BGIOSGA006239

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Revision as of 02:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006239| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006239, complete gene.| tag = OsI_076...")
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Gene Name

BGIOSGA006239

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006239, complete gene.

LocusTag

OsI_07693

Ensembl Transcript ID

BGIOSGA006239-TA

Ensembl Protein ID

BGIOSGA006239-PA

Length

2624

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23084780..23087403

Sequence Coding Region

23087298..23087403,23087106..23087162,23086500..23086585,23086347..23086418,23085953..23086006
,23085632..23085707,23085349..23085410,23084969..23085028,23084780..23084884

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23084780..23087403 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23084780..23087403 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGCGGCGGGGGCGGCGGTGGCGCCGGCGAAGCTGGGTCTGTACTCGTACTGGCGGAGCTCGTGCTCGCACCGCGTCCGCATCGCCCTCAACCTCAAAGGATTGGAGTACGAGTACAAGGCGGTGAACCTGCTCAAGGGGGAGCACTCTGATCCAGAATTCATGAAGGTTAATCCTATGAAGTTCGTCCCGGCATTGGTCGATGGAGATGCTGTAATTGGTGATTCTTACGCGATAGCATTATATTTGGAGGACAAGTACCCTGAGCACCCTCTTTTACCTCAAGACCTTAAAATGAAGGCCTTGAATCTCCAGATAGCAAGCATTGTATGCTCTGGAATTCAACCTCTTCACAATCTTACCGTACTGAGGTTCATTGAGAAGAAGGTTGGTACAGGGGAGAGCATCCCATGGACTCAACAACAGATCGACAGAGGTTTCGCAGCTGCTGAGAACCTAGTAAAAGGCTGTGCTGGGAAGTATGCAACAGGAGATGAAGTCCGATTGGCAGACGTATTCCTCGCACCTCAGATTTATGCAGCAGTGACTCGTTTTCAAATTAACATGTTAAATTATCCCACTCTCGCGAGGCTCCATGAGGAGTATATGAAACATCCAGCATTTCAAGCAGCACTCCCAGACAGACAACCAGATGCCCCTTCCTCTACCTAG</cdnaseq>

Protein Sequence

<aaseq>MAEAAGAAVAPAKLGLYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPEHPLLPQDLKMKALNLQIASIVCSGIQPLHNLTVLRFIEKKVGTGESIPWTQQQIDRGFAAAENLVKGCAGKYATGDEVRLADVFLAPQIYAAVTRFQINMLNYPTLARLHEEYMKHPAFQAALPDRQPDAPSST</aaseq>

Gene Sequence

<dnaseqindica>1..106#242..298#819..904#986..1057#1398..1451#1697..1772#1994..2055#2376..2435#2520..2624#ATGGCGGAGGCGGCGGGGGCGGCGGTGGCGCCGGCGAAGCTGGGTCTGTACTCGTACTGGCGGAGCTCGTGCTCGCACCGCGTCCGCATCGCCCTCAACCTCAAAGGTACGTTGTGCCCGCGCCGCGCGATTGCCTTCCTCTCGTCGTCATCTTCTATGCGTGGTTGGCTCATGGCCGGGCAGAGTGAGTGAACCTGGTGCGTGCGTGCGTGCGGGTGATTTTGATGTCTGTCTCCTGCAGGATTGGAGTACGAGTACAAGGCGGTGAACCTGCTCAAGGGGGAGCACTCTGATCCAGGTTAGGTGCTACGCCACCTGTCTGTCAAACTGCTTTCCTCCCCCTATCTATACTTGTGTACGGTTTTTTGCTGCGTCTAGAGACTGTTCGTGCAATTACCGCCGCAAATTTGTGCTTGGATGTTGAGAGGTAAGATTCTAGCAGGCGATCGGCCCGAAATCCACAAGGCTAGGCTCTGTGGGGGAAGATGAATAGGAAGGTGTTCGATGAAATGCACAACTGAGAAAATTGAGATGAACATGAGAGGTTTCGGTGCAGCATGTGGAAGCGCCTCTTTTCGGGATTTTCTTGATGCAATATAAAGCAAAGTGATATATGCAGATCATGGCCTTAGTACCCTTGTAACTGGACGCATGATACGCACACGATGCGCCATGATGTCCACCCGTTCGTGGCACGCACCCATGCACAACTAGCTCAGAATCGTAGGGGAGGAACCAAAAAACAGGAAACTCAAACCGAAAGATAGAACACATGTGTGGTAGCCTCAACTATTTTCTTTTTTGTTTGTGGGTGGAAGAATTCATGAAGGTTAATCCTATGAAGTTCGTCCCGGCATTGGTCGATGGAGATGCTGTAATTGGTGATTCTTACGCGATAGCATTAGTAAGCATTCAGAATTTTGAGATGCAGTAGTTTATAGCATCAAAATTGGCCGCTTCTTGACTTGTTTCTATGTGATTGCAGTATTTGGAGGACAAGTACCCTGAGCACCCTCTTTTACCTCAAGACCTTAAAATGAAGGCCTTGAATCTCCAGGTAATGATAGATTCTGCACTGCTATGCGCAGGATGATGACCTCAATTAAACATTCCATTTGATATACAAGTGCTATTTGTAATTTGTTGAGGTTGAGCAGCGTTGATGTTCAGTTAGTGCCTATTTGAGAAGGTAAGATCACATCAGAACAATAACAAAAAGAGGAAAGGATCAGCCCACACATTTTTCAGGATAATAGGAATACTGAGCACAAGGATATAAGATAGGCTTAGGCATAATCCAGAAAATATAGCTTACTGTATGCACTAGATTTTTTTTCCTCTTACCGATTGATCATGCCTAGTGTGACCTTTCATGACATAATCTAATTTTATGGCAGATAGCAAGCATTGTATGCTCTGGAATTCAACCTCTTCACAATCTTACCGTACTGGTAAGAACTGATTTGCATTCAATTTCTTACTGCCATGTAAGGTTCTCTGCCTGGTATTTGATTACTCAGTGCACCTGTGTTCCATGTCTATCTGGCTGCATTGTGCAAAGATGCATTTTTGTGCCTCAGATTAACTCTATATTAAACAGTTTGTGCTTCTGTAGTAAAATTAATATAGTACAGCTCAATTAGGGAAAAAAATATTGTATAACAGAATAATTTGCGGGCCACTTGTTTCTTTGCAGAGGTTCATTGAGAAGAAGGTTGGTACAGGGGAGAGCATCCCATGGACTCAACAACAGATCGACAGAGGTTTCGCAGGTTCTCCTCACTGACGTATCCTTTATTTTATTAATCAAATGACTATATTTTGCAGCTTTACTTCCACCATCAAATCTGCTTCAAAAAAAATGTGTTATGCATAACTCAGTTGTTTTGCATGTTGTGAGAAGCTCACTCATATTCCTCCCCTTTTCACATTCCTGCCTATTTAGATTTGCTTTTATGTCACACCATGCTCACTTCGTTCCCCAATGGTGTAGCTGCTGAGAACCTAGTAAAAGGCTGTGCTGGGAAGTATGCAACAGGAGATGAAGTCCGATTGGTGTGTATGCTGCCCTAACAATTTTATCCTTTCTTGTATGGAGATCTTCTCTAAGGTTTTTTTTTTTTTTTCGTGTATCTTGCTTGCAAATTGTGTCACTTTTTCCCTAAAACAGAGTGAAGTTCTCCCATGTGAAAAAAGAAAAAACTGAAGTGATAAAATAAAAATGCATCCTCATATTCACTGTACTCCTCATGAGAACCATAGATTGCCATTTACTAACTTTCCCTTTGTTTATGTAATCATGTTTGTGAACACTCCAAATATTAACAAGCACTGTTTTGGCTTCAGTAACTGTTGCATTTCCGTTACACATGCAGGCAGACGTATTCCTCGCACCTCAGATTTATGCAGCAGTGACTCGTTTTCAAATTAACATGGTACTGTTCTTGTGCTTCTTACTCTATCCATGCATATGCCTTTATCTATTTTGTTAAATCTAATGAAATATGTTTTCTTGGCAGTTAAATTATCCCACTCTCGCGAGGCTCCATGAGGAGTATATGAAACATCCAGCATTTCAAGCAGCACTCCCAGACAGACAACCAGATGCCCCTTCCTCTACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006239