGGCTCGGTTTACGAGACGGCGGAGACGGCCGGCGTGTCACACCTGCTCGAGAGGCTGTCCTTCAAGGACACGGCGCACCGCAGCCACCTGCAGATTGTGCAGGATGTGGAGGCCACCGGAGGAAACATCGGGGCGTCTGCATCAAGGGAGCAGACGGTGTACAGCTACGAGACTCTCAAGGCCTACTTGCCGCAGGCCATCGAGGTGCTCATCGACTGTGTCCGCAATCCATTGTTCCTCCAAGACGAAGTCGAGCGACAGGTGCTGGACTCATGGATAGACTAGCCTCTAAGATACAGCTTATTACTAGCTATTTGCAGCGCACTGATCTATGGTTGTTTGGTTTATCAGGTGGCCTTTGCCAGAGAAGAAGTTCAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTTGGATACACAGGTGCTCTGCAATCACTAGTAGCCCCTGAGGAGAGTCTCACACGAATCAATGGCAGTATTATTCAAAAGTTCTATCACGTAATTCTCTTGCTTCTGTATCACATTTGACTTATAAATTACTCATAAATGCGACTCAATTCATGCTGTTCGTAGTTTCCAAACGATGCTAAAATGCAAGTGTAGCTCTATCTCTATAGCTCAGTGCCTCAGTTAACAAATTTATGAAAAAAAAATCTATTACTGAACAGGAGAACTTCACTGCTGATCGCTTGGTTGTAGCAGCATCAGGTGTTGATCATCAATACCTTTTAGATGTTGCAGAGCCTTTATTGTCTGATTGGCACAAGGGCTCCCCAGTGGAAAGGCCAGAGTCTAAGTATATCGGTGGGGATTTTAGACATAGAGCAGACTCAGAGGTAATATACTTCCCATCAACACTACTTTGCCTATTCTTTTGGGGTTTCCTTTTGCTCTAAAATTGAAACCCTGCTCATTCCTCTCCCTGCAGATGACCCATGTTGCTTTGGCTTTCGAAGTGCCCGGGGGCTGGCTTGAAGAGAGAGATGCCACAATTATGACTGTAGTACAGGTATACTTAATGAGTGGGTATTTACTAAAAACAATCTGGCCTATGTTGACATCTGCATCCCAACTGCACTTTCTAACATATATCCATGAATATGCCAAAATATTTTGTAGACTTTAATGGGCGGTGGTGGTTCATTCTCTTCTGGTGGTCCTGGAAAAGGGATGCATTCACGGCTTTGTAAGTAATTATCTCTCGACAACCATTTGACTTTAGTAGGATTGCAAATTGCTACAATATGGAATAATGAATATAGATTAGATTGTGCTTTTAATAGCCGTTGTTGTGTAATTGCTGCTTTTATTTTGCCGTTTTAGTTATTTCAGTTCCTAAAGTTTTTTTTTTAAAAAAAAGGCTATAAGTTGAACTGTTATTTCTTTGCAGATCTGAATCATTCTCTTGACAACCATTTGATAGTAGGATTGCAAACTGCTACAATATGGAATAATGAATATATATTTGATTGTGTTTTTAATAGCCATTTTTGTGTTAGTGCTGCTTGTTTAGTACCCTAGTTTTTTTGGCCGTTTTAGTTATTTCAGTTTTTTAAGTTTTTTTTTGAAAGGCTATAAGTTGAACTGTTATTTCTTTGCAGATCTGCGTGTCTTAACTAAATACCACACGGTCGAATCATTTTCGGTATTTAGCAATGCATTTGATAGAAGTGGCCTCTTTGGTATTTACTTGACCACGGTAAGCTCATCTTTATACATTATTCTGTGCCTCGAATTAAATAGTGAATTATATGAAACATGTTGCAGCTTCTACCTTGAGTTGTTACTTCGTCATTTTATCAAATTGTGTGAGTAGGACTTCAAAAGGGACTAGAGCTGGCAAAGTCTGCTTTTTCAAAATTTTGAAGTGCCATTGCTTCAGTTCGTTTTTGAGTACTAGAAGTTTGAAATACTTTTTTTTTGTTTTTTTATTGGTCCAGCCTTCAGATTTTGTTGCAAAGGCTGTTGATATTGCGACAAAAGAACTGATTGCTATTGCAACACCTGGACAAGGTATATATCATCTCCTGCTTGCCAAAACTGCTTCAGCATCCACTGAAGCTACCTGATCTGAAACTTGATGCGATTTGTATGTATACAGTGACAGACATTGAATTGGCACGAGCGAAAAACTCAACAATTTCTGCCGTGCTGATGAATCTTGAATCCAGGGTAATTTTGGAACCCCCATCCCCAATACACACACGCGCACACACACACAAAAATCTTTCTGACCCTTTTCACAGGTAAGTAACCTGCTTTAGTGTACTTATTTTAATTTGCACCAGGTAATTGTTGCAGAAGATATAGGGAGGCAGATATTGACTTATGGTTGCAGGTAAGGCAATATCTTTCACACTTCATTTTTTAGAAGTCTTCCGCACAGAAATCATTGATTCTTTTCTATTCTGTCACCACAGGAAGCCTGTTGACCATTTTCTTCAATGTATGGACGAAATGACTCTAGATGATATAACAGCTTTTGCCAAGAAGATGTTGTCTTCACCACCCACAATGGCTAGTTGGGGAGATGGTATATATGCTTTATGAATTTGCGAAAAATATGAATGACACAAAATAAGAATTAATGTGAGTTCATTGACTCTCCTTCTGCAGTTGATAAAGTTCCTCCATATGAATTTGTTTGCAAGAGGTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005244