BGIOSGA005677

From RiceWiki
Revision as of 02:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005677| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005677, complete gene.| tag = P0643A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005677

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005677, complete gene.

LocusTag

P0643A10.22

Ensembl Transcript ID

BGIOSGA005677-TA

Ensembl Protein ID

BGIOSGA005677-PA

Length

2550

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32518312..32520861

Sequence Coding Region

32520824..32520861,32519677..32519758,32519556..32519588,32519339..32519460,32518526..32518687
,32518312..32518429

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32518312..32520861 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32518312..32520861 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCTCTGGGACTCGCTCCTCAACTGGCTCCGAAGCTTGTTTTTCAAGCAGGAGATGGAGCTCTCCCTGGTTGGCCTGCAGAATGCTGGGAAAACATCACTTGTTAATGCTGTTGCTACAGGTGGCTACAGCGAAGACATGATTCCAACTGTAGGATTTAATATGCGAAAAGTCACAAAGGGGAATGTTACGATTAAACTTTGGGATCTTGGAGGGCAACGGAGATTCCGGACCATGTGGGAGCGCTATTGCCGTGGAGTTTCTGCAATCCTATATGTGGTGGATGCTGCTGACCGGGATAGCATTCCGATAGCTAAAAGTGAATTGCATGACCTGCTGACAAAACAATCTTTAGCTGGGATTCCTTTACTAGTCCTTGGCAACAAAATTGACAAGTCAGAAGCTGTTTCAAAGCAAGCGTTGGTTGATCAACTAGGCCTGGAATTGATAAAGGACCGGGAAGTTTGCTGCTACATGATCTCTTGCAAGGACTCTGTAAACATAGATGTTGTCATTGATTGGCTTATCAAGCACTCCAGAACAGCAAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLIKHSRTAK</aaseq>

Gene Sequence

<dnaseqindica>1..38#1104..1185#1274..1306#1402..1523#2175..2336#2433..2550#ATGGGGCTCTGGGACTCGCTCCTCAACTGGCTCCGAAGGTCTCCCCCCGCCTCGCTCTCTCCCTTCTTCTTTTTTCCGCTTCGTGCATCTCAGTTCAGTCCCTTCTGTGGGGACGAGATCGTCCATGTGTTTCGGGTTGAGCGGGAGGTAGGGTTTGGTAGGGATTGGTTTGGATCGGGCTCCCCTGTGCGGCGGCGGGATGATGGGGCGGGGCTGTGGAGTGGAGTGGTTTGTGTGGCATGTGCGGTTAGATCCAGGATTGGTAAAGCTTGTCAAAATCGGATCGTTGTTAGGTCGGTAGATTTGAATGTGGTTAGTATCTATGAAGCTTGGGATTACATTAGTATAGCCCGTGGAACCAAATCTTCTACTCTCTTTAAGGATGGTTCTTACAGGAAACTCTGTAATTCTTTTGCATCCTTACCCTGACCTAGCTTCCTTTACACGTGAACAAATGTCTGAGAGAAATTTAGGTTTGTTGAAAATCTATCTTTTTAACTTTGTATTTTTGCTGTTATCCAGGACTCCCAACAGTTTTACCATGTCCAGTAACATTGAGTAATTTAGGGTGAATTGGGATCTTTTGTTAATATTTTGTTCTAATTTCCTATATAATCTTTTCTGCTGCTCTCGAAGGGGTTTGTTGAACTCTTTTCGGTAAATTAGCTTTCAGCAATCCACCTAAGCCGCTTCACTTTAGCTTCCCATTGAATTTTGCCACATAGATACGTATGCCCCATGTGAACTCGGACACACCTGGCAGCTATGATAAAGGAGGAGACCTAGACATAGATCCTGGCTGGCACGAAGCACTTAGTGGATCTAATGGAGTTAACCTAAGTGAAACATGTTCCCCCTTATTGCATTTGCATCCAAATCTGTGTTATTTTTCTTACCTTTCAACCTTTTCTCCTCCAATTGACCTCACAACTGTTCTCCTGCCTTTCAAATTACAGAGGAAAACTACTAGGTGCTGCCATAATACCAACTTAACTTCCTAGTAAAATATTAGAACATACGCCAATATTAAGTACTATGCAACATGTTTCCTTATAAACATGTCTAGTGAAAGGTTTACTCATGACAATTATGTCCTCCACCAGCTTGTTTTTCAAGCAGGAGATGGAGCTCTCCCTGGTTGGCCTGCAGAATGCTGGGAAAACATCACTTGTTAATGCTGTTGCTGTATGTATCATCTAACGGAATCTTTATTTATCTTACCATTTTAATGTTATGCCTGGTGGTTTTAATTCGTTGCTGGCATGCTTCTCAGACAGGTGGCTACAGCGAAGACATGATTCCAACTGTATGTACATATCACTGCTTCTTAAGTCTTAATTTGTAGAGGTAGTATTGCTATCTAATTGACCTGACTTATACTTGTCCATATTCTGAAACCAGGTAGGATTTAATATGCGAAAAGTCACAAAGGGGAATGTTACGATTAAACTTTGGGATCTTGGAGGGCAACGGAGATTCCGGACCATGTGGGAGCGCTATTGCCGTGGAGTTTCTGCAATCCTGTAATTTCCTGCACACTTAAGCTATCTGTTATGCACTGTATTTAATTCTCAGGATGATTAAATTGGGGGAAGACACAATACATAACCTTTATGACAACAGTGGTAGTAAATGGTATGCATGTAGCTCGGAGCCTAGGATATACCTGTGTATGTATAATACTGGCTCAATGGCTTTATATTTGCGATTTTGGTACCACACATCTCTTCATCTCACCCAAAATCGGGAAAAAAAATGAAGAAAGGTTCTATATTGGTGGTATTGAAGTGGTAAAAAAATAAATTGAGTTTTACCCAAAAAAAAAAAGAAATTGAATGGAGTTCTATTTTGGTGGTATTAGAGTGTACCTTAAGATTTTTGTTGGTATAAAATTGAACGTGTGATCTTTGATGGCATGGAATTAGTTTCTCCTTATATTTCATACTTCTTGGTACCTACCAAGAACAATAAAATGACTGTTCGGAATAGGTAGACGTTTCAAACACAATAACCTTGTTACTATTTATTTCTGTGTTTGGTGAGTTATATGTATTGATGCATGGCCAATTGACTATACTAGCTGCATGATGCTTGTTTCTTGCTTCTGTGTTCTATCCAGCCTAACTACCTAATGGTGGAATTGTTAAGAATAATTAACTGACATTCAATTGCAGATATGTGGTGGATGCTGCTGACCGGGATAGCATTCCGATAGCTAAAAGTGAATTGCATGACCTGCTGACAAAACAATCTTTAGCTGGGATTCCTTTACTAGTCCTTGGCAACAAAATTGACAAGTCAGAAGCTGTTTCAAAGCAAGCGTTGGTTGATCAACTGTGAGTTTACTACCTTTTCTGTGTGAGCTTGTCATCCTTGAGTGGCTAATTACTGAATGATGTTTCAACTGAAGTGGTCTTTCTCATGTATTTCAGAGGCCTGGAATTGATAAAGGACCGGGAAGTTTGCTGCTACATGATCTCTTGCAAGGACTCTGTAAACATAGATGTTGTCATTGATTGGCTTATCAAGCACTCCAGAACAGCAAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005677