BGIOSGA006117

From RiceWiki
Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006117| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006117, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006117

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006117, complete gene.

LocusTag

OS11G0128800

Ensembl Transcript ID

BGIOSGA006117-TA

Ensembl Protein ID

BGIOSGA006117-PA

Length

3735

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24956582..24960316

Sequence Coding Region

24960206..24960316,24959986..24960136,24959765..24959842,24959465..24959580,24959321..24959374
,24958954..24959041,24958772..24958864,24958583..24958623,24958149..24958202
,24957303..24957466,24957083..24957152,24956582..24956716

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24956582..24960316 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24956582..24960316 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCCGGTGAGGTCGGTCCTCCCCGTCGTCCTCCTCGGCTGCGGCGGCGTCGGCCGCCACCTTCTCCGCCACATCGTCTCCTGCCGCCCGCTCCACGCCAACCAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCCTATCTTCCCTGCTCGCTCGAGGGCAATGTCAGCTATTCAACAACACTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTAGGGAAAACAACTGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGCCGTGGATTGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACATGTGCTTATGAGGATTTCGAAAAGTTGGTCTCCAACTTCCGTCGCATAAGATTTGAATCTACTGTTGGAGCCGGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGATCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTTGAGAGTTTATACCCCAGTGAATTAGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTCAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAPVRSVLPVVLLGCGGVGRHLLRHIVSCRPLHANQGVAIRVLGVADSSSLLVADDLHSNGFDDALLADLCAAKSAGSPLSSLLARGQCQLFNNTEARRKVIDTASVLGKTTGLVLVDCSATYDTVGMLKDAVDCGCCVVLANKKPLTCAYEDFEKLVSNFRRIRFESTVGAGLPVIASVTRIIASGDPVSRIVGSLSGTLGYVMSELEDGKKFSEVVKTAKSLGYTEPDPRDDLSGMDVARKALILARLLGQQISMENINVESLYPSELGPDAMSTKDFLESGLVQLDKSIQERVKAASLKGNVLRYVCKIESTGCQVGLEELPKNSALGRLRGSDNVVEIYSRCYESAPLVIQGAGAGNDTTAAGVLADILDLQDLFHKTA</aaseq>

Gene Sequence

<dnaseqindica>1..111#181..331#475..552#737..852#943..996#1276..1363#1453..1545#1694..1734#2115..2168#2851..3014#3165..3234#3601..3735#ATGGCGGCGCCGGTGAGGTCGGTCCTCCCCGTCGTCCTCCTCGGCTGCGGCGGCGTCGGCCGCCACCTTCTCCGCCACATCGTCTCCTGCCGCCCGCTCCACGCCAACCAGGTACCTCGTCTCGTCTGACCCGTCCCCTTCCTCTCCGATTCGGTGCTCTCATCGCCCATACTTGTATAGGGCGTCGCCATCCGGGTGCTCGGCGTCGCCGACAGCTCCTCTCTGCTCGTCGCCGACGACCTCCACTCCAACGGCTTCGACGACGCGCTCCTCGCTGATCTCTGCGCCGCCAAGTCCGCCGGCTCGCCCCTATCTTCCCTGCTCGCTCGAGGTATCCCCATTCTATTTCGTTATTCCTTTTTTCTTTTTTTAGAATATTCCATAGCTTCCTTGGGTAATGAATACTTTGTCATGAATTTGCATTTGTACACGTGATATTTAAAGTAATGGATGGTTGGATTGTGCAATTTTCAGGGCAATGTCAGCTATTCAACAACACTGAGGCTAGGAGGAAAGTCATTGACACTGCCAGCGTTCTAGGGAAAACAACTGGTCTGTGATCCTTCTCCCTATGCAGAATACATTGCGCGCTAAGTTTTTGAATTCTCTGGAATAGAAACCAGTGGGGAAAAAAAAGGAATCTTTGATATGCTGTATGATTGTTGATTAGTTCCTTTTTTTTAAAAAAAGGAGTGTAATATCTTCTTTGGTTCTTATCTTATGATCCTTTTTGCAGGTCTTGTACTAGTTGATTGTTCTGCAACTTATGATACTGTTGGCATGCTAAAGGATGCCGTGGATTGTGGATGTTGTGTTGTATTGGCAAACAAGAAACCGCTTACATGTGCTTATGTAATGTCCTCCTTAAGTCTTCCATCCAGTATTTTTTGTCATTTTGACACATAAGTTCATGCTTACCAAATGTGTTCCTTTTTCATGCAGGAGGATTTCGAAAAGTTGGTCTCCAACTTCCGTCGCATAAGATTTGAATCTACTGTATGCATACGCCACTAGTAATTCCTTCATTTCACTATTAAATGTTATTATACTTTTCCCCCAATCTTAATGAAATTTGGTCGGCGTTTCTTTCGCCGACCCAGCAAAAAATGTTATTATATTTATTTTTCATGGAAATCCATTCATTTATTTGATCTGGGGTTGTATGATATGACTCTGGCCATATGATTAAGCACAGCCTTTTTTTTTTTGGCAATTTCTTTTATTATTACAAATGAGTTGAGGGTCTCTGCTGATATTTACTATTCCTACTCTTAGGTTGGAGCCGGTCTGCCTGTAATAGCTTCTGTGACTCGTATTATTGCCTCTGGAGATCCAGTTTCTCGTATTGTTGGCAGTCTGAGTGGTACACAGTTATTATTTTATTTGTTTGTAAAAGGTGTCTGTTTTCCAAATAGCAGAGCAATGTACACTTCCATTCCTATGATTCTGCAGGTACACTTGGTTATGTGATGAGTGAGCTGGAGGATGGAAAGAAATTTAGTGAAGTTGTGAAAACTGCCAAGTCTCTTGGCTATACAGAACCAGGTCTAAAAATTTATTCATTCATTGGACATTATAACATCAATGTGTACTCAGTATTCAATTCCTTATCTGTAATTACAGATTTCATATTTACCGAAAGTCTACTGATGCTTGTGATAAGTGCACTTACTCAGTTGTTCAATTTTGGTAGATCCACGTGATGATCTCAGTGGGATGGACGTAGCTAGAAAGGTTAATTTTTCATCTGATGAATTACATGCTACTCTACATAATTCACTTTATATGTGCCTTTGTTAACCATTGCCACAATTTTTTTCTACTCCTAAGTCCATGAACTAATATATCATGAGCTGCTGCTGTGTATCTGTTTTTTGTTTAATTGTGTCATACCATGATTTGATCCAAAATATATTCACTAGCACATCAATATCATAAATACTAAAGTTCAGGAAGGCCTATATCATGCACTTATCCTATTTGGAATTTCAATAATAATCTTGCATAGACATTGACATAAGGGAGGTTTATGTTCAGGTTCAGATGTTTTATTTGATTATTTCATTCTTTGTCAATTAGATGATGAGGTCTAACAAGTTCATCTTGGAATGCAGGCATTGATCTTAGCTAGGCTTCTGGGGCAACAGATTAGCATGGAGAATATTAATGTATGCATATAATTAATCTTGATGGTATTTGCACTCTAATGTTTTGTGTAAACATAGGTTGGTGTGCATGGGCTGATGTTTTCGCTAATATAACTGAGGGTCTGAGGCTTGTAGCAAGTGTTTTCCTGTTATTCTGGCTGTTCAAAAAAACCTAGTTGGTTTAAAATGATGCATTTCTTGTTGATACCATTCTTGGTGATAGTTTGCCCGAAGCATTACTTGGAACCATCTTTTTCTCTTTAGTTCTACTTCTATAATATTTTGGCAACATGGATTCTATGGATAAGGACCGACACTCTTCTACAATATAGGTCACTGGATATCACCATAGACTTGTGTTCAGGATTATTGGGGATTCCGATGAATTATACACCTTATGTATCTTATAGTCTGAAAATGAAATGAATACCCTCCAAATCTTGGAAGTTGTTATTTAGTTTATGTAGCCATTAGCTTTGTTGAGTGGCTGCTAGTTCAGTTGTTTTCTATGATACCAGAACTTTGATTTTGAAAGATTTTAACCCCTAAATCACTTATTCCGAAATTTTCTAATTATGCATAGACACTATATTTATGCATGTGTTATGTCGTACATTCCAGTTAGAAGACCGCTTGTAATTGAGCAGGCACCCTGTTCGTAGAAAAAAGATCAGGTGTGCTAATTTTTTGCAATTATCTTCAGGTTGAGAGTTTATACCCCAGTGAATTAGGACCTGATGCAATGTCCACAAAGGACTTCCTTGAAAGTGGTTTAGTACAGCTTGATAAAAGCATTCAAGAAAGAGTAAAGGCAGCATCTTTGAAAGGAAATGTTCTTCGCTATGTCTGTAAGATTGAAAGCACAGGGTATGTATCCTTTTATTGTGCTATGCCCTCTGAATCACTAATCAGTGTTTCGATACTAGCATACTATTGTCAGAGACACGTAGGCCCATTTCTGTGCATTTTGTAAAGGTTCTTTCAATGGTAGTGTAGAGTAACATCCCCATTTTGTAGGTGCCAAGTGGGCCTTGAAGAACTCCCGAAAAACTCTGCACTGGGAAGGTTGAGAGGAAGTGACAATGTGGTATGCTAATCCTTTTTATTTTCCTCTCTCTTTTTCTCTTTTATTCAACATCAAACGGCACTGTGCAGTTGGTAGCCTCAAGGGCTGGTTATTTTCAGGTGAAAACAAAAGAGCCTACGAGTGTGAGCAGGGTCTGTATTGGCACCATTCCCCATTTCTTCTTTGCGTTGTTCACACGAGCTTGGAAGTTGGAACACTAAAACTACCAAAAACATTGTTTGTGTTGGCCTCTAACACGTTAGAAGTAGATTGATGAAATCCATTTTTCTGTTTTGAGAGGATTAAAGAATGTTTGATATGTGATTTTTTACTGTTGGTAGAGAGTGATGTGAAACGTAAAAGTGACGCTGCTTTGTTCTTGGGCAGGTGGAGATATACAGCAGATGCTACGAGAGCGCCCCTCTGGTGATTCAGGGCGCTGGAGCTGGCAATGATACCACTGCAGCTGGAGTTCTTGCTGACATACTTGATCTCCAGGATCTCTTCCACAAAACGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006117