BGIOSGA005740

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Revision as of 02:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005740| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005740, complete gene.| tag = OJ1479_...")
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Gene Name

BGIOSGA005740

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005740, complete gene.

LocusTag

OJ1479_B12.23

Ensembl Transcript ID

BGIOSGA005740-TA

Ensembl Protein ID

BGIOSGA005740-PA

Length

5357

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31486750..31492106

Sequence Coding Region

31492017..31492106,31491099..31491271,31490767..31490879,31489977..31490165,31489821..31489888
,31489617..31489700,31489321..31489374,31488724..31488804,31488544..31488637
,31488365..31488438,31488187..31488297,31488052..31488096,31487892..31487948
,31487665..31487769,31487465..31487581,31487268..31487371,31486987..31487152
,31486750..31486878

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31486750..31492106 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31486750..31492106 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCGACTACGGCGTGCCGCGCGAGCTCTCGGAGGTGCAGAAGAAGCGCGCGCTCTACCAGCCCGAGCTGCCCCCCTGCCTCCAGGGCACCACTGTGAGAGTGGAGTATGGTGACGCTGCAATTGCTGCTGATCCTGCAGGCGCTCATGTGATCAGCCACGCGTTCCCCCACACATACGGGCAGCCCCTGGCCCATTTTCTCCGGAAGACGGCTAATGTCCCCGATGCTACTGTCATATCAGAGCATCCTGTTGTCAGGGTTGGTGTTGTTTTCTGCGGAAGGCAGTCCCCGGGAGGCCATAATGTCATCTGGGGACTCCATGAGGCAATTAAGGCTCACAACCCAAACAGCAAACTTATTGGTTTTCTTGGTGGAAGTGATGGTCTTCTCGCACAGAAAACTTTGGAGATTACCGACGAAGTTCTTTCTTCATATAAAAACCAAGGTGGTTATGATATGCTTGGCCGGACAAAGGATCAAATTAGAACAACAGAGCAGGTCAATGGTGCCATGGCTAGTTGTCAGGCTTTGAAGTTGGATGCTTTAGTAATCATTGGAGGTGTTACATCCAATACGGATGCTGCTCAACTTGCTGAGACTTTTGCTGAGGCTAAGTGTGCAACGAAGGTTGTAGGTGTTCCTGTAACTTTGAATGGGGACCTTAAGAATCAGTTTGTTGAGACAACCGTTGGTTTTGATACCATATGCAAGGTGAACTCACAACTTATAAGCAATGTATGCACCGATGCTCTTTCGGCTGAGAAGTATTACTACTTTATTCGCATGATGGGGCGGAAGGCTTCTCATGTGGCATTGGAGTGTGCTCTTCAATCACATCCGAATATGGTTATCCTAGGTGAGGAGGTTGCTGCATCAAAACTTACCATCTTTGATATCACGAAGCAGATATGTGATGCAGTTCAGGCAAGGGCTGAGAAGGATAAGTATCACGGAGTTGTACTTATTCCGGAGGGACTCGTGGAGAGTATTCCTGAATTATATGCTTTGCTTCAGGAAATTCATGGGCTTCACGGCAAAGGTGTTTCCATGGAGAATATCTCCTCACAGCTTTCACCTTGGGCATCTGCACTATTTGAGTTTTTGCCCCCATTTATTAGGAAGCAGCTACTTCTCCATCCTGAATCTGATGACTCAGCTCAACTTTCTCAGATTGAAACCGAAAAACTTTTGGCCCAATTAGTTGAGGATGAAATGAACAGGCGTATGAAGGAAGGCACTTACAAAGGAAAGAAATTCAATGCGATCTGTCACTTTTTTGGCTACCAAGCTAGGGGTTCACTGCCTTCAAAGTTTGACTGCGATTACGCCTATGTTCTTGGGCACGTGTGCTACCACATCTTAGCTGCTGGTTTGAATGGTTACATGGCTACTGTGACAAATCTTAAGAGTCCTGCGAACAAATGGCGATGTGGTGCGGCTCCGATTTCGTCTATGATGACCGTGAAGAGATGGTCACGTGGTCCTGCGGCTACTCAAATAGGGAAACCTGCTGTCCATATGGCTACTGTCGACTTGAAAGGCAAAGCATTCGAGCTATTGAGGAACAATTCTACCAGCTTCTTAATCGACGACATCTACAGAAACCCAGGACCACTCCAATTCGAAGGAGCAGGTGCTGATTCAAAGCCTATTTCACTGTGCGTGGAAGATCAAGACTATATGGGCAGGATCAAGAAACTCCAGGAATACTTGGAGAAGGTGAAAAGCATCGTGAAGCCTGGGTGCTCGCAGGATGTTCTCAAGGCAGCGCTGAGCGCTATGTCATCTGTGACCGAGACATTGGCGATCATGACATCGTCTTCCACTGGCCAGGGAACCCCACTCTGA</cdnaseq>

Protein Sequence

<aaseq>MDSDYGVPRELSEVQKKRALYQPELPPCLQGTTVRVEYGDAAIAADPAGAHVISHAFPHTYGQPLAHFLRKTANVPDATVISEHPVVRVGVVFCGRQSPGGHNVIWGLHEAIKAHNPNSKLIGFLGGSDGLLAQKTLEITDEVLSSYKNQGGYDMLGRTKDQIRTTEQVNGAMASCQALKLDALVIIGGVTSNTDAAQLAETFAEAKCATKVVGVPVTLNGDLKNQFVETTVGFDTICKVNSQLISNVCTDALSAEKYYYFIRMMGRKASHVALECALQSHPNMVILGEEVAASKLTIFDITKQICDAVQARAEKDKYHGVVLIPEGLVESIPELYALLQEIHGLHGKGVSMENISSQLSPWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAQLVEDEMNRRMKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATVTNLKSPANKWRCGAAPISSMMTVKRWSRGPAATQIGKPAVHMATVDLKGKAFELLRNNSTSFLIDDIYRNPGPLQFEGAGADSKPISLCVEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSVTETLAIMTSSSTGQGTPL</aaseq>

Gene Sequence

<dnaseqindica>1..90#836..1008#1228..1340#1942..2130#2219..2286#2407..2490#2733..2786#3303..3383#3470..3563#3669..3742#3810..3920#4011..4055#4159..4215#4338..4442#4526..4642#4736..4839#4955..5120#5229..5357#ATGGACTCCGACTACGGCGTGCCGCGCGAGCTCTCGGAGGTGCAGAAGAAGCGCGCGCTCTACCAGCCCGAGCTGCCCCCCTGCCTCCAGGTCCGCACCCACCCATTGCCGCTAATCCTCCTTCCCCTGCGTGCGACATTGCGGTCCCTGGCGCGGCTTCCCGGCCCTAGATCTGCGTGCTTCCGGACCGCGCGGCGCCAGATCCCGCGCCGCTCCGGCGTCCGGATCAGTCCATCTCACCGGCGCTGGTCGTGTATACTGTTCGTCTGCTTCCGATTTGATTTCTCGGGGGTCTTAGGCCATAGGTTTACGTGTATCAGCTGTCAGTCTGTCACTCGTTTTCGGGGAACCAGATTGGATCTGAATTGTGCTGGACCTCGCCTGCGAGGTGCAGGGCTCTGTCTAGCAATGTACTAGTAGATCCAACCGGCGTGCCTGGCTTGCGGGAGGCTGCGTGCGCGGGGGAATTTTTTTTTTGAAAGCTCGTTTTGCCGTGTTGGTATTGTCGTGTTGCTGTTTTATTTATGAGTTTAGTAGTGGAGCGTAGCAACTTGGAATAAACAGTAGAGGGATTGATTCGTCTACAGCAACCATGGACTTTTCTTTTTGGACTAGCTTTCACGGTCCTGTGTTGTGTTGTTTACTTTTGTGGTGACCCATGAATCGCTATCAAATCGTAAGACTTTCTCCTGTTTAGTTATGCTGTTTGACTGGTGGCTGGATCGGATGAATTCATGATAATTTTGCGAATGATTTTCTCGCGTGCGTGTGATTGGTGGTGGATGAATGATTTTGTGAATTCACGCTCTGAATTTCTTCACTCCATGTAAATCAGGGCACCACTGTGAGAGTGGAGTATGGTGACGCTGCAATTGCTGCTGATCCTGCAGGCGCTCATGTGATCAGCCACGCGTTCCCCCACACATACGGGCAGCCCCTGGCCCATTTTCTCCGGAAGACGGCTAATGTCCCCGATGCTACTGTCATATCAGAGCATCCTGTTGTCAGGTATATATGTATTTTTTACTTGTGATATTCAATTTTTTTACTTGATATGCCATCTGCTGCAAGACAAGAAACTGTTTCGAAAAAAAGAAACCAAATACTAGTAGTAAAGTATTTGTCAAATTATAAGAGAATGCTGGAGAGAAATTACATCAAATTATTTGTCTTCGCCTCTCACTGCCTGCACATATAAGACATCTGATTGTTTTGTTTTGGATGCAGGGTTGGTGTTGTTTTCTGCGGAAGGCAGTCCCCGGGAGGCCATAATGTCATCTGGGGACTCCATGAGGCAATTAAGGCTCACAACCCAAACAGCAAACTTATTGGTTTTCTTGGTGAGTCCTTTGATATGCAACTATGAATGTATTAATAGTTCGTTCCCTTTGTTCTCATGTCTGCTTGTTGCGTCCAATCAGACTTTCAGCGTTTGCTTAAATAGCTTCACAAGCTACTTAGCACACTATGTGTTGTCGACTTCCCCTAGCAGCCACCAGTGTTTTAATTTGAATTAACTCAACATTTTTGTTATATTTTATTTGTTTTCATTACCTTAGCAGGTGATCACAACTGTATAGCATCAATACATCATTTAGTATTTTTGTCACATAAGTAGTGACATCTAAAGCTCTTCAACCGAACTTTGCTAGGTCCACTTAATGAAATTAACAACACAGTGACATACCTATACTAAAAAAAAAACAATCAGTGATGCTTTGCTACAAGATCTTGGACAGAGTACCTATCTTTCTTAAGTGTCTAATCCAAATCAAATGAGTTAATTTTGTGATTGGCATCCTGTGCATGAATCCCCCCAAGGCGGGCTTCTGTCTCTCATGCCTGCTTTTCTGAACATGTCTAACACTTGGAGCTAATGCTTACAGATTTTCTTTAACTGTTTCTTATGTTTGTGTTTATTTCGTTCTTTTGTTGAAACAGGTGGAAGTGATGGTCTTCTCGCACAGAAAACTTTGGAGATTACCGACGAAGTTCTTTCTTCATATAAAAACCAAGGTGGTTATGATATGCTTGGCCGGACAAAGGATCAAATTAGAACAACAGAGCAGGTCAATGGTGCCATGGCTAGTTGTCAGGCTTTGAAGTTGGATGCTTTAGTAATCATTGGAGGTAGGCTTTGTGGCATTAGTCTACTAAATAGCTACATTGTGTATATTTTTTTTAATCCTAACATCTGTTTAATTTCTGGTTTCTGAAGGTGTTACATCCAATACGGATGCTGCTCAACTTGCTGAGACTTTTGCTGAGGCTAAGTGTGCAACGAAGGTATATCATAATTCCCTTTTCTTGTTGCAGTCCGTGCCTTGGTTCCTGATTCCCTATTTCCATTGCAAGTGTATGTTTTACTTGCCTGTAAATGGCATGACACAATTTATTATTGAACAGGTTGTAGGTGTTCCTGTAACTTTGAATGGGGACCTTAAGAATCAGTTTGTTGAGACAACCGTTGGTTTTGATACCATATGCAAGGTAGCTTTACATTACTATGCTGGGGCTCCATTTACCTTTACTGTCCTTCCATTACCTCTATATGATGCATAACTGACCTGTTAGGCATGTTTGGTTTTGTCAATTGAGGTTGTTTATGTATGCGAAAGTGTGTTTTTTGTGCTATGGATAACTTTCCAAGTTGCCCATTCAAAAATACTACGCATTTAATTTACCACTTTGCAATTTTTATTTATTGTTGAACTTATTTATTATTATAACAGGTGAACTCACAACTTATAAGCAATGTATGCACCGATGCTCTTTCGGCTGAGAAGGTAATATCTAATATGGTTGATCCGCTTCTTCTTTAGTTGGATGTACTTTCGTGTCTGTGATACTATTTAGCTATGGTCAATTCCTTTATTTTTTTCTCAGAATTAAATAATCAAATTGAATTGAGACAGTAAAAAAAACTCTGAATTGATACTGTTAAGTCCCAGTACAGAAAGAGCTAAACAAGTATAGAACACGGGCTATAATTTGCGGTTCACTCCTTAGTTCGGCCTATGTGGGAGGTTCACACTTCACACACAGGTGTACACAATCTTTGTATAGGCAATAAAGGATGCCAATACTGATTGATAACAATGCAAATTCGCCTAGGTCCATTAGACAACTGAATTATCCTTTTTCTTGGGGTTCCATGGTCCATTTGTTCTTCAGTATTTCTCTCAGCGTGGTTATTCAGTAGACATACTTTTCCAGCAAGGCCTGCTGAGCCTTCCTGTTTACAAATTCACATTACAAAAGTAACAATTTTATATGCCTTGTGGTTGTATTCTTTCTGGCAGTATTACTACTTTATTCGCATGATGGGGCGGAAGGCTTCTCATGTGGCATTGGAGTGTGCTCTTCAATCACATCCGAATATGGTTTGGACTTTTCAACTTTTCGCTTATGCTTCCTGAGTTGCTGCAAATTCTTCTTGCATTTGTTTGAACCTGTATCATATGTTCAGGTTATCCTAGGTGAGGAGGTTGCTGCATCAAAACTTACCATCTTTGATATCACGAAGCAGATATGTGATGCAGTTCAGGCAAGGGCTGAGAAGGGTAGGGGCCTTCTATTGTGATATGCTCATGTAACCTTGCTTTCACCAATGAAATGCCATTTTGTGAAAATTTATGAATTTACATAACCTTATATTTGTTGCACAGATAAGTATCACGGAGTTGTACTTATTCCGGAGGGACTCGTGGAGAGTATTCCTGAATTATATGCTTTGCTTCAGGTAAGTTTGTACATGCCATATGGCTATTCATTTACAACATTTCTAAGTGGCATCTATGTAATTGTAGGAAATTCATGGGCTTCACGGCAAAGGTGTTTCCATGGAGAATATCTCCTCACAGCTTTCACCTTGGGCATCTGCACTATTTGAGTTTTTGCCCCCATTTATTAGGAAGCAGGTGTGTATTGTCTGATACTCATCTATCAACTCTTGGACATTCATAACTCTCATCAGGTCTCTGATATAGCATTGTTGTTTTCTGATGCAGCTACTTCTCCATCCTGAATCTGATGACTCAGCTCAACTTTCTCAGGTATATTATAGTATATGCAGCAATACTTTCAGTCATTTGCGTATGCTTTTTTTGTTTCATTTCATTATGTCTGATTACAACCTCCACATGGTTACCGGTGCAGATTGAAACCGAAAAACTTTTGGCCCAATTAGTTGAGGATGAAATGAACAGGCGTATGGTATGCTTTCTGCAGCCTTTCTTGTAACTGTCTCTTGGTTCTGAGGCATTACTGATGTCTCAGTCTACATGTGGAGTGAGTAATATTTATATTGGCTCATGATGTTCTTGGTATCTCTGCAGAAGGAAGGCACTTACAAAGGAAAGAAATTCAATGCGATCTGTCACTTTTTTGGCTACCAAGCTAGGGGTTCACTGCCTTCAAAGTTTGACTGCGATTACGCCTATGCAAGTTTCAGCTCACCTTTCTACTTGGACAAAGCAATTTTATTTTGCTGTTGATTAATTATATGTATGTTGTTTGGCTTCAGGTTCTTGGGCACGTGTGCTACCACATCTTAGCTGCTGGTTTGAATGGTTACATGGCTACTGTGACAAATCTTAAGAGTCCTGCGAACAAATGGCGATGTGGTGCGGCTCCGATTTCGGTGAGATTACTACTGTGCACCCCCTTTTGGCAAAATTAGATGAGTATGATATGAATGAAGGGAACACCTAACCCACAATTCTTTTCCCTTTAGTCTATGATGACCGTGAAGAGATGGTCACGTGGTCCTGCGGCTACTCAAATAGGGAAACCTGCTGTCCATATGGCTACTGTCGACTTGAAAGGCAAAGCATTCGAGTAAGTGTGTACACAATCTATTAATCCCATCTTATATTCGATCGCTGTACAGTTGTTGTCATTGGTCTAAAGAAGATGCATAACCTCAGTGACAATAACAAACTTGTGTTTACAGGCTATTGAGGAACAATTCTACCAGCTTCTTAATCGACGACATCTACAGAAACCCAGGACCACTCCAATTCGAAGGAGCAGGTGCTGATTCAAAGCCTATTTCACTGTGCGTGGAAGATCAAGACTATATGGGCAGGATCAAGAAACTCCAGGAATACTTGGAGAAGGTACTTTCCATAATCCCAATAATTGATCGATCTTCGTATCGAACAATCTGAATTCCTGTGGACAAATGGCACATGTTGGTGTCTATTCTAACTGTTGTTGCTGCTCAGGTGAAAAGCATCGTGAAGCCTGGGTGCTCGCAGGATGTTCTCAAGGCAGCGCTGAGCGCTATGTCATCTGTGACCGAGACATTGGCGATCATGACATCGTCTTCCACTGGCCAGGGAACCCCACTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005740

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005740&oldid=59292"