BGIOSGA006189

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Revision as of 02:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006189| Description = Nucleosome chromatin assembly protein| Definition = Oryza sativa Indica Group BGIOSGA006189, complete gene.| tag = B1...")
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Gene Name

BGIOSGA006189

Description

Nucleosome chromatin assembly protein

Definition

Oryza sativa Indica Group BGIOSGA006189, complete gene.

LocusTag

B1342F01.10

Ensembl Transcript ID

BGIOSGA006189-TA

Ensembl Protein ID

BGIOSGA006189-PA

Length

3888

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23899841..23903728

Sequence Coding Region

23903591..23903728,23902376..23902498,23902226..23902276,23902015..23902086,23901824..23901937
,23901686..23901744,23900436..23900496,23900281..23900337,23900165..23900200
,23899841..23899888

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23899841..23903728 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23899841..23903728 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGCGCCGGCGGACAAGGGGAAGAAGGCCAAGACCGACGCCGACGGCGGCGCCGCCGAGGAGAACGAGCAGATCGACGGCGCCCTCGTCCTCTCCATCGAGAAGCTCCAGGAGATCCAGGACGAGCTCGAGAAGGTCAATGAGGAAGCTAGTGACAAGGTTTTGGAGGTCGAGCAGAAATACAGTGAGATTCGCAGACCTGTCTATCTCCGAAGGAGTGACATTATCCAAACAATCCCTGACTTCTGGCTGACAGCGTTTCTGAGTCATCCTCTACTTAGTGAGCTTTTGACCGAAGAGGATCAAAAGATGTTCAAGTACCTGGAGTCTGTCGATGTGGATGATTCTAAAGATGTCAAGTCAGGCTACTCCATAACTCTTACCTTCTCCGAGAACCCGTACTTTGAAGACAAAGAGCTCACGAAGACATATGCCTTCGCTGATGACGGAACAACCACAATAAATGCTACTTGCATTAAGTGGAAGGAAGGAATGGAAATTGCAAATGGGAATGCCAAGAAGAAAGGGAGCAAGCGACCATTGGTTGAGGAAAGTTTCTTCACCTGGTTTACTGATACAGAGCACAAGAGTCTTGCTGATGGTGTGCAAGATGAGGTGGCTGAGATCATCAAGGAAGACCTGTGGCCCAATCCATTGAAGTATTTCAATAATGAGGCTGAAGAGTTAGGAGAGGATGACGACGAAGAGGGGTCTGATGCTGATGAGGGTGAAGAGGATGAGGAGGAGGAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MTAPADKGKKAKTDADGGAAEENEQIDGALVLSIEKLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRSDIIQTIPDFWLTAFLSHPLLSELLTEEDQKMFKYLESVDVDDSKDVKSGYSITLTFSENPYFEDKELTKTYAFADDGTTTINATCIKWKEGMEIANGNAKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYFNNEAEELGEDDDEEGSDADEGEEDEEEEN</aaseq>

Gene Sequence

<dnaseqindica>1..138#1231..1353#1453..1503#1643..1714#1792..1905#1985..2043#3233..3293#3392..3448#3529..3564#3841..3888#ATGACGGCGCCGGCGGACAAGGGGAAGAAGGCCAAGACCGACGCCGACGGCGGCGCCGCCGAGGAGAACGAGCAGATCGACGGCGCCCTCGTCCTCTCCATCGAGAAGCTCCAGGAGATCCAGGACGAGCTCGAGAAGGTGAGCCACCGCCCCCTCCTTCGCGTTTAGGAGCTAATCTTTTTTTTTTTTTTGGGTGACATGGATGTGTCCTGTGGATTAGGCTGCGGGCGGGATGCGAAGGGGGGGTTTGGGAACCTGGGGCCGTGTCGAATTCGGGTGGAATTTAGCCTTTGGGGGTCTGTGATTGTGGTTGGGTGGAATTCTTCGCTTTCGCTACCGACCGTGGTGTTGCGGAGGGTGCGGAACATTGGGGTATTAGGGCTGACAGAAAAAGGTTTGGGTGTTTGGCGAAAGGCGAATTCTGCTAGGAAGTTACAGGGATTGGGGTCGAAATTTAAGTGGTAGCATTAGAACACGATTTTGTGTTAATAGTGTTATTTTAGAGATATGCATGAAAGCTCTGCACGCAATCAATTTTACTAAGTAATGTAGAGTATCATGAGAACTTTGCATTGGTAAGTACACTGTGCTGTAGTATACTTGTAGAAGGTGTTATCATCAATACATGGGAGCAAATATTTTTAGATGGTCTCATACCGAATAAGATAGTGTGGTGCTATCATCAATACATGGGAGCAAATATTTTTAGATGGTCTCATACCGGATAAGATAGTGTTTTATATGTTGGCAACATGCTCCTAAGAGACAATATGCATATATATTTTTTTTTGTCGAATAGCGCCCGTCTTGTTTGACATCATAAAAACCCAACTTTTGGTTCCTTGTCCTACTTGTCGATTGCCATACCCTCGGATAGCACCGAGCTTGTTGATTAGTTCACAATCTGAATTGTTGGACAGCTCAATAGTATCAAGTTTGTAGTCATGTAGCTCACTACAGCTTCACCATTGAATCAGAATTATTTTGAATCCTGAGGGGTTTTATAGTTAGCACTGTATAATGTCCCAAACTGACCTTTTTTTTTTTGGTTACCGCCACCTAATATGGAGCTTCCGTGTATTTGTGTCTATTTGCCGTATCCTTTTCTCCTTTGTATTGTTGTCTAAGTTTAGTGACTGTCCATTCATTCTTGTGGCGTGTTGGCTGTCTAGAATATAGGAAGAGAAGATAGCGCGGTATGCTTATGTTAGTTTTATGTATTGTTTACAGGTCAATGAGGAAGCTAGTGACAAGGTTTTGGAGGTCGAGCAGAAATACAGTGAGATTCGCAGACCTGTCTATCTCCGAAGGAGTGACATTATCCAAACAATCCCTGACTTCTGGCTGACAGCGGTTTGTGAACACCTCATTCCATAATAACGGGCCCCCCCTGTTTTTTTGAAACCTAACATTCTTATAATCTTACCTATTTTTGTTATGTGCTGATTACAGTTTCTGAGTCATCCTCTACTTAGTGAGCTTTTGACCGAAGAGGATCAAAAGGTACCTTTGTTCTTTGTTGTTAATAAAATTAACTTTAGTATACTTGTACGTTTGTATGACCACAGAATGCAATTGGACAATACTTGCACATTTTTTAGATGCATTTAACTTATAAGTTTTTCTTTTGCCTTAATCGCAGATGTTCAAGTACCTGGAGTCTGTCGATGTGGATGATTCTAAAGATGTCAAGTCAGGCTACTCCATAACTCTTGTAAGTATCATTGCACACATGTATAGTTTTATGTTTCATGTTTTAGTTGTGCTTATGAATGTAATATGAACTGGCAGACCTTCTCCGAGAACCCGTACTTTGAAGACAAAGAGCTCACGAAGACATATGCCTTCGCTGATGACGGAACAACCACAATAAATGCTACTTGCATTAAGTGGAAGGAAGGAATGGTATTGTGCTCTTTTAAAAGCTGCTTCTAAGTGCTTGTATAGAAACGGCAAATCTAATATCTTTAATAATAATATACAGGAAATTGCAAATGGGAATGCCAAGAAGAAAGGGAGCAAGCGACCATTGGTTGAGGAAAGGTGAGTTTCTTCTGCCCATCTCTTGCCTCCAGCAGTATCATGTCTAATTGTTCCTCCAGTAATTCAAAACAATTTCTTGTCTTCACTTTACTTATTTCCAACTACATGCTGATGTTGAAGTATTTGATGCTTGTTTCCTATTTTGTAGTTAGTAGCTCTGCCATTATTCTGTTGGGTGGTTGTTTCAGGGTTAAAATAACTGTAAACGATTAGTGCTTTTACTTCCATATAGCTATTACTATATAAACAATTAAAAACACAGTTATATTGTGTGCATCCTCTAGTAATTTGTGAAAAGATAAAGGGACTCTTTGAGCAGCGTTCTCTGCTACTGAACTCTTTCGCATTTGCTCAAGATTTGCACCAACCTTTCCAAAGGTGTCATATCACTTAAGCGGGTGTTGATGCTTCAATTATACATGGTTACAAAATTGGGTTGGCATGATAACTATTAGAAGACTCTGCACTTCTGGATTTTGTATTCTGTTCTTCAAACTGTTTATTACTGCATGCTTATATTTATCTTTTAGTTAGTACAATTTTTCTTGTTGATTCACACTTAGTGCCCTGTTTCTGCGATTCTGTTATGATCCAAAATAATGTCGTGTAGATTACTTGTCACAGCATCACTATTGCTATAGGGATCAGAATTTAGTTTCTCTTTACATATTTCCTCTTAAGTTAATTGCTGTTCTTTGGATTTCCTTTAATTATTAGTTTTTATCCTTTGGGATCTACCGCTTCTATATATGGAGGCCATTGTTACCATTATTGTTAAGAAAGATCAATCTAGCTGCCCGCCTGACCATCTTCCTGGCTGTGTTTTCACCCTATTATCTAGGTTGATAACAATTCACTTGAAACATTGCTTATTCCTAGTACGAGCAAACTTCATTGTGGGCAATGATACCTTTCAAGATATCACATTATTATTCATTCAGCTTTGTTAATGATGGATTGCAGAGACTATGTTCTCGACAAGTACTTTCTGATATTCTTATTTTTCCTATGTAATATATGACTTTTTTGGCATTAATTTTAAATCTTGTCCTGTGGTCATGGGTGGTGCCCTGCCAAAACAACGTTTTCTGTTGGACTCCTTGTTGCATGCTTGATGTATTTTTTTATATATACAAAATCGTAAATCAGAAAAAATATGTGAAAATCTTCTCTTCTGCCTTTCTTGCAGTTTCTTCACCTGGTTTACTGATACAGAGCACAAGAGTCTTGCTGATGGTGTGCAAGATGAGGTAACCAATTTGTGTCTAACCTGTCCTTCTGTTAAGAAAAAGCTTTCTTGATGTTCTTTTATTCCTCGAGCATGTTTTCTTAGCTTTTAATCTTGCAGGTGGCTGAGATCATCAAGGAAGACCTGTGGCCCAATCCATTGAAGTATTTCAATAATGTTGGTGACTGTTTTTTATGAATCATTTTATTTCATATCCTGTGTTTGGGGCTTTGGACCTTATAGATCTGTCATTGCAGGAGGCTGAAGAGTTAGGAGAGGATGACGACGAAGAGGTAATAATTTCTTAATGCAACATGATGGTGTTCTTATGATTCTAGGAAAGAGAGAATCATATGCTTGGCTTAATTTGGGTACACATGTTGTAGCACTACATTTCCATGCAAAAATCTAAATACTGGCTACTAGAGTAGCAATTAACTAGTCACATGCAAGACCATTTTGTACTTTGAATTGAAAGCAGGAATGCAAGTGCTTTTTTTTTTTGTTCTTTTTATCTGCTTCACCTTCGATGTTGACTTATTTCTACCTTTTTACCTGGTTGTTTGCAGGGGTCTGATGCTGATGAGGGTGAAGAGGATGAGGAGGAGGAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006189