BGIOSGA005326

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Revision as of 02:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005326| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005326, complete gene.| tag = P0452F0...")
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Gene Name

BGIOSGA005326

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005326, complete gene.

LocusTag

P0452F04.18-2

Ensembl Transcript ID

BGIOSGA005326-TA

Ensembl Protein ID

BGIOSGA005326-PA

Length

6546

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37673003..37679548

Sequence Coding Region

37679324..37679548,37678477..37678692,37678102..37678291,37677586..37677752,37676312..37676470
,37675875..37676003,37675706..37675807,37675410..37675556,37675143..37675205
,37674954..37675000,37674811..37674870,37674551..37674633,37674354..37674448
,37673904..37673990,37673665..37673752,37673420..37673505,37673215..37673277
,37673003..37673122

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37673003..37679548 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37673003..37679548 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGACGTTGGCGGCGGCGAGCATGGGGGTGGTGAGGGAGGTGCTGGGGAGCGACGTCGTCGACGAGGTCGACCAGCCCATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCGACTTCGGCGCCCCCGACGGCCACGGCATCTTCGACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGACGAGGAGCACTGCCTCGAGGTCTGCAGTAAGATTTGTGAAAAATTTGGAAAGCATGGCCTGGTAAAACCTAAACAAGCTATGCGAAGCCTTGTCACTCCTTTACGTATGAACGAGGGAATGGACGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTTCATCACGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGCTCAATACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATGCATGCGATTGATGGGATTCCCAAGAACTGCCAGATATTGCATGTTGAGCAAGAGGTTGTGGGCGATGACACAACAGCTTTGCAGTGTGTTCTGAATGCTGATATTGAACGGAAAGATCTAGAGTATGAGGCTGAGTTTGAGCAGAGCGTGTCCAAAAGCAAGGATGGTCTTGACAAAGATGCTATCAGCAAGAGGCTTGAGGAGATATACAAACGCCTTGAGTTTATTGATGCTGATGCTGCAGAGGCTCGTGCAGCATCAATTCTGGCGGGTCTTAGTTTCACTCCTGAAATGCAACGTAAACGCACAAAACAGTTTTCTGGTGGATGGCGCATGAGAATTGCTCTAGCACGTGCTCTCTTCATTGAGCCTGATTTGTTGCTACTTGATGAGCCAACAAATCATCTTGATCTCCATGCTGTGTTATGGTTAGAAACATATCTCCTGAAATGGCCAAAGACATTCATTGTTGTATCACATGCTAGGGAGTTTCTTAATACGGTCGTCACCGACATTCTTCATCTGCATGGACAAAAGCTACATGCTTACAAAGGTGATTATGACACATTCGAGAGGACAAGGGAGGAGCACCTTAAGAACCAGCAGAAAGCTTTTGAAACAAATGAGAAGGCCAGATCCCACATGCAGGCATTCATTGACAAGTTCCGTTACAATGCAAAGAGAGCATCACTTGTTCAATCAAGAATCAAGGCATTGGAGCGAATGGAGCATGTTGATGCGGTCGTCAGTGATCCAGACTATAAATTCGAATTTCCAACACCAGATGACCGCCCTGGACCACCAATCATCAGCTTCAGTGACGCATCTTTTGGTTATCCTGGAGGCCCCACCTTATTTAAAAACTTGAATTTTGGTATTGACCTGGACAGCCGCATAGCAATGGTTGGTCCAAATGGTATTGGCAAATCCACTATACTTAAACTAATATCTGGAGATCTTCAGCCAACTTCAGGGACAGTGTTCCGCTCTCCCAAGGTTCGCATGGCTGTATTCAATCAACACCATGTTGATGGGCTTGATTTAACAGTGAACCCCCTTTTGTACATGATGAGATGCTACCCTGGTGTACCTGAACAGAAACTGAGGGCACATTTGGGTTCTTTCGGTGTTACAGGAAATCTTGCCCTCCAACCAATGTACACTTTATCAGGTGGTCAGAAAAGTAGGGTTGCCTTTGCAAAGATCACCTTCAAGAAGCCACACATTATTCTTCTCGATGAGCCTTCTAACCATCTTGATCTGGATGCTGTGGAGGCGCTGATCCAGGGTTTACTCGTTTTCCAGGGAGGAGTGCTAATGGTGAGTCACGACGAGCACCTGATAACGGGGAGCGTGGATGAGCTTTGGGTGGTGTCGGAAGGCAGGGTGTCGCCTTTCGCAGGCACGTTCAAGGACTACAAGAAGATGCTCAAGTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAATLAAASMGVVREVLGSDVVDEVDQPIIDYIANVLADEDFDFGAPDGHGIFDALGDLLIDARCVADEEHCLEVCSKICEKFGKHGLVKPKQAMRSLVTPLRMNEGMDDKVAPKKQADVFDGPLLSSRDKAKIERKKRKDERQREAQYQTHVAEMEALRAGMPPVFVNHNNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIERKDLEYEAEFEQSVSKSKDGLDKDAISKRLEEIYKRLEFIDADAAEARAASILAGLSFTPEMQRKRTKQFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDILHLHGQKLHAYKGDYDTFERTREEHLKNQQKAFETNEKARSHMQAFIDKFRYNAKRASLVQSRIKALERMEHVDAVVSDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPTLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGDLQPTSGTVFRSPKVRMAVFNQHHVDGLDLTVNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLLVFQGGVLMVSHDEHLITGSVDELWVVSEGRVSPFAGTFKDYKKMLKS</aaseq>

Gene Sequence

<dnaseqindica>1..225#857..1072#1258..1447#1797..1963#3079..3237#3546..3674#3742..3843#3993..4139#4344..4406#4549..4595#4679..4738#4916..4998#5101..5195#5559..5645#5797..5884#6044..6129#6272..6334#6427..6546#ATGGCGGCGGCGACGTTGGCGGCGGCGAGCATGGGGGTGGTGAGGGAGGTGCTGGGGAGCGACGTCGTCGACGAGGTCGACCAGCCCATCATCGACTACATCGCCAACGTCCTCGCCGACGAGGACTTCGACTTCGGCGCCCCCGACGGCCACGGCATCTTCGACGCGCTCGGCGACCTCCTCATCGACGCTCGGTGCGTCGCCGACGAGGAGCACTGCCTCGAGGTACCACGCGCCCGCCACCCTACGCCATCGCCGCCCGCTTGTTGATTTTTATTTTTTATTACTGCTGTGCTGCAATCCCCCATCCACCGATCAGATCGTCGTCCGCCCAACAGTAGCCTAAATGTTTGTCTAATTGAGTAGAGCTTCGCTTGATCAGTGCTGTGATTGAGGTGGTATGGATGCTTATGTGGTTCATCGCCCGTTTGAGCAGAGCTTTAGATTTGCTTGTCATGTATCCCACAGTTTGTATGGCTACTTCTCATCTACTAAAATTCGCTATAGCTTGTTTCGATTTTTGTGCCTGTGTCATCCATTTAATAAGCACTTGACTCATCTTCTGTGGATTCCACATGCCTAGAGAACCTTCTTTAGCACTCACATTTTATGAATAATATTCAGTTGGCTTCCAAGGGCAACAACAATGTAGATCAATCACTGCTTATGTTCTGTAGTGGTCTGTTAGATCTATGTTACTCAACCTCTATTTGTTTCCATAATTTTTTTATTGGCCAGAAGAGAGCTGCAACAACTATCTTGAAAGACGAAACATTGAGAGGGAAAACAAGGAACTCCTGTATTCTGATTCTGATTTAGCAGGACCATGATGCATTTTCTTTTGTTTTCAATATAGGTCTGCAGTAAGATTTGTGAAAAATTTGGAAAGCATGGCCTGGTAAAACCTAAACAAGCTATGCGAAGCCTTGTCACTCCTTTACGTATGAACGAGGGAATGGACGATAAGGTTGCCCCCAAAAAGCAAGCTGATGTATTTGATGGACCCTTGCTTTCATCACGTGACAAAGCCAAGATTGAACGGAAGAAGAGAAAGGATGAGAGACAAAGAGAGGTAAGCTGTTCTCTATGTTGGTAATTGATCATTTTACACTACCAGAGGATGATGTGCTTGTCTTTGGTGAAGAAAAAAAGATTAGTGGTGGAAGTGTTTTTTTTTGTGACAAAAGTATATCTGCTGCTGGAGATGCTTTCCTTCCTGATGTTATCTTGTTGCACACTGTCCTTTTATTGGTGCAGGCTCAATACCAAACGCATGTTGCTGAAATGGAGGCACTTAGGGCTGGAATGCCTCCAGTATTTGTAAATCACAATAACTCTGGTGGGCCAGCTGTTAGGGATATCCATATGGAGAACTTCAGTGTTACTGTTGGTGGTCGTGATCTCATTCAAGATTGCACTGTAACACTTGCTTTTGGGAGGCACTATGGTGAGTTACAGCATAGGTTTCTTCTTGAGCTGTTGTTCACTTCGTAGCTGGCATGAATAACTTAGGAATGAGGAATGAAACATTTGTAATCGTATATGTCAAGTCACACATATCTCTGCAACACTTTTCCTTAATAGCGTGCCTAACTGTCTATGCTTTACCAAAGCCAAAACTAAATTGCACAAATGCCAAACTTGTTAATTCTGTCTGTACTAGTCAGTGGTTCAGACCCTCGATGTGCTTTTGATCTGTGCAACTTTTCATCACCTCTTGCCTTGAAAGTTTTCTGTATAAGTTCCAGGTTTTTTTTTTATCCCAATGATTTCGATAATTTCCATGCACACTTCAGGTCTTGTTGGAAGAAATGGTACAGGGAAAACCTCTTTTCTCAGAGCTATGGCGATGCATGCGATTGATGGGATTCCCAAGAACTGCCAGATATTGCATGTTGAGCAAGAGGTTGTGGGCGATGACACAACAGCTTTGCAGTGTGTTCTGAATGCTGATATTGAACGGGTTCAACTTTTGCAAAAGAAGCTCATCTGGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTAACATTTTAAGATATGTATGTCCTGTTATATTTAGCCATTCAGTTGCTTTGCTAATAGTTTGGCGATTCCGTGCAGAAAGATCTAGAGTATGAGGCTGAGTTTGAGCAGAGCGTGTCCAAAAGCAAGGATGGTCTTGACAAAGATGCTATCAGCAAGAGGCTTGAGGAGATATACAAACGCCTTGAGTTTATTGATGCTGATGCTGCAGAGGCTCGTGCAGCATCAATTCTGGCGGTCTGTTTCTGGGCATCCAATACCTGTTATTTTTTCTTGCTTGTACAATTTGTACTATGTAGGATTGTATCTTTTGTTTCACTTCCAATTTTCTCGTTGCAGTTACATTGGTTGCATACCTATCATTCATTTAGTTATCAATATACTTTCAACAACAAATAATCTTTATCCCAGGCTATCACGTTTTCTTGCTGGTTATTGCATGAAATTGAACATTTCATAACTCATATCCTGATTATTCCAGTAGAATATGCCCTTGCCAGAGTACGCACTTTATTATATGTTCTGATTGGTGGAACTCTTTCCAGGGTCTTAGTTTCACTCCTGAAATGCAACGTAAACGCACAAAACAGTTTTCTGGTGGATGGCGCATGAGAATTGCTCTAGCACGTGCTCTCTTCATTGAGCCTGATTTGTTGCTACTTGATGAGCCAACAGTAAGTTTAAAAACATGAATTTGTTTCATCTCTTTCTGGCCTATGCTAACAAGATATTATTTTGCAGAATCATCTTGATCTCCATGCTGTGTTATGGTTAGAAACATATCTCCTGAAATGGCCAAAGACATTCATTGTTGTATCACATGCTAGGGAGTTTCTTAATACGGTATGCAGTATGATGATTATGATCATGTCATATTATCATGAAGGAGCTAATTTTGACAGAGCGTCCTTAATTCATATGTAGTATATTTGCATGTGCATTTTTTTCCTTGTCATGTAAATCACTTAATGCTGATAGCAATAAATTCTTAGGTCGTCACCGACATTCTTCATCTGCATGGACAAAAGCTACATGCTTACAAAGGTGATTATGACACATTCGAGAGGACAAGGGAGGAGCACCTTAAGAACCAGCAGAAAGCTTTTGAAACAAATGAGAAGGCCAGATCCCACATGCAGGTTGGATCTGTTTCTACTTTCTAGCAAGTACCATAGCCTCAAAAATTCGTTGAGAGACCTAACTAAGCTCAGAAGAACTGTTTGTCTAGTCTAAGCTAAAATTCAAAAGCTTAATTGGGCTATCTGAAAACATTCAACTACTATGTGCAATTAAATCCTTATTGAAAAGTCGAAGTGAAGTTTATTGGTCTTTCTTCTGTGTAGGCATTCATTGACAAGTTCCGTTACAATGCAAAGAGAGCATCACTTGTTCAATCAAGAATCAAGGTGACTTTGCTTGCTCACATCCCCCATCACTCCATTGAATTTCTGCAAATCCAAATATTACCTTTGCTATTGTTTCACTTAAGAGTCGTCCAGTGATAACTTTAGTCTGTGCCTTAATATTTATTTATCTGTATTCACTAAGGCATTGGAGCGAATGGAGCATGTTGATGCGGTCGTCAGTGATCCAGAGTATATCACCGCATCTTAAATCTGTTGTGTTTATTCTTTTATATGCAATCAGCTTAGATAGTTGCCTGAATAATTCTTTGCAGCTATAAATTCGAATTTCCAACACCAGATGACCGCCCTGGACCACCAATCATCAGCTTCAGGTTTCATTTCTGATATGTTTTCTTTCAATGTTTAACGAAATTTGTTCTCTTCCCATGTGCAACCATGGTTTCTTGTTCTCTGGCTTGCTACTATATTTGTAATTCTTTCTAGCTTTCTTATTAAGATCTAGCAGTTACTACATTCTGAGGTATTTATGTTACGATCTGTTTGTGCAGTGACGCATCTTTTGGTTATCCTGGAGGCCCCACCTTATTTAAAAACTTGAATTTTGGTATTGACCTGGACAGCCGCATAGCAAGTATGTTGCTTTGCTTCACTCATCTTACTAACAAAGAATGATACCTAGTATTTCTGCACGATGCATCTTTTTTTTGGTCTCATGTTTGATCTGTTATTTCAGTGGTTGGTCCAAATGGTATTGGCAAATCCACTATACTTAAACTAATATCTGGAGATCTTCAGCCAACTTCAGGGACAGTGTTCCGCTCTCCCAAGGTTCTTTTATCCTTCTGAAGCTACAGTCATGACATTTCACTACTTAGCATTACCGATATTACATTAATTCTGATTGGCATGATTGCATAGTTTCTACATGGAGCCATGGAGGTTCACAATAGTTTTATAATGAGATTCTGGAGTGTACATTCTCCTGTCTGTATCAATGTCATTACTGAATTAAACAGAGAACTCTGAACCTGGACCTTTATATTTGAATGTATTTTGCCTCTTACCTGTATAGTTTGACCACTTTGCTAGTGATAATTTTGTTATAATATAACCTTTTATTGCCAGAGTTTCATCTGCTACATCTTATCTGCGGTTTGTTGATTTATTTATTGCTGCGGCTGTTATTTGCAGGTTCGCATGGCTGTATTCAATCAACACCATGTTGATGGGCTTGATTTAACAGTGAACCCCCTTTTGTACATGATGAGATGCTACCCTGTAAGTTCAAGCATCATTTTTATCTTTCCTTTACATCCAGCAACAATTGCTAGGTTGCACCATGAAGTTCACAGTGTATGGATCACCAAACATACAGTCTGTCATTTAACGTTGATCTAAGTATAAAAAATGTATTATATGCTCTTTGCAGGGTGTACCTGAACAGAAACTGAGGGCACATTTGGGTTCTTTCGGTGTTACAGGAAATCTTGCCCTCCAACCAATGTACACTTTATCAGGTAATGAGAGCGTTTTGATAGATGTCTTAAGCATATTAAAGGCTGCATATGGCCTTTCCCAGTTTCATGAGAAATTGAGAACTATCCTCTTGCCCAATGATTCATCTGCTCGTAGAATCTTAAATTTGTCAGTCCTGATTAGAGCCTTTCCAATCCCAGGTGGTCAGAAAAGTAGGGTTGCCTTTGCAAAGATCACCTTCAAGAAGCCACACATTATTCTTCTCGATGAGCCTTCTAACCATCTTGTAAGTAAATCACCCTGTTTTTTTTTATATGTTCTTTTAGGTGGATATCTTTTTTCCCCTCTTTGTAAGGGAGTTTCAGTAGCGATGATTTACACGCGAGGATAGGGAAACAACTTAACATGTTTGTTTGTGTGTGTTGCAGGATCTGGATGCTGTGGAGGCGCTGATCCAGGGTTTACTCGTTTTCCAGGGAGGAGTGCTAATGGTAAAACTAAGATCGTTCATTTTGGTGTAAAAGCTGATGACTTGGCATCATTCTAATTACAAGCTATATGGGTGACTTGTTATCTTTTACAGGTGAGTCACGACGAGCACCTGATAACGGGGAGCGTGGATGAGCTTTGGGTGGTGTCGGAAGGCAGGGTGTCGCCTTTCGCAGGCACGTTCAAGGACTACAAGAAGATGCTCAAGTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005326