BGIOSGA006506

From RiceWiki
Revision as of 02:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006506| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006506, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006506

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006506, complete gene.

LocusTag

OSJNBA0035A24.52

Ensembl Transcript ID

BGIOSGA006506-TA

Ensembl Protein ID

BGIOSGA006506-PA

Length

4515

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16833321..16837835

Sequence Coding Region

16837718..16837835,16837002..16837112,16836115..16836191,16835786..16835867,16835579..16835634
,16834941..16835027,16834528..16834618,16833321..16833442

Genome Context

<gbrowseImage1> name=IndicaChromosome02:16833321..16837835 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:16833321..16837835 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTGAGCTTGCGAACAAGTTCTTGGTTCTTCATCTAGATGGTGAAGGTGGTGGAGCAGATGATACAGAAGAAGCACTGATCCAAACATCTTCCAGCATCAAAGAGGCTGATGCCGGTGAAAATGCGCTGAGTGACACGTTGGTACTAAATTACGATGAAGGATCTCTTGTATCATCATCTGGTGATTACCAGATGCCTTTGGTGTGGATAGACTTGGAAATGACTGGTTTGGATGTTGCAAAGGATCGGATATTGGAGATAGCTTGCATCATAACGGACGGTAAACTTACAAAACAAATAGAGGGCCCTGATTTGGTTATAAATCAGAAGAAAGATCTGTTAGATAACATGGATGAATGGTGCAAAACTCATCATGCAGCTAGTGGATTGACACAGAGAGTACTACAGAGTACGATTTCAGAGCATGACGCAGAGACACAAGTGTTAGATTTTGTTAAGAAGCATGTTGGTTCATCTCCTCCATTAATAGCTGGGAATTCTGTTTATGTGGATTTACTATTTTTGAAGAATTATATGCCGCAGCTTGCAGCCATCTTCTCTCACGTTATTGTTGATGTGAGCAGTATAATGGCTTTGTGCATCAGATGGTACCCCAAAGAAAGGAAGCGAACTCCTCAAAAAGGGAAAAAACATAGGGCAATGAATGATATCAAAGAAAGCATCGCTGAACTGAAATACTACAAGGACAACATTTTCAAACCTCAAAAATCTAAGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MSELANKFLVLHLDGEGGGADDTEEALIQTSSSIKEADAGENALSDTLVLNYDEGSLVSSSGDYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKKDLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVGSSPPLIAGNSVYVDLLFLKNYMPQLAAIFSHVIVDVSSIMALCIRWYPKERKRTPQKGKKHRAMNDIKESIAELKYYKDNIFKPQKSKQ</aaseq>

Gene Sequence

<dnaseqindica>1..118#724..834#1645..1721#1969..2050#2202..2257#2809..2895#3218..3308#4394..4515#ATGAGTGAGCTTGCGAACAAGTTCTTGGTTCTTCATCTAGATGGTGAAGGTGGTGGAGCAGATGATACAGAAGAAGCACTGATCCAAACATCTTCCAGCATCAAAGAGGCTGATGCCGGTAAAACCTGATTGTTACCCCTGTTCTTCTAAAGTAAACTAAGTAATGGATTATGGCATTACGCTGATATAGATTTCCGCTGCTTTATTCCTGCATAGAGAATTGCTACTGTAACTCATGTTTACTCCAGTATTCTTAGTTTAAGCAGTTACATTTTGTATAGTATGCCTGGGGGTTCACTGGACTACAATTTAACTTGAATTAAAAAAAAATCCAGCAAACCACGGTGCCTACTTTTGTACTGAATTCAGTTAGCCTTGCAAAATGTTTTGCTCTTTTGACATTATAACCACATGCCCTATATGTTTTAGAATATTTGATGTTTAATCTTGAATAAATTCCTTTTCTGTTATGTTGAAAATTTATTTACAATGGACTTGTTCCATAAGCATGTCTACCAGCGTCATGGTATGTATCTTATTATATAAAGGAATTTTCATTAAGCAAATGAAAGCATTATGATACATGTAAGGAAGACCCTTTTTCTTACCTGTAACTACAACTGACACTTATGTTCATGTCTTATACGATTCTTTCCATTGAATTTCTTATTCTCAATCAATATATATTCATTAATGGGGTTAGATGTTGCATCCACCATGCAGGTGAAAATGCGCTGAGTGACACGTTGGTACTAAATTACGATGAAGGATCTCTTGTATCATCATCTGGTGATTACCAGATGCCTTTGGTGTGGATAGACTTGGAAATGACTGGTGTGTTTTTTGAGTTATCACTTGTTTATCTTGCAACATTATGGGAAGAATTCATTTTTATGTTGCATTTTCATTACTTTTTTCGTCCTAACAGTTTGTGTTTTTATCATGCTTCAGAATAGAATGTTTTATTATTATTATTATAATGTTTCTCTAAGGAGAGATATGGTATCATTTCGTTATTAATGGACCTTTAATAAGTATATATGCACACAGTTGATATGTAAATGACAAATCATTCAAGATTGCTCAGTGGTCTGGATTATATAGCAGTAATTTTTTAACAGAATATCAGTGGTCTATTAACATGGTATCAAGCCATTGTTCACTTGTTCGGTCTGGATGATATAGCATTTTTCACAGAATATCAGTGGTCTATTAACATGGTGTCAAGCCATTGTTCACTTGTTCATTGTGAAAAGGGAGACATACATCAAATTTCTGATGTGTGGGTTTCATTAGTCGGGCTATAATCTTGGATTCTAATGAACAACAGAACAAATTTCGAACCAAATATGGTTATCTCCAGATCTCCTATATCCTATATAATTGGTTAGTTGGTGGTCTTCAACATCCAATAAGAAGGATAATACTGGAACTTTGGTAGTGATAGCTAAATGTTGTTTGATTTCTGATCTGATGATGGTTGCTGCAGTTGGGAATTTAATCACTCTTTGCATCTCTTTCTCTCAATTAATTGTTTTATGTATAGTTAAAAGAAATATATTTCAGATCATGTTTTGTCTTTTTTACATCATACCTAAAATAATTAGGTAGGACTAATGGGAACTCACTTATTGGATAATGTAGGTTTGGATGTTGCAAAGGATCGGATATTGGAGATAGCTTGCATCATAACGGACGGTAAACTTACAAAACAAATAGAGGTGGCAGTTGAATTTAAATACCTTCGTAGTTTGTTCTACATATATTCTGGATACTGTAATTCGTACAACACAATGGTGTTCTTTTCATCACATCCGCTATTTTGATTAATACTAGATGAGTGACCGTTGAATGCTACAAATATCATATGTTATGAAACCCACAGCTATTTGTTAATCTAGTCTGTTCCTTAGTTCTTTGTTCAGGTGCCAATTGAATATTATGACATGACTGTTTTTGGTTATGCAGGGCCCTGATTTGGTTATAAATCAGAAGAAAGATCTGTTAGATAACATGGATGAATGGTGCAAAACTCATCATGCAGCTAGTGGTAAATTGTTTGTATTTTTTTTCCTGAATACACAGGAGATCTGCGTATCATTTCATTAAGAGAGAGGTTGTTTGTTATATTCAAAGTACCATTTTCTTGTTGTGTGTTAATTTTCTAAATATTAATCTTATGACATGTGAAACTTATGTAGGATTGACACAGAGAGTACTACAGAGTACGATTTCAGAGCATGACGCAGAGACACAAGTATGCATATGTTTACCCTCGTATTTTTCAACATATTGGTAGACATGCTTATGAAGTTACATCACTCAACCAATATGTCTCAATGTTTAAACCTTTGGTGTAGTTTAGGACTTCTTTAGTTGCCTATTTGCTACTTGAAACTCACATTTCGTATAACATTTTGGTAAATGTATTTATATCAAATAGTCATCATGATTTAAATTTGCAGTATAGTTTCATTTACTTATCCTCATTCTGAATAATATGATATTTGTCAGAATAAGTGGCTCTAGTAATATATTGTATTCCTATAGGTCTAGTTTACGCCCAGAACTACAGGGGTTAGTCTACTTGACTCCCTGATGGAATGATGACTATGTAACGAGCTAGAGATAACTGCACAAATCTTAAATCCTAATTAGGTGCTGCTGGTAGCGTCCCCTGTCTGAGCCCCTTGCATCCTCCATGGCTGTGACTTGCCCATGACAAGATATAAATTAATGTGTATCTTGAAAGATTACATAGTTACACTAATGTTTTTGTAATAGAAGCTTCTGTTGGTCCATTTGCAGGTGTTAGATTTTGTTAAGAAGCATGTTGGTTCATCTCCTCCATTAATAGCTGGGAATTCTGTTTATGTGGATTTACTATTTTTGAAGGTTAGTAAGAATTGCCCTTTAGAGGTGTCATATACTAGCTGGGATATTGATGCTTTATTTCTTTTACTTTGTGCAACACAGTGAGAAATGATACACAGTGAGATGAGCATTTTTTTCTGGGGACATTTTCTGGTCATGGACCAACACATCTGCCCATTATGAATTCTTCACTCTGAACGCATGTTATTGCACAAATATATGCTCAATATTTCTTGCGATACTAGGCATAACATATTGATCATTTTTGCAAGGTTTTTCCATTTTAAATATGACTTATAATCCCTTGGAGGATGATATTTCTATTTTATACTTTTCTTTACAGAATTATATGCCGCAGCTTGCAGCCATCTTCTCTCACGTTATTGTTGATGTGAGCAGTATAATGGCTTTGTGCATCAGATGGTACCCCAAAGGTGAACTAAATTTTTTAAGTTCTGCCTGATGAGTATTAGTGTTTGACTGTTTTCCTAATTCCTATCAAGTCTGGGATATTCCATTAATTTATTTGGTAACTGCACTTATTTGTCTGCCAATAGGGATACAGTTTTCCTATTTCTTAACAGTATTTTTGCTTCAAGTGTTGCAATGCCATGAAGAATTGCAACTCGTATTATGATACTATGGAGAAGACTTTTTTTATTTATTTATTATGTTTGAGAAGACAAATAAAACAATTCAATGCCAATATTCTTCCAAGCCTACTATGATCTTGATCCTTACATACCCTTATTTGATGACACGTTACAACTAGTAAATCACTCTCTCAACACTAAAAATCAAGCTAAGAGTAGGATCATTGCAATTGCTAAACTTTAGATTTCTTAACTGAAGTCGTGAAAGTACACAACTATTATGAAACAGAGCCAGGGTGTAACTAAACAATTGCCATGAATAAATACTCCAGTTTGTTTCCAAACAAAAAGAAAAATCTCCAGTTTCAGTAGAAAAACTAGCCAAATGACAGCATTTGTTAGCCTGGTACATATCCCTGTTAAATTTTAACATCATGATAGTTGTTGTTTTATGCTCCCTCCATTGACAAATGTAAGTCCTAAAGTTTGAAATTGAATGGTCTTGTTAAAAATTGTCTTGTATGAAGCTTTTTAATGAGGTTTCATTACTGTGCATCTTTTTTACTCTCTCTCTCTCTCTCTCTCATATGCATTTATGTATTACCACCCACATCTTCATAATCCCAAAATAATTACATTTGTGGTGCATTTCAAGTTTTTATCATCTATATCCTTGTGTGAAGTCAACGTGTGCCTATGTTAATCAACAGAGGGAGGAGATGTTTAGATTTTGCGTCAACTCAAATTAGAGCTTTAGTTCTACTGAGGTTCAATGTAGTGACATTGTTCTATCAAAGGTCATGTTGCTGGCTGTGCCAGCATCTTCCACGCATCATTAAATTCTAAATTCAAGATCTCCTGTGATGTGAAATAAATCGTGCAAATATATCGATGAAACTTGACATCCTTTGCCACGTTCTTCGCAGAAAGGAAGCGAACTCCTCAAAAAGGGAAAAAACATAGGGCAATGAATGATATCAAAGAAAGCATCGCTGAACTGAAATACTACAAGGACAACATTTTCAAACCTCAAAAATCTAAGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006506