BGIOSGA007234

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Revision as of 02:53, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007234| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007234, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA007234

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007234, complete gene.

LocusTag

OSJNBB0088N06.11

Ensembl Transcript ID

BGIOSGA007234-TA

Ensembl Protein ID

BGIOSGA007234-PA

Length

5161

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1110963..1116123

Sequence Coding Region

1116109..1116123,1115681..1115766),complement(1115426..1115548,1114249..1114303),complement(1113910..1114020
,1113708..1113758),complement(1113297..1113472,1113100..1113207),complement(1112893..1112966
,1112632..1112807),complement(1112421..1112516,1112255..1112335),complement(1112097..1112150
,1111220..1111354),complement(1110963..1111034

Genome Context

<gbrowseImage1> name=IndicaChromosome02:1110963..1116123 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:1110963..1116123 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCGTGCAGGTTTCTAGGATTCTTGATGGTGATATGGATGATTGTTCTGAGCTTGGGATGGAGCCGGTTCATACCAACCACTTGGCAAGACAAATGGTTCATCCCCCTCCTGCCTTTGGTTCTTGCTCCAACTTAGAGGCACTTGCGCTCGAGGCGAGTGAGGCTAATCTAAGGAGCAGTAACAATGATGAAGATAGCAGTGTTCATCTCATTTCCAGGCCAATGCATGAGATAACTTTTGCAACAACTGATAAGCCAAAGGTCCTTAGTCAGCTGACTTGCTTGCTTAGTGAGCTTGGTCTTGACATCCAAGAAGCGCATGCATTTTCAACAAGTGATGGTTACTCATTGGATGTATTTGTTGTCACTGGTTGGCACCTTGGGGGTACTGAGCAGCTAAAAGAAAAGTTGCTGGAGAAGTTTCATGACATTGAGACACAAGCTTGGCCAACATCAAACTCATCGTCACAATCATTGGAAGGTCCGTCAGGTGGAGAGAGTATGCCATCTACCAGTGTGGAAATACCAACAGATGGGACGGATGTTTGGGAGATAGATCTCAAGCTTCTCAAGTTTGGAACCAAGGTTGCTTCTGGATCAAATGGCGATCTGTTCCGTGGATCATACTGCAGTCAGGATGTAGCTATTAAAGTAGTGAGACCTGAACGCATTAGTGCAGATATGTACCGTGATTTTGCACAGGAAGTCTACATTATGAGAAAGGTCCGCCATAGAAATGTTGTACAGTTTATCGGTGCCTGTACAAGACAGCCCAACTTATATATTGTAACAGATTTCATGTCAGGAGGTAGTCTGCATGATTACCTTCATAAAAAGAACAATTCTTTCAAGCTATCCGAAATACTGAGAGTGGCGACAGATATCTCTAAAGGAATGAACTATCTGCATCAGAACAACATAATTCACCGTGATCTCAAGACAGCGAATCTTCTTATGGATGAAAACAAGGTCGTAAAGGTTGCAGATTTTGGTGTTGCACGTGTCAAAGATCAATCCGGAGTGATGACTGCAGAGACTGGAACTTATCGTTGGATGGCACCTGAGGTCATTGAACATAAGCCCTATGATCATAAAGCAGATGTTTTTAGCTTTGGTATTGTTCTATGGGAGCTGATAACTGGCAAGATACCCTATGAGTACCTAACACCACTACAAGCAGCCATAGGTGTTGTTCAGAAGGGCCTTAGACCAACAATTCCGAAAGATACGCACCCCAAGCTGTCTGAGCTGCTTCAGAAATGCTGGCATAGAGATCCTGCTGAAAGGCCTGACTTCTCCCAGATACTGGAGATTCTTCAGAGACTCCCCAAAGAGGTGAGAGCTGATACCGAGGGTCGCCAGAAATCAAAGGCAGGATTTCTTTCAGCATTGAAGAGAAACCACTGA</cdnaseq>

Protein Sequence

<aaseq>MAGVQVSRILDGDMDDCSELGMEPVHTNHLARQMVHPPPAFGSCSNLEALALEASEANLRSSNNDEDSSVHLISRPMHEITFATTDKPKVLSQLTCLLSELGLDIQEAHAFSTSDGYSLDVFVVTGWHLGGTEQLKEKLLEKFHDIETQAWPTSNSSSQSLEGPSGGESMPSTSVEIPTDGTDVWEIDLKLLKFGTKVASGSNGDLFRGSYCSQDVAIKVVRPERISADMYRDFAQEVYIMRKVRHRNVVQFIGACTRQPNLYIVTDFMSGGSLHDYLHKKNNSFKLSEILRVATDISKGMNYLHQNNIIHRDLKTANLLMDENKVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELITGKIPYEYLTPLQAAIGVVQKGLRPTIPKDTHPKLSELLQKCWHRDPAERPDFSQILEILQRLPKEVRADTEGRQKSKAGFLSALKRNH</aaseq>

Gene Sequence

<dnaseqindica>1..15#358..443#576..698#1821..1875#2104..2214#2366..2416#2652..2827#2917..3024#3158..3231#3317..3492#3608..3703#3789..3869#3974..4027#4770..4904#5090..5161#ATGGCGGGCGTGCAGGTACGCGCTGGATGTGCACGCGGATAGGGCGGAGGACGTGGTGACGCACCACCGGTTGCTGGAGGAGGCGCGCGATCCGGACCGGCGGCCCGCCTTGTCGGTGCGCGTCGTCCAGGTGAGAGAGATCCATCCATGGCTGCCTGCATGTCGGTCGATTTCGCGTACTGCTTAATTTCCATTAGATTTTCATTTCTCTCCTGTGGTGTTGCTCGGGGAATTTGATTTGTGCTGTCTCATGTTGTTCATTAGATCAAACTGAAGAGTAGAGCTTAGGTGTTGCATCAAACTGAAGAGACATTTTAATTCCTTGGCTTACCAAACTTTGTTTTCTGCTTGATCTAGGTTTCTAGGATTCTTGATGGTGATATGGATGATTGTTCTGAGCTTGGGATGGAGCCGGTTCATACCAACCACTTGGCAAGACAAATGTATGCATGATCTATCTATCTATCTATCTATATGCACATGAAGTTCGTTTACTTTCATGCATGTGTCTCCTTGGCTGTTCTTGTCTTTTATGCACGCTAATGGAGTAATGGTGACTACACAAATCGTTTCAGGGTTCATCCCCCTCCTGCCTTTGGTTCTTGCTCCAACTTAGAGGCACTTGCGCTCGAGGCGAGTGAGGCTAATCTAAGGAGCAGTAACAATGATGAAGATAGCAGTGTTCATCTCATTTCCAGGTAGATAATTCCCCTTTTCAGTTCACGTGTACCTCGCTTTATTTTGAGTTTAGGGACCCTTTGATTTGAATGAAAAACATAGGATTTTTGTAAGATTCAAATCCTATAGGCTTTTTTTTTTCCTATCTGGCCCTTTGAAACAAATGATTGAAAACTGTTGAATCCTATGAAATTCTTAAGGAATGCTCTATTCCATACAAGTTTTGGAGGATTTTTAACATGAGATCCAACCTCATGGAAAGTTTTCTATGAGTCTATCTCTCTCATTCAATTTTTGAATTTTTCCTGTGTTTTACAATCCTCTATTTTGCATTTGAATTCCTGTCGAAATCCTGTGTTTTTCCTATTCCTTTGTTTTCTCAATCCCGTGTTTCAGAGGAGCCCACTGTATTTGTCTTTGGTTCTTTTGGTTCATGTGCCATTCTGTACAATCATAGCGTGCTTAGCACTAGCTTGTAGTCTTGTACTACTACCTTACAAGGTTGGCATGTCGGCATGTTGCGATTCCCTTTTAAAAACTGTTTTTGATACTTCTCTATATCAATTAATTAACATGGTATTTTGTGTTACAACCAGAAAATCGCAGATTTTACCTTGTGAAGAATGCATGCCTCTGTGGCCTATTTTTTAACAAATGATAGCATCAGTGGATTAGTTGTTACTAACAGTTAGCTGCAAAACCATGATATGCAGAATTTCCTTTCCGAATATGGTACTTTCTCTGGCAATATTGCATTTGCATACTTGTTTAGATGTACAAGACATTTCACAAAAAGCCGATGCCACGCATGAGCTTCTTTGTTATGCGCTGGTTTGATCATGTAGTGAGTGGATTATGAAATTGTCAAAAGTACTCATAATTGGTGGGAGTAGTTCATTTTTTCAACTGAAGCCTTTATTCCCTCCGTTTCATAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGACATGATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTATTTATGGGCATTTTCGTTAGGATTATGCAAATAGTTGATTACTACTTGGATTCTATATATTCTCATTCTAGTTGATTAATTCTCGCTATATTCTGAATCTTGCAGGCCAATGCATGAGATAACTTTTGCAACAACTGATAAGCCAAAGGTCCTTAGTCAGGTAGGCATACTTCTTTCAATACAATCTTAACAAAGCGAAGGAAATTCAGAAGCTGACAAGTAGCTAGTTAGGAAAATCATTAGTAAAAATAAATGGACATATTTATTTAGAAAAAAAGATTAAAAAAACATTACAAATCTGTTTAATGTGAACTTCAAGGCAATTTTATACAGGACTTATGTCAGCAATTGTTTTGATTCTTACACTTTGCCTTTCATACACTTGCAGCTGACTTGCTTGCTTAGTGAGCTTGGTCTTGACATCCAAGAAGCGCATGCATTTTCAACAAGTGATGGTTACTCATTGGATGTATTTGTTGTCACTGGTTGGCACCTTGGGGTACGCACCCAGCATAATAGTGTTACTGTGTTAGTTTGTCTTGTCCTTATTGCAATTGGTCTTTAGAGCTAAACGCTTCAGTAGTTCAGTTAGTTCAGTAACATACTTCACTTTTCGTGTTGATAATTTGCTCTTTTGATGCACACTGCAGGGTACTGAGCAGCTAAAAGAAAAGTTGCTGGAGAAGTTTCATGACATTGAGGTATAAGCTTCCCCTCACTTTCTTCTATGAAGTTCAACGAAAAAAAAAAAACTCATTCTCGTGGTATTAATTGTTGCCTGAAAATATGGTACCTGGACCTGAAAAAGGAATGCAGAACATTATTTTCCTAACCAGTACTTGCCTTGTTCATTGCACTCATAAAAATCTTGTAAGGTCTATTGAATTCCTCAGATAAAAAACAATTGTTTTAGTTTTATTTTGGTTTCGTGTACAGACACAAGCTTGGCCAACATCAAACTCATCGTCACAATCATTGGAAGGTCCGTCAGGTGGAGAGAGTATGCCATCTACCAGTGTGGAAATACCAACAGATGGGACGGATGTTTGGGAGATAGATCTCAAGCTTCTCAAGTTTGGAACCAAGGTTGCTTCTGGATCAAATGGCGATCTGTAAGTTCCATTATCTTTGTCGGGAAGTGAAAACAATATAATTTTACACAACTGGGGATTGAGTGCCATTTGATGCTTTGCTTTCTCAGGTTCCGTGGATCATACTGCAGTCAGGATGTAGCTATTAAAGTAGTGAGACCTGAACGCATTAGTGCAGATATGTACCGTGATTTTGCACAGGAAGTCTACATTATGAGGTTAACTTAATATTTTTTTATTGCTTCTCCCATTTATCGAGCATTTTCTAGTGTTTAGCATTTGGCAAATCATATGCATATTGACTTTATTGACTGTACCAAATTGTTTCTTACAAAATCTACATGCTTGCAGAAAGGTCCGCCATAGAAATGTTGTACAGTTTATCGGTGCCTGTACAAGACAGCCCAACTTATATATTGTAACAGGTATATTACAACGGTTTAACTTATAATCTTTGTAGACAAACTTCTGTAGTGTTTGACACACTCTAATTTGCATTCATTTTCTTAGATTTCATGTCAGGAGGTAGTCTGCATGATTACCTTCATAAAAAGAACAATTCTTTCAAGCTATCCGAAATACTGAGAGTGGCGACAGATATCTCTAAAGGAATGAACTATCTGCATCAGAACAACATAATTCACCGTGATCTCAAGACAGCGAATCTTCTTATGGATGAAAACAAGGCTAGTTTTTTCTCATCCATAATCTCATCCATAATGCTATATGATTTACAGAGTGTGCAGAGTGATATTTGCTCCTGTCATTGAACTTCTAAATGAGAGCGATCATATTTTTCAGGTCGTAAAGGTTGCAGATTTTGGTGTTGCACGTGTCAAAGATCAATCCGGAGTGATGACTGCAGAGACTGGAACTTATCGTTGGATGGCACCTGAGGTGCCTGTTATACATACGCTCATTCCATAAGAATAACAACAGCATTTTTGTTTATTCTAACATTTGTATTCTATTGTAACTACAGGTCATTGAACATAAGCCCTATGATCATAAAGCAGATGTTTTTAGCTTTGGTATTGTTCTATGGGAGCTGATAACTGGCAAGGTAACTACAAATTGCTCCAGGAAAAAGTCAATTTCTTTCTTTCTTTTTCCAACTTATATTAATTACATATAAAATTAAACTCACCTAACTATTCAATTTCTCAGATACCCTATGAGTACCTAACACCACTACAAGCAGCCATAGGTGTTGTTCAGAAGGTAAGCAAGCATCCCTGCTTAAATTCTGTAGTTACATGCGTGGTATCCGTAGTATTTAGCTCAAAAATTTAAAATGTTGATGAAACCCATTGTATAGCTATGTCCTGTGGGTGCTGGATTTCTTTAGTTCAAGTGGGGGACATGTGTGATGCTCTAAGGATACAGTAGTTTCGAGAAGCAGTCTTTAAAAAATGATGGCATCCTTGTTCTTTCAAGAAACCATTCTTTTAATATGCGATTGCCTCCCTTTGTGTCCATCCTACTAATCACTCACCTGATTAGAGGTGCAAGTTAGGTTTTCAGGTTACCATGCTCATGGGAATGAGATGAAGTAGAACAAACTTCCGTCAAGTCACGTCATTGTAGCTCCCTCAATTGTAGGGTCACATATAATATCTGCTTAACATCATAGATTCTTACCATTAGCAGAAAGTGCTATGAATTGCATATGAAAATGATTATGAACCTTGATTGTAAATGAAATAGTTGCCGTGATGGAAATTTATTGGCATATTTATCTATATCCTCATATACATGCATATATACGGTATACCTGCTTGATTTCATAAAGTATGGCCTTTTTTTTGGATAAAAGGCCTAAGATAGGAGATGGCCTTTGGTATCTAAAAGAGTTGCAAGACAGCATTTTAACTTGTACATATGTAGCAGAGAGCTGCTAGTTATTTACAACAATTCTACACAAAATTAAGGTTCACTCGTGTATTTTGATCATTTTCTGCAGGGCCTTAGACCAACAATTCCGAAAGATACGCACCCCAAGCTGTCTGAGCTGCTTCAGAAATGCTGGCATAGAGATCCTGCTGAAAGGCCTGACTTCTCCCAGATACTGGAGATTCTTCAGAGACTCCCCAAAGAGGTCAGTTCTAATGCACCTCGACTCATCAATTTATCATGCATTTCTTAAAAATTCTCAAGATTTTGTTCTTTTACAAAAACAGAAACTATTTGCTCAATGAAATTTTAGTTTGTTTCATGTTCAATATCATGCTCCAGAAAAATATATATTAAATTTTGTTTTAATATCCTGATTTAAAAAAACAGGTGAGAGCTGATACCGAGGGTCGCCAGAAATCAAAGGCAGGATTTCTTTCAGCATTGAAGAGAAACCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007234

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA007234&oldid=60786"