BGIOSGA007125

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Revision as of 02:51, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007125| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007125, complete gene.| tag = P0463E1...")
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Gene Name

BGIOSGA007125

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007125, complete gene.

LocusTag

P0463E12.2-1

Ensembl Transcript ID

BGIOSGA007125-TA

Ensembl Protein ID

BGIOSGA007125-PA

Length

4780

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3349452..3354231

Sequence Coding Region

3354213..3354231,3352072..3352759),complement(3350767..3351071,3349452..3350689

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3349452..3354231 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3349452..3354231 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCACCCTACGCAGGAGTACCTATTGATCCTGCTAAATGCCGATTGATGAGTGTGGATGAAAAGCGGGAACTTGTCCGTGAATTATCGAAGCGGCCAGAAAGTGCTCCTGACAAACTGCAGTCTTGGAGTCGCCGTGAAATTGTAGAGATTCTTTGTGCTGATTTAGGAAGGGAAAGGAAGTACACTGGATTATCGAAGCAGAGAATGTTGGAATATCTCTTCAGAGTTGTGACTGGCAAATCATCTGGTGGTGGCGTTGTGGAGCATGTGCAAGAGAAGGAGCCTACCCCTGAACCCAACACAGCCAACCATCAGTCCCCTGCGAAACGGCAGCGAAAGAGTGACAACCCATCACGACTACCAATTGTTGCAAGCAGTCCAACTACAGAAATACCCAGGCCAGCAAGTAATGCTCGCTTCTGCCACAATTTAGCTTGCAGAGCGACTCTTAATCCAGAAGATAAATTTTGCAGACGCTGTTCATGCTGTATTTGTTTCAAGTACGATGACAATAAGGATCCTAGCCTCTGGTTATTCTGTAGTTCAGATCAACCCTTGCAGAAAGATTCTTGTGTATTTTCGTGCCATCTTGAATGTGCTCTTAAGGATGGAAGAACTGGCATCATGCAGAGTGGGCAGTGCAAGAAACTTGATGGTGGTTATTACTGCACTCGCTGTCGGAAACAGAATGATCTGCTTGGGTCCTGGAAGAAACAACTGGTGATAGCTAAAGATGCTCGCCGGTTGGATGTATTGTGTCATCGGATTTTTTTGAGTCATAAGATTCTTGTCTCCACGGAGAAGTACTTGGTTTTGCATGAAATTGTTGACACAGCGATGAAGAAACTGGAGGCTGAGGTTGGTCCTATATCTGGAGTTGCAAATATGGGTCGTGGAATTGTGAGCCGGCTTGCTGTTGGTGCTGAAGTTCAGAAACTTTGTGCTCGAGCAATAGAAACCATGGAGTCTCTGTTTTGTGGATCTCCTTCTAACTTGCAATTTCAACGTTCACGGATGATACCATCAAACTTCGTAAAGTTTGAAGCTATAACCCAAACATCTGTCACTGTAGTTTTGGATTTGGGTCCTATACTTGCTCAAGATGTAACATGCTTTAATGTATGGCACAGAGTGGCAGCCACAGGCTCGTTCTCATCAAGTCCAACTGGCATCATACTTGCACCATTAAAAACGTTAGTGGTCACTCAACTTGTGCCAGCTACAAGCTATATATTCAAGGTAGTTGCCTTCAGTAACTATAAGGAGTTTGGATCGTGGGAAGCCAAAATGAAGACAAGCTGTCAGAAGGAAGTTGATCTGAAGGGTTTGATGCCAGGTGGGTCTGGGCTAGACCAAAACAATGGGAGCCCAAAGGCAAACAGTGGTGGTCAGTCTGATCCTTCTTCAGAAGGTGTGGACTCAAATAATAACACTGCGGTGTATGCTGATCTCAATAAATCACCAGAAAGTGATTTTGAATATTGTGAAAATCCTGAGATACTTGATTCAGACAAAGCAAGTCATCACCCCAATGAACCTACAAACAACTCACAGAGTATGCCGATGGTCGTAGCTAGGGTTACGGAGGTATCTGGATTGGAGGAAGCTCCTGGACTCTCAGCATCAGCTTTGGACGAGGAGCCCAATTCAGCAGTTCAAACACAATTACTTAGAGAATCCTCAAATTCAATGGAGCAGAACCAGAGAAGCGAAGTTCCTGGATCACAGGATGCATCAAATGCTCCTGCTGGAAATGAGGTGGTGATTGTTCCACCTCGATATTCTGGCTCTATTCCACCAACTGCACCTAGATATATGGAAAATGGTAAGGATATCAGTGGGAGGAGCTTGAAAGCAAAACCTGGTGATAACATCCTTCAAAATGGCTCTTCCAAGCCTGAAAGGGAACCAGGGAATTCTTCAAATAAAAGAACATCAGGTAAATGTGAGGAAATCGGCCACAAGGATGGATGCCCAGAAGCATCTTATGAGTACTGTGTTAAGGTGGTCAGGTGGCTGGAATGTGAGGGTTACATTGAGACCAACTTCAGAGTGAAGTTTCTGACTTGGTATAGCCTTCGTGCTACCCCTCATGACAGGAAGATAGTCAGCGTCTACGTAAACACTCTTATTGATGATCCTGTTAGCCTTTCTGGCCAGCTTGCTGACACTTTCTCTGAGGCCATCTACAGCAAAAGGCCACCTTCTGTTCGCTCCGGTTTCTGCATGGAACTTTGGCATTAA</cdnaseq>

Protein Sequence

<aaseq>MDPPYAGVPIDPAKCRLMSVDEKRELVRELSKRPESAPDKLQSWSRREIVEILCADLGRERKYTGLSKQRMLEYLFRVVTGKSSGGGVVEHVQEKEPTPEPNTANHQSPAKRQRKSDNPSRLPIVASSPTTEIPRPASNARFCHNLACRATLNPEDKFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDSCVFSCHLECALKDGRTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKKQLVIAKDARRLDVLCHRIFLSHKILVSTEKYLVLHEIVDTAMKKLEAEVGPISGVANMGRGIVSRLAVGAEVQKLCARAIETMESLFCGSPSNLQFQRSRMIPSNFVKFEAITQTSVTVVLDLGPILAQDVTCFNVWHRVAATGSFSSSPTGIILAPLKTLVVTQLVPATSYIFKVVAFSNYKEFGSWEAKMKTSCQKEVDLKGLMPGGSGLDQNNGSPKANSGGQSDPSSEGVDSNNNTAVYADLNKSPESDFEYCENPEILDSDKASHHPNEPTNNSQSMPMVVARVTEVSGLEEAPGLSASALDEEPNSAVQTQLLRESSNSMEQNQRSEVPGSQDASNAPAGNEVVIVPPRYSGSIPPTAPRYMENGKDISGRSLKAKPGDNILQNGSSKPEREPGNSSNKRTSGKCEEIGHKDGCPEASYEYCVKVVRWLECEGYIETNFRVKFLTWYSLRATPHDRKIVSVYVNTLIDDPVSLSGQLADTFSEAIYSKRPPSVRSGFCMELWH</aaseq>

Gene Sequence

<dnaseqindica>1..19#1473..2160#3161..3465#3543..4780#ATGGATCCACCCTACGCAGGTCGGTCAGCGCCGCCCCCGCATCCGCGGTTTTCGCCTTGTTTTTTTTTTTTTGTTGTTGTTGTTGCGTGTGTGTGGTGGTGGTGATGGCTCAGGTCTCGCGGCGGCGTCGGGGGGAGCTCGATCTGTTTGTTCCGGCGACGAATCCGCTGTTCCGGCGGTGTAATTGCGGGCTTGGTGGTGGAGGAGGAGGAATTTGTGGGCGTGGATTTTAGGGTGGGAGGCGGTTTTTTTTTTTTTTTTGGGGGGGGGGGTGGTGTAGTGTTCGTCGAGATTTAGACTTTTTGTGTGGATGGATGGATGGGTTAGATTATGCGCGCGTGGATTAGATTGCGGCGGTAGAGGGTTTGTACTGTTCATTGATTGGTTTGTTGGGTTGATTTGGAGCTGTAGCTGATGCGTGGTAGAGGGGTGGAGGTGGAAGCGCGTTGGGGAGGGTGGATGGCGATGCCGCTGGTGTCAGATTCGCCGCTGCATGCGGTGATGGGTACTCACATTGCGCCCCCTCTCTACCGGGGGAGGTGGCAGCGGAGTGGTTCCTGCGGCTTTACGTCGTTTTCGTGGGATTTACGTCCGCGGGCGTTGGTAGCAGCAGCCTATCCTCTTTTGGGACGGGAAAATAATATGGCGTTAGGCTGTTTGAGGCCTCCTGTTCGTGCGTTGGGTGTTGCATTGGTGCTGATTTGGTGGGATCACGGCTGCCGAAGGCGGGTTTGTTTGCTGTTAGTTGATGGTAAGGATTGGCTGATACGTCGATTATATCTTCTAGAGGAGCTGCGTCTACTTGCATGTCAAGGTTACCACGTTTAGGGGTTATATGATTGATGATAGTTTCTTTGTTTAGTGGTCCAAAATTAGAAAGACTCATTTCTTTTTAGTTTTCTCGTTTCCCTTAGACAGTCTGTAGAGAGTTGACTTTCTGCGGCTCGTGCCAGCTTCGATAGCTCTAGTTAACATTGCGCCTTGTGGTATCACAACTGTGCTTTGTAGTTCACATTTAGTCCTATACAATATGGTACATGTTGATGAGCCTTTAATTCTTAGATTATTGACCGAATCATCTTTTTTTTCCGAGGTTAAGACTTATTCTGTTGCAATGTGCTATAATTATAATTTGACTTCTACTCCAGTAAGACAGTGTGCTACTCACATTAATTTGATTCAGCATGTCGAGAATTTAATTTCCTTTGGAACGTCATTCATTGAGTTTTTCCTTGCACGCTAAGTTACTCAGTACCGTCTCATAGTTGTTCTGAAGAAGAGAAAGAATGATGCCTTCAAAATATGTATTCTTCTACTGGATCTAATGAACTTTAAACCTTTCCATTCTGGACTGTAAATATGAATGAACGTCTAAATTTCCTTCGTTGTTTGCTTCTTGTCCGACTGGATTTTGTAACTATTTCTGACTTTATCAAATTGATAATAATAGTTTCCAGTGTTCTCTTGTTTAGGAGTACCTATTGATCCTGCTAAATGCCGATTGATGAGTGTGGATGAAAAGCGGGAACTTGTCCGTGAATTATCGAAGCGGCCAGAAAGTGCTCCTGACAAACTGCAGTCTTGGAGTCGCCGTGAAATTGTAGAGATTCTTTGTGCTGATTTAGGAAGGGAAAGGAAGTACACTGGATTATCGAAGCAGAGAATGTTGGAATATCTCTTCAGAGTTGTGACTGGCAAATCATCTGGTGGTGGCGTTGTGGAGCATGTGCAAGAGAAGGAGCCTACCCCTGAACCCAACACAGCCAACCATCAGTCCCCTGCGAAACGGCAGCGAAAGAGTGACAACCCATCACGACTACCAATTGTTGCAAGCAGTCCAACTACAGAAATACCCAGGCCAGCAAGTAATGCTCGCTTCTGCCACAATTTAGCTTGCAGAGCGACTCTTAATCCAGAAGATAAATTTTGCAGACGCTGTTCATGCTGTATTTGTTTCAAGTACGATGACAATAAGGATCCTAGCCTCTGGTTATTCTGTAGTTCAGATCAACCCTTGCAGAAAGATTCTTGTGTATTTTCGTGCCATCTTGAATGTGCTCTTAAGGATGGAAGAACTGGCATCATGCAGAGTGGGCAGTGCAAGAAACTTGATGGTGGTTATTACTGCACTCGCTGTCGGAAACAGAATGATCTGCTTGGGTATTCTCCCTAAACAACTTTATTATTTGCACAGTTTTTTTTCCTGTTCTGTAACTATACGAAATTATGTTTTAATTATTCCTATGCCTCCAGTTTTTACTGCCTTAAGTAATGTTACCATTATTTATTGCAACGATAACTACTAGAAATATGTTAGTTTGACTTTTGTGAGAGTTAGCTTTGATAATTTGCATGCATTCTTGCTTTCCAGCCACTTTGATTACCTTACTGATTCTGTTTTTAGGATTCTTCGGTGAAGATCCTTGTAGTGTCATCATCATTGGTCCAATCATATGATGCATATTTCTCAATTGTGTCTTAAGAAGTGGGTTGGCTGCTTTTGCCCTTCAGCTTCATGCTTTGAGCTTGTGGTCTGTGTGCTTACTTCTGCATTAAGCTGAATTAGTGTTGGATTCTTCCTTCTCCATCTGGAGTAAATTTGTTTGCTGGGATAACCCTATTTTCATAGGTTGCGAGCTGCGAAAACAGGCTTTCGACTGCATTTTGGTGTCTTTGTGTTGCATTCCATAGGGTTCTTGTAGTTCAAGTTTCAGGGTATGAACCAAGTTACTAAGCCAGTAAAACTTGGTGAGGCACTGAGGCCAGGTGGATTCAATATTTTCAAGGATGAATAGATCATGGAGAAATGCTTAGACTAGTATATGCAAGGAGTCTCTAATTTGTCTGTGCATGTTTATAAGCCATTTGAGTAACCTGGGAAATAGGATTCATTTTGAAGTTTTGAACTACAAGACAAGTGATTAATTGTCTTTCTCAAAAGAATCTGCTTGGCTATTAGTATCTTGTAGTAGTAAGTTTTGAACCAGTTATATGTTATTTAGAGTTCAAGATTCTTTGGCCAGTCCAGCACAATGCACTTAAGTAATTCAATCAAGTTTACTGGCCCATTTTCCAAAACTATGCTCCTTTCAAGAGTTTGGATATTGAAACAGTAAATTAGCTTGCCGAGCAATACTTGACTGTTTAATGCCTTGTTCAGGTCCTGGAAGAAACAACTGGTGATAGCTAAAGATGCTCGCCGGTTGGATGTATTGTGTCATCGGATTTTTTTGAGTCATAAGATTCTTGTCTCCACGGAGAAGTACTTGGTTTTGCATGAAATTGTTGACACAGCGATGAAGAAACTGGAGGCTGAGGTTGGTCCTATATCTGGAGTTGCAAATATGGGTCGTGGAATTGTGAGCCGGCTTGCTGTTGGTGCTGAAGTTCAGAAACTTTGTGCTCGAGCAATAGAAACCATGGAGTCTCTGTTTTGTGGATCTCCTTCTAACTTGCAATTTCAACGTAAGTTTCCACGTGCTTCACGTTAGACCACATACATACAAATAGTGTTGAATTCTCATGCATATGTGCATTTTCAGGTTCACGGATGATACCATCAAACTTCGTAAAGTTTGAAGCTATAACCCAAACATCTGTCACTGTAGTTTTGGATTTGGGTCCTATACTTGCTCAAGATGTAACATGCTTTAATGTATGGCACAGAGTGGCAGCCACAGGCTCGTTCTCATCAAGTCCAACTGGCATCATACTTGCACCATTAAAAACGTTAGTGGTCACTCAACTTGTGCCAGCTACAAGCTATATATTCAAGGTAGTTGCCTTCAGTAACTATAAGGAGTTTGGATCGTGGGAAGCCAAAATGAAGACAAGCTGTCAGAAGGAAGTTGATCTGAAGGGTTTGATGCCAGGTGGGTCTGGGCTAGACCAAAACAATGGGAGCCCAAAGGCAAACAGTGGTGGTCAGTCTGATCCTTCTTCAGAAGGTGTGGACTCAAATAATAACACTGCGGTGTATGCTGATCTCAATAAATCACCAGAAAGTGATTTTGAATATTGTGAAAATCCTGAGATACTTGATTCAGACAAAGCAAGTCATCACCCCAATGAACCTACAAACAACTCACAGAGTATGCCGATGGTCGTAGCTAGGGTTACGGAGGTATCTGGATTGGAGGAAGCTCCTGGACTCTCAGCATCAGCTTTGGACGAGGAGCCCAATTCAGCAGTTCAAACACAATTACTTAGAGAATCCTCAAATTCAATGGAGCAGAACCAGAGAAGCGAAGTTCCTGGATCACAGGATGCATCAAATGCTCCTGCTGGAAATGAGGTGGTGATTGTTCCACCTCGATATTCTGGCTCTATTCCACCAACTGCACCTAGATATATGGAAAATGGTAAGGATATCAGTGGGAGGAGCTTGAAAGCAAAACCTGGTGATAACATCCTTCAAAATGGCTCTTCCAAGCCTGAAAGGGAACCAGGGAATTCTTCAAATAAAAGAACATCAGGTAAATGTGAGGAAATCGGCCACAAGGATGGATGCCCAGAAGCATCTTATGAGTACTGTGTTAAGGTGGTCAGGTGGCTGGAATGTGAGGGTTACATTGAGACCAACTTCAGAGTGAAGTTTCTGACTTGGTATAGCCTTCGTGCTACCCCTCATGACAGGAAGATAGTCAGCGTCTACGTAAACACTCTTATTGATGATCCTGTTAGCCTTTCTGGCCAGCTTGCTGACACTTTCTCTGAGGCCATCTACAGCAAAAGGCCACCTTCTGTTCGCTCCGGTTTCTGCATGGAACTTTGGCATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007125