BGIOSGA006735

From RiceWiki
Revision as of 02:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006735| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006735, complete gene.| tag = OsI_066...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006735

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006735, complete gene.

LocusTag

OsI_06666

Ensembl Transcript ID

BGIOSGA006735-TA

Ensembl Protein ID

BGIOSGA006735-PA

Length

3505

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10314959..10318463

Sequence Coding Region

10318320..10318463,10317238..10317348,10317034..10317132,10316881..10316943,10316439..10316739
,10316006..10316145,10315354..10315514,10314959..10315307

Genome Context

<gbrowseImage1> name=IndicaChromosome02:10314959..10318463 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:10314959..10318463 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGTGCCGGGGAGCCAGAACGGGCGGCCGAGGCCGGCGAAGGCGGAGACCATCCACGGCCTCGCCCGCGCCGGCGACCTCGCCGGCGTCCAGAGGAAGCTGCAGGAGAATCCCGCCCTCATCAACGACCGGAACCCCGTCATGTCCCAAACACCGCTTCATGTCGCAGCTGGCTACAATAACACTGGCATAGTCAAATTCTTGCTTGATTTCCAAGGCACGGATAAAGTTGAGCTGGAAGCAAAGAACATGTATGGAGAGACACCCCTGCACATGGCTGTGAAAAACAGTTCTTGTGAATCAGCAAAATTGCTACTTGAACGTGGTGCACATATAGAAGCCAAAGCAAATAATGGCATGGCACCATTGCATTTAGCTGTCTGGCATGCACTTCAATCTGGAGATTGTAGCACCGAAGGCAAAATCCCTTCGAATCATATTCCTGGAGGAGCTGGTAATGAGAAGCTGCAGAAACTCCTCACTCGCCATATGGAAGAGCAAAGACAACGGAAAGCCCTCATGTCATGCCGTGAAGGAAAAGCAATGGCGGAGTTTGAAGAAGCAATATCACAAATTGTAGGATTACAGGACCTCAAAATGCAATTGCGTAGATGGGCCAGGGGAATGCTTTTTGATGAGAAACGACGAGCTATGGGCTTAGGGATTGCTAGCAGAAGGGCTCCCCATATGGCATTTCTTGGCAATCCAGGAACAGGTAAAACAATGGTTGCTCGGATTCTTGGAAAGCTTCTTCATATGGTTGGGGTTCTCCCTACCGACAAAGTTACTGAAGTACAGCGAACTGATCTTGTTGGAGAATTTGTGGGGCACACTGGACCAAAAACTAGGCGAAAGATACAGGATGCTGAGGGTGGAATTCTGTTTGTGGATGAAGCTTACAGGTTGATACCGATGCAAAATCTGATGATAAGGATTACCGGTGGTGGACGGCCCTTGGAGGAGATAATGTCTGTAATGGACAATGGCAAGATAGTTGTGGATATTTGCTGGATACTGAGGGTCACAAAGTTCTTTTATTTTGACGATTTCACCACAACAGAATTAGCAGAGATCTTACATCTGAAGATGAATAACCCAACTGAGAGCAGTTTGCTGTATGGGTTCAAGCTGGACCCAAGCTGCAGCATCGAGGTCGTTGGAGAGCTGATTGCCAGGGAGACAACTGAACAGCGGCGTAAACAGATGAATGGTGGCCTTGTAGACACGCTGCTCATCAATGCCCGTGAGAATCTAGATCTACGTCTTGATTTCAACTGCGACGATGCGAATACTATGATCACAATCACATTGGAAGACCTGGAAGCTGGCCTTAAGCAGATCTCCAAACAGCGGCAGTTGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MPVPGSQNGRPRPAKAETIHGLARAGDLAGVQRKLQENPALINDRNPVMSQTPLHVAAGYNNTGIVKFLLDFQGTDKVELEAKNMYGETPLHMAVKNSSCESAKLLLERGAHIEAKANNGMAPLHLAVWHALQSGDCSTEGKIPSNHIPGGAGNEKLQKLLTRHMEEQRQRKALMSCREGKAMAEFEEAISQIVGLQDLKMQLRRWARGMLFDEKRRAMGLGIASRRAPHMAFLGNPGTGKTMVARILGKLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQDAEGGILFVDEAYRLIPMQNLMIRITGGGRPLEEIMSVMDNGKIVVDICWILRVTKFFYFDDFTTTELAEILHLKMNNPTESSLLYGFKLDPSCSIEVVGELIARETTEQRRKQMNGGLVDTLLINARENLDLRLDFNCDDANTMITITLEDLEAGLKQISKQRQLQ</aaseq>

Gene Sequence

<dnaseqindica>1..144#1116..1226#1332..1430#1521..1583#1725..2025#2319..2458#2950..3110#3157..3505#ATGCCGGTGCCGGGGAGCCAGAACGGGCGGCCGAGGCCGGCGAAGGCGGAGACCATCCACGGCCTCGCCCGCGCCGGCGACCTCGCCGGCGTCCAGAGGAAGCTGCAGGAGAATCCCGCCCTCATCAACGACCGGAACCCCGTCGTGCGTGCCCGCGCCTTGCTCCCCCCCCTCCCTTTTGCTTCTTGTTCATTTAATTTAGTTTTTTTTAAAGAAATTCCGATCTTTTGCTTGCTTCTTGCGCGGTTTCGTTTGACACTCCTTGCAGTGTGGAGTGGACTGGAGTGAGCATTCGAGATTCGCAAGAGATGGGGTCTCTTTCGTTGTGAAGAAAAAATGTTGGTTTGATCGGATTTTGTGCTTGCTTCTTGGTTTCCATGAGCTTTGGTTCTTGGATTTTTATCCCCATGTTGGCGGTTTCCCCCATTTCGTTCCTTATTTAGGATGCTGAGGTGGTGCTTTCCTTGGGGGAATATTTTTTCTCCCCATCCTCCTGCTTGCTCTGATGTTTCTTTCTCGGTTTGTGATATGGATGCAAGTTTCTTTTCTCGCCAAGAGTTTGCAAAATTTCCTCTAGATTCGTTTAATTCCGACGTCGGTTCTTCTTTAGGTGGAATTTCAGACTATTGCAGCAATGGTTTTCAAACTGTCAATTTTTCTTTCGGTGGAATTTAGTTTTATGCAATTGTAGGTTTCTCTAATTCCTCTTTGAAATGGTTTGCGACTTCTCTTAGATTGGTCGCTTTCTTATACACTTTGTAACTCTGCATTTCGAGATGATTTAGACGTTTATGTTTGGTGAACTGATAATATTTGGATATCTTGTAATGTTGCTGCCACTGCAATCTTGATTTGCGCACAATTTGCAAATAGATCAGTAAAAGGATATTGCGTATATCTCAGTTCACAACACACCAAATTCCTGCCAGAGATAACATGAAGGCTAGACCTGAATTGCACGATGATGAATTTGATTAGTTTCTAAACAACTGAGGCCTTATTTTTTTTTTTGTTTTCTGACTAGAATTTTGTAGTGCATAATTGCTATGCATAATATTGTGCAGTACTGCATAATATTGTGTTCCTTACCTTCTCTTTGACAATGTACCATGCAGATGTCCCAAACACCGCTTCATGTCGCAGCTGGCTACAATAACACTGGCATAGTCAAATTCTTGCTTGATTTCCAAGGCACGGATAAAGTTGAGCTGGAAGCAAAGAACATGGTAATTGAAGTATCTGGCATTTGTTGCAGCCTTATTGGCACCTCTGCGACACTAATTGTATGCTCTGAGCTTAAGATATAAATTACTGCTTCTGTTGTTCTGCAGTATGGAGAGACACCCCTGCACATGGCTGTGAAAAACAGTTCTTGTGAATCAGCAAAATTGCTACTTGAACGTGGTGCACATATAGAAGCCAAAGCAAATGTAGGATCTGTCTATCTAGTATTACTTTTCTTTCTATCCCGTATTATTTGTGGGTATTCATATTTAATCTGTTTTAACTCATTGTTGCAGAATGGCATGGCACCATTGCATTTAGCTGTCTGGCATGCACTTCAATCTGGAGATTGTAGCACCGTAAGCGTGTTGCTAAGCTACAATGCGGATTGCTATGCAAAAGACGATGTATAGACACTTGATTCTTATTGTGGTAAATTGCTTTCTTTACAACAACTTTAGTGTACTGAATCTTGTTCTCATCACACATTGCCCCACCAGGAAGGCAAAATCCCTTCGAATCATATTCCTGGAGGAGCTGGTAATGAGAAGCTGCAGAAACTCCTCACTCGCCATATGGAAGAGCAAAGACAACGGAAAGCCCTCATGTCATGCCGTGAAGGAAAAGCAATGGCGGAGTTTGAAGAAGCAATATCACAAATTGTAGGATTACAGGACCTCAAAATGCAATTGCGTAGATGGGCCAGGGGAATGCTTTTTGATGAGAAACGACGAGCTATGGGCTTAGGGATTGCTAGCAGAAGGGCTCCCCATATGGCATTTCTTGGCAATCCAGGAACAGGTACCACAATTATGTTCAGTTTGATAATCAAAAGCATGATTTATCATCATGGTATTACGGTCATAATTACTATTTTGTGCACCGATGAATTTTATTGGAACAGTACAATTAAGAAATATGTATGCTTGGTGAACTTCTTGCATGTGATTCTTGCTTTGATGCATGCTGAAAGCATTTCTCCCAAAGCTTGGGTAAACAAGTTTTAAAACAATAAACAAGGCCATACAAATCATTCAAGTGTTTGTAGTTTAGGTGCTAAAGCCAGCTATATAATATTGCAACCTCTAATGTAGGTAAAACAATGGTTGCTCGGATTCTTGGAAAGCTTCTTCATATGGTTGGGGTTCTCCCTACCGACAAAGTTACTGAAGTACAGCGAACTGATCTTGTTGGAGAATTTGTGGGGCACACTGGACCAAAAACTAGGCGAAAGGTAGCTATGTTCTCTGTTCAATTGAGTTCTGAATTTTGTTCCCGTGTGACTATACAAACTCTATCCTTAAAAATGGAAATCGGAGTATTAAAGCTCCAACTATTTATCTGTTATTACTAGTTATGCAAACTATTTCTTATTTCTTACACTGGTCCTTAGTATTTGGATTCTTATGTTTTGCAAATACTTGCTTTTGTCAGAAGACTTGGTTTCTCAATTATCAATTTGAGATAAAGTGGAAAAGAAAAAAAATTGTTAAATCTGGAAAATAAATACTCCCTCCATCCCAAAATATAGTAACTTTGTCCAGATTCGTAGTACTAGAGTGTGTCTAATCCGGTCCTAGGTTGCTATATTTTGGGACGGAGGGAGTAGGTTTTAGGGACATTGGATAAATACATGGGTAGATTTGACTTTGGAGTCATTATGATTACACTTGTCATTGCTCTACTTAATTAACTTATACATCATAATGTGTATACATTCTACAGATACAGGATGCTGAGGGTGGAATTCTGTTTGTGGATGAAGCTTACAGGTTGATACCGATGCAAAATCTGATGATAAGGATTACCGGTGGTGGACGGCCCTTGGAGGAGATAATGTCTGTAATGGACAATGGCAAGATAGTTGTGGATATTTGCTGGATACTGTGAGCCCATGAAGCGCGTCATCGCCTCCAACGACGGCTTCTGTAGGAGGGTCACAAAGTTCTTTTATTTTGACGATTTCACCACAACAGAATTAGCAGAGATCTTACATCTGAAGATGAATAACCCAACTGAGAGCAGTTTGCTGTATGGGTTCAAGCTGGACCCAAGCTGCAGCATCGAGGTCGTTGGAGAGCTGATTGCCAGGGAGACAACTGAACAGCGGCGTAAACAGATGAATGGTGGCCTTGTAGACACGCTGCTCATCAATGCCCGTGAGAATCTAGATCTACGTCTTGATTTCAACTGCGACGATGCGAATACTATGATCACAATCACATTGGAAGACCTGGAAGCTGGCCTTAAGCAGATCTCCAAACAGCGGCAGTTGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006735