BGIOSGA005292

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Revision as of 11:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005292| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005292, complete gene.| tag = OS01G09...")
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Gene Name

BGIOSGA005292

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005292, complete gene.

LocusTag

OS01G0978000

Ensembl Transcript ID

BGIOSGA005292-TA

Ensembl Protein ID

BGIOSGA005292-PA

Length

3489

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:47269591..47273079

Sequence Coding Region

47269591..47269650,47269877..47270095,47270212..47270296,47270488..47270618,47270708..47270806
,47270890..47270994,47271096..47271170,47272912..47272998,47273035..47273079

Genome Context

<gbrowseImage1> name=IndicaChromosome01:47269591..47273079 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:47269591..47273079 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCTCCTTCGCCGCCGTCTTCTTCAGCAGCGCCTTCGCTGCCTGCTTCGCTGAGGTGTGCACCATTCCTCTCGACACAGCCAAAGTGCGGCTTCAGCTGCAAAAGAAAGCAGCCCTAGCTACAGGCGGAGGAGGAGGGACCACTGGAGGAATGCTGGGCACAATAATGTGCATCGCAAGGGAGGAAGGGGTGGCCGCGCTTTGGAACGGCATCATCCCTGGCCTTCACCGCCAGTGCGTCTATGGCGGACTCCGCATCGCCTTGTATGAGCCTGTGAAAGCCTTCTTTATCCGAGACGGAGATACTGTTGCTGGTGGTGTCAGTTTATTTGCTAAGATCCTTGCTGCTCTTATGACAGGTGTCATAGCAATTGTTGTGGCAAATCCAACTGATCTTGTCAAAGTGAGATTGCAAGCTGATGGAAAGGCCACCACTGTCAAGAGGCACTATTCTGGAGCCCTCAATGCGTATGCTACCATAATCAGACAGGAAGGTATTGGAGCTTTGTGGACTGGCCTCGGTCCAAACATAGCACGCAATGCTATAATTAATGCTACCGAGTTGGCCAGCTACGACCAACTCAAACAGATGTTTCTAAAACTTCCTGGGTTTACTGATAACGTTTTTACCCATCTTTTAGCTGGACTTGGTGCTGGATTTTTTGCTGTTTGCATTGGCTCTCCAGTGGATGTGGTGAAATCAAGAATGATGGGTGACGCAACGTACAAGAGTACACTAGACTGTTTTGCAAAGACATTAAAGAATGATGGACTTCCTGCTTTTTATAAAGGGTTCATTGCAAACTTTTGCCGCATTGGGTCATGGAATGTGATAATGTTTTTAACACTGGAGCAGGGGAAAAATGGAAAGAAAAAGGAAGTCCTAGTCTCATCGCTATAG</cdnaseq>

Protein Sequence

<aaseq>MASSFAAVFFSSAFAACFAEVCTIPLDTAKVRLQLQKKAALATGGGGGTTGGMLGTIMCIAREEGVAALWNGIIPGLHRQCVYGGLRIALYEPVKAFFIRDGDTVAGGVSLFAKILAALMTGVIAIVVANPTDLVKVRLQADGKATTVKRHYSGALNAYATIIRQEGIGALWTGLGPNIARNAIINATELASYDQLKQMFLKLPGFTDNVFTHLLAGLGAGFFAVCIGSPVDVVKSRMMGDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCRIGSWNVIMFLTLEQGKNGKKKEVLVSSL</aaseq>

Gene Sequence

<dnaseqindica>1..60#287..505#622..706#898..1028#1118..1216#1300..1404#1506..1580#3322..3408#3445..3489#ATGGCTTCCTCCTTCGCCGCCGTCTTCTTCAGCAGCGCCTTCGCTGCCTGCTTCGCTGAGGTAAGCACGCTGCGACATCCCCAACCGCCTCAGCTCATCGGTCGATGGGGAAAGAAGAACAACTTTGTGAATCATTCGCTGTGATGCAAGAAAAGGGCATCGATCGTTAGCTTTTAACTGGACAACTAGGAACTATCGAGTCCCTCACTTCCGATTTTAGCTTAGAGTGAGTTTGCTTGTTCTTACTGTAGACACTGATAATGTATCGATTCAACGCTCTCATCAGGTGTGCACCATTCCTCTCGACACAGCCAAAGTGCGGCTTCAGCTGCAAAAGAAAGCAGCCCTAGCTACAGGCGGAGGAGGAGGGACCACTGGAGGAATGCTGGGCACAATAATGTGCATCGCAAGGGAGGAAGGGGTGGCCGCGCTTTGGAACGGCATCATCCCTGGCCTTCACCGCCAGTGCGTCTATGGCGGACTCCGCATCGCCTTGTATGAGCCTGTCAGTTAGTGCTCCTTTCCTTCTGTTTCATACTACTATTTCATATACATTTTCTTCTTTCTTCTGTCAAAGCACTTCATGTCAACACCATTAATTATCCCTTCCTTACCTTGCAGGTGAAAGCCTTCTTTATCCGAGACGGAGATACTGTTGCTGGTGGTGTCAGTTTATTTGCTAAGATCCTTGCTGCTCTTATGACAGGTGGGTACTTTCCCCTATCCGTTTCTCTTTGCTGCACTTTCTCAATAATTTGTCACATATTAAATTGCTTTTGCTAATTAAATGCAGCCAACCAGTTTACATCCAAATTTCATGTGTTAAGGACTTAAGGTAGGTGCACTATGCACAAGTAAATATACTCTTATATTAATTACCGTTCTATATATTCATAGGTGTCATAGCAATTGTTGTGGCAAATCCAACTGATCTTGTCAAAGTGAGATTGCAAGCTGATGGAAAGGCCACCACTGTCAAGAGGCACTATTCTGGAGCCCTCAATGCGTATGCTACCATAATCAGACAGGTTGCTGCTACAATTCATGGTGATCATGAGCAGTAAATTAAAAAAAAATATTCATATTCCCCACGGCCTGTAAATCTTCATATTTTCAGGAAGGTATTGGAGCTTTGTGGACTGGCCTCGGTCCAAACATAGCACGCAATGCTATAATTAATGCTACCGAGTTGGCCAGCTACGACCAACTCAAACAGGTGCCTTTTGATTCTTTCACCTTGTATTCTTGTGGCCACTTTCTATGTGTGTTACTGTTCATCACTTTGTTCTGTTTGTGCAGATGTTTCTAAAACTTCCTGGGTTTACTGATAACGTTTTTACCCATCTTTTAGCTGGACTTGGTGCTGGATTTTTTGCTGTTTGCATTGGCTCTCCAGTGGATGTGGTATGCTCTGCACATGCTGTTTAGGCTCATCGTTCCCAAGTCATGTTATGTTCTACAGAACACTCTGTTACAAAATGTAACTATACATGACTTCCGTGTAGGTGAAATCAAGAATGATGGGTGACGCAACGTACAAGAGTACACTAGACTGTTTTGCAAAGACATTAAAGAATGATGTACGGCAAACCCTTCTCCAAAACTTTCATAGCTCTTCTGTTGTGTTCAACCAAATCTTTTAGATTTTTCGATGCAAATGTATTTTGGTACTATACAACTAATCTTCAAAGTTCAAACACTTGTAGCGAGCACAGAAGTAATTTTCCTTGGGGATTAACGGTTCAACATTTCAGTTAAACATTCCCTTAAAACATTTATGTTCCTCTGCCCTAAATACTTGTCCCTTAAATCGTCCACTCAACTGAAAGGATAGAATATAGCTGACATTCCATTCTAAATAGGATTTCACCTCAAGTAGGTTGAAGAGCCTTATTTTGCCATGACTTCTGATTGGATTGGTCAACTTGAATTTAGGAGAGGTTATGACAGAAACTGGATGCTGCTAAGGAGAATGGATTTTTCTCCGTGACTTCGGATCAAAATCTGAGGCTAAGAACCTTGCGCGTGATGATTCCTAAGCTAATATGCACCAATTCTCTAATTAGATGCATAAGCAGCACATTTCACATTTTCACTTGCTCCTAATGAAGTGTCCAAAGTGTACCCTGCAACCATGGATATTTTATTTGAACTCAGTTCACTAGCTTTACTTTGCCTTGTTGCTCTATATAGTTTTTTCGAATTACATTGTTTTTTTTGGTTCTATTATTCGACTATAGTCTAGTTATATGGAGATTGAATTGTTGATTTGGCCTCTAGTTTTTTATATATTCAGGTATTATGATTGTTATCCTTTCTTAAATCTTTTAGAATTTGCAATCTGTTTGCTTGTTTGTTTGGGGGTATATAGTATGTAAGCTTGACTGGCTGCATTTTACAGGCCTGGTCCCTCTCTAACCCTGTGTGCGTTTTTCCATTTGGATTTTGCTCGTGTTTGTAATTGTTTTGTAAGCAGACCTATATTACTAGGGTTTGCCCATTTTACTAAGAGCGTTAGGGGAAAAAAATAGAGATATTGAGAGCCTATTTGCCATTGAAAAAAAAACTAGCATGTAAAACGAAAGGTGTTTTGAAAATCTTACATGCCCTTAGGCCTTATCTGATTCAAAGGTTTGTTTCCACAAATGTCTACTATCTGATCATACTATCGAACAACAGGAGCAGTGTATTAGATCTTATACTCATTAACTTAACCTTAGCACATACATGATCACCTAAGCTTATGCGGAATGGTGTAATTAACTGAGCGGTTGAGCTTGAGGCCATCTTAGTCGCGGTAGGAGTCGTCGGTTAAGTCGAGGTCGCGGTAGTGGGTCGCCAGAGGTGAAGTAGAGGCTTGCGGTGCGGATGGTGTCGCCCTTCCGGCCTACGTTGGAGAACGCCCTTCGGTCTCCTTCCAGTGCTCCTTAGGATCGGTGTTAGGGTTTATCGGGAGTGGCTTAGTGTATTTAGATCGTCACCTAGATACAACCGGCCTCTCCCTTTTAATATTGTGCTAGAAATCAGGGGCGAATCCGTTATGGAGAATGATGTGGGAACATCGCAAAAAAATAAAAACATGGCATGTCACCAAGTGATCACTTTCTACCACTCAATCAGCGTAGTACATCTGAATATTACACATACAGACATACTAGGCTACCCACAACATAGGGATTCTGTTAAACGTAGCTGTCTCAGTCCTTGGTTTGTTTCTGGTTGCTGTAGATGCTCATGCATGTGGACTAGGTTGTATTCATATCTGATTTAGAAGGCGTTTGCACCACGCAATATTTCTATACTGATGATCCTTTTCTGCAGGGACTTCCTGCTTTTTATAAAGGGTTCATTGCAAACTTTTGCCGCATTGGGTCATGGAATGTGATAATGTTTTTAACACTGGAGCAGGTAACATTCTTTTTTAATGCTATTCTGCTACTTTAGGGGAAAAATGGAAAGAAAAAGGAAGTCCTAGTCTCATCGCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005292