BGIOSGA006298

From RiceWiki
Revision as of 02:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006298| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006298, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006298

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006298, complete gene.

LocusTag

OSJNBA0014M17.32

Ensembl Transcript ID

BGIOSGA006298-TA

Ensembl Protein ID

BGIOSGA006298-PA

Length

3435

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21690044..21693478

Sequence Coding Region

21692420..21693478,21692213..21692303,21691744..21691901,21691583..21691634,21691366..21691457
,21691151..21691244,21690044..21690513

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21690044..21693478 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21690044..21693478 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAAGATCAGACTATTCCGATGATGGAGAAGACGACGTCTTCTTCGACGCGTTTGACGATGACGACGACGACGGCGACGATAACAACAGAAGCTCAACGGAGATTAGTACAAGTGAAGCTGGGTACGAGCTGTGGGCAGGTGAGCCGATGAGTATCAGAGAAAGGAGACACAGATTCCTGAAAGGAATGGGGTTTCTTGAGCCCGGTCCTACCGGGACGGCCTTCCCCCAGTGGCTGGCAGAAATCGCAACAACGGATTGCTGCTCATTTCACGATTTCGAGGAGAGGATCAGTAGCATCTGCTCTTCCTTCCGTTCTTGCTTCTCTGACAGTATTTTGGCAGCAACAGACAATACTAATGATAGTGCTGATAACTGCACAAGGGATGTGGATTATAACAGTAGTGGAAGGAGAAGCACAACATCTCATGATCAAGGCCAGCACGATGTCCTCTCGGAGATTGTTGAGGAGGCTGGAACATCATCTGATGAAATGGTGACTCCAAATGCGCCTGAGATTGTGCCTGGATTCTCTAAACTAATGCGAAAACTACTGCGCATTCGCTTCGGTCACGGCCCTAAGAGAAACGAATTCAAGAGCTTGTGGGAAATCTTCATGAGGAAGAAGGTTTCAGATAGAGTACTTTCCATGGATGATGTACATGTCCAACCAAGAGGATTGAACTCAGGCACATTGTACAGGACAAAAGTTCATCAGCAGAACAAGAAGTGGATGGACTTCACTGCCGTCTACATGTGCCAGGAGATCCAGGCACACGAGGGATTGATCAGGGTGATGAAGTTCAGTTCATCCGGGTGGCATCTAGCCAGTGGCGGCGAGGATTGCGTCGTGCGCGTTTGGCAGATCACAGAGGTTGAATCTTCGCCTGATTTGTACGGCAGAGATGTTCCTGAAGACATGAACAAGAAGAAGGACGTGAAAATTAAGCCCCTCGCGATCATACCAAAGAAGGTTTTCAGTATCACAGAGACACCTCTGCATGAGTTTCAAGGCCATACAAGTGATGTCCTGGATTTGGCATGGTCAAAGTCAGATTTTCTCTTGAGTTCATCGAAAGACACGACAATACGCATGTGGAAAGTTGGCTGTTATGACTGCCTTGCAGTATTCAGACATGGAGATTATGTTACATGTGTTCAATTCAATCCAGTTGATGAAAGGTACTTCATCAGTGGCTCAATAGATGGCAAAGTTCGTGTTTGGGATGTTTCAGACAAGCGAGTAGTTGATTGGGATGACACAAAATACATCATAACAGCTATAAGTCACCGACCAGATGGAAAGGGTTTCGTTGTCGGTTCTGTCAAAGGGAGATGCCGCTTCTATGATCAATCTGGTCTTTTCCCATTAGGTCGAAACATTGAAAGGAACAAACTGATGCGCATAAAGCGGAGACGGTGTGCTGCCAACAAGATTACCAATATTCAGTTCTCTCAGGGCCATCCATCAAGGATGATAATCACATCGAAAGATCACAAAATCCGAGTCTCTGAAGGTCATAAGATCACCCAAAAGTTTCAAGGACAATGGAGGTCCAAGGTGTTGGTGCCTCCGTCGCTGACGCCCGACGGCAGGTACCTGATATCGGCGGGGAGGGACTCCAAGATCCGCATCTGGAACTTCGACGGCGGCGGCAGGCGGCGGAGGGTGGTGAGCTCGCGCGAGCTCTTCTTCTCCGAGGGCGTCACGGCGGTGGCGCCGTGGGCGAGGGCGATGGGCGGCGGCGGCGGAGCGGACGCGCCGACGCTGTGCTACGACCGGGAGCGGTGCTCGTTCGGCACGTGGTTCGTCGTGCCCGACGGGGCGGCGGCGGCGGCGGCTACGACGTGGCCGGAGGAGAGGCTGCTGCCGTCGCTGAGGTACGTGAACTGCGCCGGGATGGACGACTGCCGGTCCCAGGTTCCGGCGGCGTGGAACATGGTGGTGGTGACCGGCAGCCGCGGCGGCGCCATCAGGGCCTTCCACAACTACGGCCTGCCGGTCAGGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MPRSDYSDDGEDDVFFDAFDDDDDDGDDNNRSSTEISTSEAGYELWAGEPMSIRERRHRFLKGMGFLEPGPTGTAFPQWLAEIATTDCCSFHDFEERISSICSSFRSCFSDSILAATDNTNDSADNCTRDVDYNSSGRRSTTSHDQGQHDVLSEIVEEAGTSSDEMVTPNAPEIVPGFSKLMRKLLRIRFGHGPKRNEFKSLWEIFMRKKVSDRVLSMDDVHVQPRGLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVRVWQITEVESSPDLYGRDVPEDMNKKKDVKIKPLAIIPKKVFSITETPLHEFQGHTSDVLDLAWSKSDFLLSSSKDTTIRMWKVGCYDCLAVFRHGDYVTCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKGRCRFYDQSGLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRVSEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDGGGRRRRVVSSRELFFSEGVTAVAPWARAMGGGGGADAPTLCYDRERCSFGTWFVVPDGAAAAAATTWPEERLLPSLRYVNCAGMDDCRSQVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL</aaseq>

Gene Sequence

<dnaseqindica>1..1059#1176..1266#1578..1735#1845..1896#2022..2113#2235..2328#2966..3435#ATGCCAAGATCAGACTATTCCGATGATGGAGAAGACGACGTCTTCTTCGACGCGTTTGACGATGACGACGACGACGGCGACGATAACAACAGAAGCTCAACGGAGATTAGTACAAGTGAAGCTGGGTACGAGCTGTGGGCAGGTGAGCCGATGAGTATCAGAGAAAGGAGACACAGATTCCTGAAAGGAATGGGGTTTCTTGAGCCCGGTCCTACCGGGACGGCCTTCCCCCAGTGGCTGGCAGAAATCGCAACAACGGATTGCTGCTCATTTCACGATTTCGAGGAGAGGATCAGTAGCATCTGCTCTTCCTTCCGTTCTTGCTTCTCTGACAGTATTTTGGCAGCAACAGACAATACTAATGATAGTGCTGATAACTGCACAAGGGATGTGGATTATAACAGTAGTGGAAGGAGAAGCACAACATCTCATGATCAAGGCCAGCACGATGTCCTCTCGGAGATTGTTGAGGAGGCTGGAACATCATCTGATGAAATGGTGACTCCAAATGCGCCTGAGATTGTGCCTGGATTCTCTAAACTAATGCGAAAACTACTGCGCATTCGCTTCGGTCACGGCCCTAAGAGAAACGAATTCAAGAGCTTGTGGGAAATCTTCATGAGGAAGAAGGTTTCAGATAGAGTACTTTCCATGGATGATGTACATGTCCAACCAAGAGGATTGAACTCAGGCACATTGTACAGGACAAAAGTTCATCAGCAGAACAAGAAGTGGATGGACTTCACTGCCGTCTACATGTGCCAGGAGATCCAGGCACACGAGGGATTGATCAGGGTGATGAAGTTCAGTTCATCCGGGTGGCATCTAGCCAGTGGCGGCGAGGATTGCGTCGTGCGCGTTTGGCAGATCACAGAGGTTGAATCTTCGCCTGATTTGTACGGCAGAGATGTTCCTGAAGACATGAACAAGAAGAAGGACGTGAAAATTAAGCCCCTCGCGATCATACCAAAGAAGGTTTTCAGTATCACAGAGACACCTCTGCATGAGTTTCAAGGCCATACAAGTGATGTCCTGGATTTGGCATGGTCAAAGTCAGATGTAAGTCTTCTGTCTCATGTAGTTTGGATATTTAAATGATTGAAGTGTATTTTTTTTGTGAGAAGTGTAATGTTAAATTTGGTATGAACTGATCTAGTAGTATATACCTCCTGCAGTTTCTCTTGAGTTCATCGAAAGACACGACAATACGCATGTGGAAAGTTGGCTGTTATGACTGCCTTGCAGTATTCAGACATGGAGATTATGGTATGTGCAAACATCCCATAGCAGTTAACTATGGTGATGCAAATATCAAACAGGCTTTGTGCTTAAGCGTTTTTATTCAAAGCTCAAATTCTGGGAACGTGTTATTTTGCTAGCATTCTTTATTTTAAACTGGAAATACTTCTTTGTAATAATGAATGGTTTAGTCCATGGCTTATGAAGAGGCCGGAATAAATATATTCCTTTTCCTAAAAAAGTTAATTGCCCACAAAATATTTTTTCCTAATTTTTCTTTCCTTATGTAGTAGATTCAACTTAATGATGTTGACCTGATATTCTTTTCTTGTCAACAGTTACATGTGTTCAATTCAATCCAGTTGATGAAAGGTACTTCATCAGTGGCTCAATAGATGGCAAAGTTCGTGTTTGGGATGTTTCAGACAAGCGAGTAGTTGATTGGGATGACACAAAATACATCATAACAGCTATAAGTCACCGACCAGATGGAAAGGTTCATGCTTTATCAAAATGCTATTTTTTTCAAAAATTGATTATCAAAATGTCATTGAATTTTATTTCCCAGTAACTAGCTGCTGATTCTTGCATTTTACCCTTGTCAGGGTTTCGTTGTCGGTTCTGTCAAAGGGAGATGCCGCTTCTATGATCAATCTGGTATATATGACTGCATTTTATTTTTATTTTTCTGATCCTTCAGATATTTCTCATTTTAAGGACAAGGAGGGAATAATGTTGTTATTAACTAAGCATTGTACATTATTATTTTTCTTTCCCAATAGGTCTTTTCCCATTAGGTCGAAACATTGAAAGGAACAAACTGATGCGCATAAAGCGGAGACGGTGTGCTGCCAACAAGATTACCAATATTCAGGTTAGTTGCTTAAATTTTTTTTTCATCCCATGCATATATATATATATATATATATAGTTTATGATTTTAGCCTGCTACACGAATACCGGCCAATTGATTATTATTGTCATCTCTCATGCAGTTCTCTCAGGGCCATCCATCAAGGATGATAATCACATCGAAAGATCACAAAATCCGAGTCTCTGAAGGTCATAAGATCACCCAAAAGTTTCAAGGTATAAAAGACTTCATTTCAGTCTCTTTCACCATTCTATTGTATGAAAACAAATCTCCTCAAAATTTCATAAGCGGTTTTCACTTGATATATATAGGCCTTGTTTGAGGGAGCTTTAAATTCTGAGAAGCAGCTGTTTGGTAGCCAGCTTATGAGAATCTGGAAAAGCTCTGAAACCCAGCTTCTCCAGCTTCTGGCTTCTTAGTTCATTTTTTAGAATCTATAACTACAGATTCTCAGAAGCTGTGGACTGTTTAGGGCAGCTTATAGCAGAAGCAGCTAGGAGAAGCTCCCCCAAACAGGGCCATAGTACTCCATCCGTTTGAGTTTCAGATTATAAGTCGTTTTGATTTTGGTCAAAGTCAAATTACTTTAAGTCTGTCCTAGTTTAGAGACAAATATAATAATAATAATATTTACAACACCAAATTAGTTTCACTAAATCTATAATTGAATATATTTTCATAATATATTTTTACGTTTGGTTGAAAGTATTACTATTTTTTCTACAAACTTAATCAAACTTGGGGCAGTTTAACCTTGAGTAAAATCAAAGTGACTTATAATCTAGAACAGGGAGAGTATATGTCATCATGTTTTGGAATATTCAAAAAATCAAGCATTTATTATATTTCCAGGACAATGGAGGTCCAAGGTGTTGGTGCCTCCGTCGCTGACGCCCGACGGCAGGTACCTGATATCGGCGGGGAGGGACTCCAAGATCCGCATCTGGAACTTCGACGGCGGCGGCAGGCGGCGGAGGGTGGTGAGCTCGCGCGAGCTCTTCTTCTCCGAGGGCGTCACGGCGGTGGCGCCGTGGGCGAGGGCGATGGGCGGCGGCGGCGGAGCGGACGCGCCGACGCTGTGCTACGACCGGGAGCGGTGCTCGTTCGGCACGTGGTTCGTCGTGCCCGACGGGGCGGCGGCGGCGGCGGCTACGACGTGGCCGGAGGAGAGGCTGCTGCCGTCGCTGAGGTACGTGAACTGCGCCGGGATGGACGACTGCCGGTCCCAGGTTCCGGCGGCGTGGAACATGGTGGTGGTGACCGGCAGCCGCGGCGGCGCCATCAGGGCCTTCCACAACTACGGCCTGCCGGTCAGGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006298