BGIOSGA006302

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Revision as of 02:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006302| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006302, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006302

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006302, complete gene.

LocusTag

OSJNBA0014M17.10

Ensembl Transcript ID

BGIOSGA006302-TA

Ensembl Protein ID

BGIOSGA006302-PA

Length

3693

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21588903..21592595

Sequence Coding Region

21592272..21592595,21591983..21592129,21591722..21591869,21591356..21591609,21590403..21590780
,21589715..21590023,21589447..21589647,21588903..21589166

Genome Context

<gbrowseImage1> name=IndicaChromosome02:21588903..21592595 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:21588903..21592595 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCCGTCTCCGCGCCCCTTCTCCGGCTCCACCACCACCACCGCTGCCTCCTCCGCCACTCCTCCTCGCCGCGCCGCTACCCAGCCGGCTTCTCGCGTGGGCTCAGCTCCGTCTCGTTCGGCCTCCCGCGCAGCACCAGCACCGCCGCGCGCTCCACCGCCTCGCCCTCGGCGCCGTCGGCGGCGGCGGCCGAGGCCACGGATGCGGCTTCCGCCCAGGCGGGATCCGACGGCAAGGGGGATGGGATTGGGGAGGAGGAGCGCGTCGTGCTCCCCACCAACGAGTCCTCCGACCGCCTGCTCCGCATCCGCCACACCTGTGCGCATGTGATGGCCATGGCCGTCCAGAAGCTGTTCCCCAACTCCAAGGTGACAATAGGTCCCTGGATAGACAACGGATTCTACTACGACTTCGACATGGAGCCCCTCACGGACAAGGACCTCAAGAGGATCAAGAAAGAGATGGATCGGATCATCCGGAAGAATCTCCCATTGGTGAGGGAGGAGGTGTCCAGGGAAGAGGCCCAAAAGAGGATTGAAGCGCTTAATGAGCCATATAAGTTGGAAATTTTGGAGGGCATCAAGGAAGAACCTATCACAATCTATCACATTGGAGAAGAGTGGTGGGATCTCTGTGCCGGACCTCATGTCGAGTCTACTGGCAAAATCGATAGAAGAGCTGTTGAGCTTGAGTCTGTTGCTGGTGCTTACTGGAGAGGTGACGAAAGTAATCAAATGCTACAAAGAATATACGGGACTGCATGGGAGACTGAAGACCAATTGAAGGCTTACATCCACTTCAAGGAAGAGGCCAAGCGCCGTGATCATCGGCGATTAGGTCTGGATCTTGATCTATTCTCCATACAGGAAGATGCTGGTGGCGGTTTAGTATTCTGGCATCCAAAAGGTGCTATTATCAGACATGTTTTAGAAGACTCATGGAAACAGATTCACTTGCAACGTGGTTATGATCTATTATACACTCCCCACGTTGCAAAGGCTGAACTTTGGAAGGTTAGTGGGCATATCGATTTCTACAAAGAGAACATGTACAATCAAATGGATGTTGAAGATGAGCTATATCAACTTCGGCCCATGAATTGCCCTTACCACATTTTAGTATACAAGAGAAAGCTACATTCATACAGGGATTTTCCCATTCGAGTGGCAGAGCTTGGAACTGTCTACAGATATGAACTATCTGGTAGTTTGCATGGGCTGTTCCGTGTCAGAGGATTTACGCAGGATGATGCCCACATATTTTGTCTGGAGGACCAGATAAAAGATGAAATTAGAGGTGTTCTTGATCTGACTGAGCAAATACTGGGCCAATTTGGCTTTCGGTATTATGAGATAAACCTTTCAACAAGGCCAGAAAAATCTGTTGGCAGTGATGACATATGGGAAAAAGCAACACTTGCACTAAAAGATGCACTAGAAGACAAAGGTTGGGAGTACAAGGTTGATGAAGGTGGAGGCGCTTTCTATGGCCCAAAAATTGATTTGAAAATTGAGGATGCTCTTGGAAGAAAATGGCAATGTTCCACTGTGCAGGTCGATTTCAATTTACCTGAGCGGTTTGACATTACTTATGTCAATTCAAATAGCGAGAAGAAACGGCCTATCATGATTCATAGAGCTATCCTTGGGTCTTTGGAACGATTTTTTGGTGTCCTCATTGAACACTATGCTGGTGATTTTCCACTTTGGCTTGCACCAATCCAAGCTCGTATTCTACCTGTGACAGACAATGAGCTGCAATACTGTAACGAGGTGGCTTCAGAACTGAAATCAAAAGGCATTCGAGCTGAGGTATGTCATGGCGAGCGTCTACCAAAGCTAATACGGAATGCCGAAACGAAGAAAGTGCCGCTCATGGCGGTCGTTGGGCCTAAAGAAGTTCAAGCCAGGACCCTCACTATCAGGTCCAGGCATAGTGGGGAGATTGGTACTATGCCTGTGGATGAATTCTTTCGCAGAATGCAACTTGCTATTGCGAACAAATCTTCTTCACTATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAVSAPLLRLHHHHRCLLRHSSSPRRYPAGFSRGLSSVSFGLPRSTSTAARSTASPSAPSAAAAEATDAASAQAGSDGKGDGIGEEERVVLPTNESSDRLLRIRHTCAHVMAMAVQKLFPNSKVTIGPWIDNGFYYDFDMEPLTDKDLKRIKKEMDRIIRKNLPLVREEVSREEAQKRIEALNEPYKLEILEGIKEEPITIYHIGEEWWDLCAGPHVESTGKIDRRAVELESVAGAYWRGDESNQMLQRIYGTAWETEDQLKAYIHFKEEAKRRDHRRLGLDLDLFSIQEDAGGGLVFWHPKGAIIRHVLEDSWKQIHLQRGYDLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVEDELYQLRPMNCPYHILVYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATLALKDALEDKGWEYKVDEGGGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVNSNSEKKRPIMIHRAILGSLERFFGVLIEHYAGDFPLWLAPIQARILPVTDNELQYCNEVASELKSKGIRAEVCHGERLPKLIRNAETKKVPLMAVVGPKEVQARTLTIRSRHSGEIGTMPVDEFFRRMQLAIANKSSSL</aaseq>

Gene Sequence

<dnaseqindica>1..324#467..613#727..874#987..1240#1816..2193#2573..2881#2949..3149#3430..3693#ATGGCGGCCGCCGTCTCCGCGCCCCTTCTCCGGCTCCACCACCACCACCGCTGCCTCCTCCGCCACTCCTCCTCGCCGCGCCGCTACCCAGCCGGCTTCTCGCGTGGGCTCAGCTCCGTCTCGTTCGGCCTCCCGCGCAGCACCAGCACCGCCGCGCGCTCCACCGCCTCGCCCTCGGCGCCGTCGGCGGCGGCGGCCGAGGCCACGGATGCGGCTTCCGCCCAGGCGGGATCCGACGGCAAGGGGGATGGGATTGGGGAGGAGGAGCGCGTCGTGCTCCCCACCAACGAGTCCTCCGACCGCCTGCTCCGCATCCGCCACACCGTACTTGCTTTTTGCTGCCTCCCATTCCTCACTTCTCTACCTGTCATTAATCTGGTTTATTCCAATTTCGTGTTGATTTCGCTAACCAATTATGCTGCTATGTCGTTGGTTGATTCGCGTCATCCTTTGCTTGCTGCTCTAGTGTGCGCATGTGATGGCCATGGCCGTCCAGAAGCTGTTCCCCAACTCCAAGGTGACAATAGGTCCCTGGATAGACAACGGATTCTACTACGACTTCGACATGGAGCCCCTCACGGACAAGGACCTCAAGAGGATCAAGAAAGAGATGGTATGTATGTAACCGAATTGATTGATGTGTTCCTTTTTTGTAATTCTCTGAACGAACGAACTAAATTGTTGGGGTGAATTTTTGAGTTGCTTAACATGCTATGGTGGTGGTAGGATCGGATCATCCGGAAGAATCTCCCATTGGTGAGGGAGGAGGTGTCCAGGGAAGAGGCCCAAAAGAGGATTGAAGCGCTTAATGAGCCATATAAGTTGGAAATTTTGGAGGGCATCAAGGAAGAACCTATCACAATCTATCACATTGGTTTGTAGTGCCATCTCGTTTGATTTTGAGCATTACATTTTCGTCATGCATTTTTTTTTTGGTTGATCGGTGGAATCTATGCTCATGTTGGTGAATTCACTGTATACTGTAGGAGAAGAGTGGTGGGATCTCTGTGCCGGACCTCATGTCGAGTCTACTGGCAAAATCGATAGAAGAGCTGTTGAGCTTGAGTCTGTTGCTGGTGCTTACTGGAGAGGTGACGAAAGTAATCAAATGCTACAAAGAATATACGGGACTGCATGGGAGACTGAAGACCAATTGAAGGCTTACATCCACTTCAAGGAAGAGGCCAAGCGCCGTGATCATCGGCGATTAGGTCTGGATCTTGATCTATTCTCCATACAGGTATAATCTTAATTCTGCAACTAATTAACTCGAGAACCATATGGCGGTAATTTGTTAGTAACGGCAAGTCTCAACCTTCATATCCAACATATATCATCTTGTTGATCTTTTTCCCCCTCCATGATATTGGTTATATAATTTTAGCATTACAGTGTGCCATAGCCTCTTTGTATGGTTAGAGTGTGCAAGTCAGTCAGTCCTTTCTTCTTTAATGCAATAGCCATATTTTGATATAGCATCTCAAAGTAATGGAGTTGACTCCCAAGTATTAGAATGCCTTGTTAGTTGTTAGTTGTTAGTTTGTTACACTACCAGATATGACTGTTAAAAACTTAAAGTGGCACCTTCATTCAAATCATAGAACTTCATTTTGCTGTTAGTCTGCTACCACCAACATCTGCTGATGCTTCACACGTATTTGCTACAGACCACCAATTATGGCACAGTATCATCCATGTTCCATTGGCTTAGCTTTACAACCCTATGCCACTTTAATTCAGGCCTGATTACATGCATATCCAACTTTTTTTTTTACTTTTTATTTATAGTAACTGTAGAATATGAATTTTTAACAGGAAGATGCTGGTGGCGGTTTAGTATTCTGGCATCCAAAAGGTGCTATTATCAGACATGTTTTAGAAGACTCATGGAAACAGATTCACTTGCAACGTGGTTATGATCTATTATACACTCCCCACGTTGCAAAGGCTGAACTTTGGAAGGTTAGTGGGCATATCGATTTCTACAAAGAGAACATGTACAATCAAATGGATGTTGAAGATGAGCTATATCAACTTCGGCCCATGAATTGCCCTTACCACATTTTAGTATACAAGAGAAAGCTACATTCATACAGGGATTTTCCCATTCGAGTGGCAGAGCTTGGAACTGTCTACAGATATGAACTATCTGGTAGTTTGCATGGGCTGTTCCGTGTCAGAGGATTTACGCAGGTGCCTCTCTACTTCAGAATTCTGCTTCTATTTTCTTTCTGATGGAATCATGCTGGTTCTATGCATTCTGCAGTCACTGAATTCAAATATATATTGTACATTGTGATTTGTGTCATTATGGCATGTTTTTCTAGTGAGTTTTCCTATGTATTGTACTAACAGATTTCATTAAGTACTACTACTTCCTCCGTTTCAGGTTATAAGACTTTCTAGCATTGTCCACATTCATATAGATGTTAATGAATGTCACATATTCATTAACATCTATATGAATGTGGACAATGCTAGAAAGTCTTATAACCTGAAAACGGAGGAAGTACTACCTTTTGATTTCATAACCTTTCTTGTAATTTGTTTTTAAATGTGTCCATTTGTGCAGGATGATGCCCACATATTTTGTCTGGAGGACCAGATAAAAGATGAAATTAGAGGTGTTCTTGATCTGACTGAGCAAATACTGGGCCAATTTGGCTTTCGGTATTATGAGATAAACCTTTCAACAAGGCCAGAAAAATCTGTTGGCAGTGATGACATATGGGAAAAAGCAACACTTGCACTAAAAGATGCACTAGAAGACAAAGGTTGGGAGTACAAGGTTGATGAAGGTGGAGGCGCTTTCTATGGCCCAAAAATTGATTTGAAAATTGAGGATGCTCTTGGAAGAAAATGGCAATGTTCCACTGTGCAGGTCAGTTGTATATTTATCGAAAATCTTTGAGCACAATGGACCACGTTAACAGTTTACTACATTACAGGTCGATTTCAATTTACCTGAGCGGTTTGACATTACTTATGTCAATTCAAATAGCGAGAAGAAACGGCCTATCATGATTCATAGAGCTATCCTTGGGTCTTTGGAACGATTTTTTGGTGTCCTCATTGAACACTATGCTGGTGATTTTCCACTTTGGCTTGCACCAATCCAAGCTCGTATTCTACCTGTGACAGACAATGAGGTTTGCTTCATTTACTTTGATCATCTAGATGCATGACTACATGTGCTATTAAATTAAAAGCACCCAACTTCAGTTCGTAACAGCATCATTTATCTGAACAACCGAAGTCAGGACATCAGTGTTCTTTTGCATCTGTATCCTGGTTGATTTTATTAGTGTAGATTAAATCTGTTTAAGACTTCAACCTAGCATCTTTTTTGTACTTTTACTTTTGGCTCCATTCAGGAGATATTTCCAGGTATTTGATGTAAACCAGCTGCATCTTGTTTCACATTTGCAGCTGCAATACTGTAACGAGGTGGCTTCAGAACTGAAATCAAAAGGCATTCGAGCTGAGGTATGTCATGGCGAGCGTCTACCAAAGCTAATACGGAATGCCGAAACGAAGAAAGTGCCGCTCATGGCGGTCGTTGGGCCTAAAGAAGTTCAAGCCAGGACCCTCACTATCAGGTCCAGGCATAGTGGGGAGATTGGTACTATGCCTGTGGATGAATTCTTTCGCAGAATGCAACTTGCTATTGCGAACAAATCTTCTTCACTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006302

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