BGIOSGA006713

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Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006713| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006713, complete gene.| tag = P0413A1...")
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Gene Name

BGIOSGA006713

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006713, complete gene.

LocusTag

P0413A11.5

Ensembl Transcript ID

BGIOSGA006713-TA

Ensembl Protein ID

BGIOSGA006713-PA

Length

3697

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10758175..10761871

Sequence Coding Region

10761709..10761871,10760467..10760522,10759291..10759469,10758419..10759092,10758175..10758269

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10758175..10761871 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10758175..10761871 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGGTTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGA</cdnaseq>

Protein Sequence

<aaseq>MASLSTPPATAGVSPSPRPSLLAYKKAAGLTPSPWCGWRRAAVATAATSSNRTAAPAETIVTGNDVPLLSFAEVAERLDEFHASGTRNQNYMAMYSSIFGGITTNPSAMVIPIDDHMVHRGHGVFDTAAIMNGHLYELEQHLDRFLKSASMAKITLPFDRSTIRSILIQTVSASKCTQGSLRYWLSVGPGDFQLSSAGCANSALYAIVIESPSLPVPAGCKVITSSIPIKSQQFAVMKSVNYLPNALTKVEGEENGGFTGIWLDDEGFVAEGSNMNVGFVTQSKELLMPRFDKILSGCTAKRVLTLAKQLVADGRLSGISSRNVSVQEGKAADEMMLIGSGILVKPVVQWDDQIIGSGKEGPIAQMLFNLILEDMRSGPPSVRIPVSY</aaseq>

Gene Sequence

<dnaseqindica>1..163#1350..1405#2403..2581#2780..3453#3603..3697#ATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGGTTAGTCTTCCTCCTTGGGTTCTGCTCGAATTCGCGGGTTGGGTTCTAGTGCTGATCGGGTTCTTGCGCCTGCCATCTCCTACCTTAGGTTGGAGCCAAAGAGATGGAAACTTTTTTTTGTTCTAAATCCTTCTATCAGTTCTGAATTCTGAGGCTAAAGGTTGCACTCCCGCTTGTTCCAGCTCCTCAGTTTGCAGCTTCAGGTTCAGGATAATGGAGGAATGGATATAAGTGCGGTACTTGCATTCTGCATTCTTGTTGGTGCGGGTCCCAGTTCGGATTGGGGTACTAAGATTTTGCATAAGTTCGAAAAGTATCCTAGTGATTCCAGGAGATCATGCAGTAGTTCTGTCATGCAGTCTGCTCTTCAAATTTGCATGTCTGTTCATAGTTGTTCATAGCTCTGTCAAATCTGCATGCTTGTTCATAGTTCTGTCAAACTTGCATGTGTGTTCATAGGTTGATGAACTGAACTCTATATGGAGTGGTGGGGGAATGTGGATATTTTTTTTCCCTGGTATAGGTCTTCTGTGAGCAACTGCTTTTGAATTTTTTAGTAATAACAGTGAACTTCCAAGGCTGGAAAGGTATTTTGGTTGCGTTCTGAGTTCTCATGCTGATGAAATTCCGTGGTTGGTTTAGTGACCCGATCTGATGATGATCCTTAGAGTTGGGCTGATGCAATGCGAGGACAGTTTCGTTAGTAAAAAACTGCAATTTGTAGTTCACAAGATTGTAACAGTTTGTCATGGTTCCCTGTCGCTTTCTTAGTGGTCTGGATGTGCTTGAAATAGTTGGATATATGCAAAATGGGCTGATGTGAATATGAAAGATCGTATCTTTATGATTAAATATGAGGTATGCCCTTTGATGTTGACTTTAAGGTTGCTGCCAGGGTGCTTTTTTCTTTCTTTCTTTTTTGTTTTAGCTAGTTTTGAAAGCAATTCTTGGCATTTGTTGATAGAATTTTTTTGATAGGAAAATACCTGTACATTTTTTTGTTAAAATATGATTTTCAAAACCTTAAATGAGCCTTGCATGGTTGTTTTTCTCACCTTAATGATTCCTCGGTTTAGCTCTGATATCATTGCTTTGTTCTTCATATAGTGTGCTTCTAGGAGACTATGATGCCTTTTGTTTTCAATAATGTTTTTCATGCAACTAAACGGTATTCTTTTCACTGCAGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTGGACTTCCTTGTCTTTTCTGTGTTTGTTGGCACCACTTTCAATACCATCTTCGCACAATATTTGCAAGAAGAAGTTGGATTCTCCTTTTGTTTTAGAGAGATCGTCTTGTTCTGATTACCATTCCTCTTGTCTTAATTAATCTTCACTTGACTGATACCTGATTATCTACCTCATATAGTACATTGTTATCATCCACTCAATTTACATCCATACTAGTATGTATTAAGATTTTTTAGAACCATTTTGCTGCAACCACAGTATGATTAGAGCAGCCCAACGTTTCAAAACACTGTTTCCTCTAGGCTTTTTTTAAGTTGACTACGGTTTAACAGTCCACAGTAGTGTGCAAATACATTTGTGGATTACATTGCTGACTTTTTATTCAAGAGCAAAAACAACATATCACCCTTATATGGAGAATCGGATAAAAAAATTTGGAGTAATCTTCTTTTTTGTTGTAAATATATTTGTATCTTTTTAATAATCATGTACCAAAGTAGGACTACTGTTTTCCCTAAAAAGAAGTTAACTCTGTATATTTTCTAGCATCATTTATATTGCTACAGGTAAGAATGTCCAACAAGTCCTAGTTGAAGCCATGTCCTAGTAGTTGACATGAGGGTGGTAACTGGTGACAACCTTTGAGTATTTGTTTAGTAACTTTGATCTTGCAGTTTAACACAATCGGATTTGATAGGACTCTGAATAACTTAAATTATGCACCAAAACACTGATAATCTGAATTGAGCCCTTTAACAAGTTCCATCTTTGGATATAGTTCCAGTCATGCTGATTACTGTGTTTCCTATCTCTTTGAAGTATTAATTACAAGTATTACTAGTTTTCAGAGAGAAGGGGTATTCATAACAGTATGTGGTTTACTATCTGTCTAAGAGGTGCTCACGATTCATGAAATTATCAAGCAGAGTAGGATCTTGTCTTGAAAAGTGCTATGACAACAGATATGTAAAGTCAAAAACTTTTTCTCTTATAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGTGAGATCTTTGCTTCAATCAATTATGCCAACCCCCAAAAAAACAGATACTTGACTATCAATAGGAAATTTGTTTTGTTTTTTTAGTGTGTGGAAAATTGTAAGTGAACAAGAAGGGATCATTCTTTTTACTAAATTTCCATTCAGTTCTGATCCAAACACCATATTATCAGTATTAACTTTGTCATATTACTGTCAGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGGTTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGTAAACAGAATTTCACCCCTGAAATTCACCTAGCTGTCGTTGTTTGGAAGAGTATCATTTTGCACTCTGCAACAGAAAGTGGATGGCTTTTAGCCCTTCAATGGCTTCCTGTAAACTTCATGCTAATTTCTTTCCTTGTTCTAACACAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006713