BGIOSGA007535

From RiceWiki
Revision as of 03:00, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007535| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007535, complete gene.| tag = P0479D1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA007535

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007535, complete gene.

LocusTag

P0479D12.6

Ensembl Transcript ID

BGIOSGA007535-TA

Ensembl Protein ID

BGIOSGA007535-PA

Length

4651

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3054112..3058762

Sequence Coding Region

3054112..3054521,3055252..3055426,3055504..3055621,3056191..3056306,3056436..3056774
,3056923..3057117,3057315..3057404,3057697..3057747,3058098..3058328
,3058442..3058762

Genome Context

<gbrowseImage1> name=IndicaChromosome02:3054112..3058762 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:3054112..3058762 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATACCCCAGAAAAGAAACCACTGTGCTATACTTCTAGAAGAGCACTGCAACAGAGGACAGAATCCTCTTCGGAATTGATCTCTGTATCAAAAAGAGCAACCCGCCAGAATACTCCACGCAAGCCGGATTCTCCTCCCAAACGAACAACAAGAAGTAGCGCTAACCTGGCGAAATGTATAGAGAACAAACACCATAGCAGTCCTCTGAAGCGGCGGCGGGGTTCAGATGCGGCTACCGGAAAGTCTGCAACAGGGCCAACAAGGAGGAAGCATAAACAGAAAAGGAAAAATGATGAGAGTGATGAGGTCAGTCGCATGGAAAAAAGAGCAAGATATTTACTTATCAAAATAAAACAGGAGCAGAATTTGCTAGATGCATACTCTGGAGATGGTTGGAATGGGCACAGTCGAGAGAAAATAAAGCCAGAGAAGGAGCTACAGCGTGCTAAGAAACAGATCATGAAATACAAAATCGCTATCCGTGACGTCATTCACCAACTTGATTTGTGTAGTTCCAGTGGGAGCAAGGATGACTCTGTGATTCCACCAGATGGGTGTCACGAGTCTGTCAATCCTGAACATACAATATGTTCAAGGTGCAAATCCCACGAGTCATTTCCTGACAATAACATTATATTCTGTGAGGGGGGCTGCAAACTGGCGTGTCATCAGAAATGTTTGGAGCCTCCTTTTGATAAAATTCTTCCAACTACCCGCCATGGGCGGCTTTGCAAACACTGTTCTTCCAAGATGAAAATTTTAGACGCCATTAATGCCCATCTGGGGACAAGTTTTACAGTGAAGTGTCCCTCCAGTGATATTTTCAAGGAAGCAGCTGAACATTTCAACTCTGATGATGGACTGGGCCAAGATTGGCTATCTGAGTATTCAGGTGATGAGGACTATGACCCTGAAGAAAATGAGGCCAGCAGCAGTGGTGAAGAGAATAAATCTGCCGATTCCAATTGTTCAGGGAGTCCACTTTATTCTCCAAATGATGATATTCCAGACTTCATATCAGCAGATTTCAATGATGCTGAAGGATTCTGTCGTGAAAGTTCAAATCTAGGAATCGATTTTGGTGAAGATGGTTTGGCTGAGATTCTTACCCACCAAAGGCCAAGAAGAGATGTTGACTATACACAACTTAATGAGCAAATGTTTGGAGAGCCTATTGGCAATGACGAACAGAGTGAAGATGAAGATTGGGGTCTTAACAAGAGAAAGAAAAGAAGAACTGGTTCAACTGGTGTTGGGACTAATTCCGTAGAGGGTCGATCAGATGTCAAATCCAATAAGAAAGCCCAACCTCGGAGAAAACTTTTCAGGATTCCTCCTGCGGCAGTTGAGGTGCTCCGTAAAGCTTTTGCTGAAAATGAGCTTCCTGCCCGGAGTGTCAAAGAAAATCTCTCAACAGAGCTGGGTATTTCTTTTGAAAAGATTGATAAGTGGTTCAAAAATACACGGTGTGCTGCTCTCAGGGATAGGAAGGGTGAAAGTCGTTATTCTGGTCCCAGCAAAAGGTCAAGAACAAGCATAGAAAAGGCTGAAACTTCAGCTAAAGTGGATCAAATGGACAACTCATGCTTTCTTCCCTTATCTGAAATAATCAACGTGCCCACACGTCTGCAGAAAGGTCTTGATAAGAAGCCAAAATCAATTAACAGCCCTCCAAGACCTCAGGACAATGAAACTTGCTTGTCGCCAACTGATAAAACCAAGGAGGGTACACCGCCTACGATCAAGCCTTCCATCACAGATTCTAGTCAACTGATGAATAACAACATCGGCACTGAGGAGACTGCTGTTTCTTGGGTGGACACTTGGGCCTCTGACGCTCTGCATTTCTTGGACGTGAGCGATGATGAACATTTCTTCGATGTGATCGAGAAGGTGTGCGGTCTCGAGAATCGGCTGCAGCGGTTGAAGGAGAACATGCTATCATCGTCATCGTCAACTGACAACAATGTGGCTGCTGAGAGTGGCTTGCAAAACGAAGTTGTGCTTGTACCAGCTGCTGAGCTCAAGGATAAAGCATCTTAA</cdnaseq>

Protein Sequence

<aaseq>MNTPEKKPLCYTSRRALQQRTESSSELISVSKRATRQNTPRKPDSPPKRTTRSSANLAKCIENKHHSSPLKRRRGSDAATGKSATGPTRRKHKQKRKNDESDEVSRMEKRARYLLIKIKQEQNLLDAYSGDGWNGHSREKIKPEKELQRAKKQIMKYKIAIRDVIHQLDLCSSSGSKDDSVIPPDGCHESVNPEHTICSRCKSHESFPDNNIIFCEGGCKLACHQKCLEPPFDKILPTTRHGRLCKHCSSKMKILDAINAHLGTSFTVKCPSSDIFKEAAEHFNSDDGLGQDWLSEYSGDEDYDPEENEASSSGEENKSADSNCSGSPLYSPNDDIPDFISADFNDAEGFCRESSNLGIDFGEDGLAEILTHQRPRRDVDYTQLNEQMFGEPIGNDEQSEDEDWGLNKRKKRRTGSTGVGTNSVEGRSDVKSNKKAQPRRKLFRIPPAAVEVLRKAFAENELPARSVKENLSTELGISFEKIDKWFKNTRCAALRDRKGESRYSGPSKRSRTSIEKAETSAKVDQMDNSCFLPLSEIINVPTRLQKGLDKKPKSINSPPRPQDNETCLSPTDKTKEGTPPTIKPSITDSSQLMNNNIGTEETAVSWVDTWASDALHFLDVSDDEHFFDVIEKVCGLENRLQRLKENMLSSSSSTDNNVAAESGLQNEVVLVPAAELKDKAS</aaseq>

Gene Sequence

<dnaseqindica>1..410#1141..1315#1393..1510#2080..2195#2325..2663#2812..3006#3204..3293#3586..3636#3987..4217#4331..4651#ATGAATACCCCAGAAAAGAAACCACTGTGCTATACTTCTAGAAGAGCACTGCAACAGAGGACAGAATCCTCTTCGGAATTGATCTCTGTATCAAAAAGAGCAACCCGCCAGAATACTCCACGCAAGCCGGATTCTCCTCCCAAACGAACAACAAGAAGTAGCGCTAACCTGGCGAAATGTATAGAGAACAAACACCATAGCAGTCCTCTGAAGCGGCGGCGGGGTTCAGATGCGGCTACCGGAAAGTCTGCAACAGGGCCAACAAGGAGGAAGCATAAACAGAAAAGGAAAAATGATGAGAGTGATGAGGTCAGTCGCATGGAAAAAAGAGCAAGATATTTACTTATCAAAATAAAACAGGAGCAGAATTTGCTAGATGCATACTCTGGAGATGGTTGGAATGGGCACAGGTATGCACTGCTTCTCTCTTACTGTTGTAAGCTTCTGAGTTTTGACTATAGAAATATTCAAATCCAACTAATCTTACATGCCAAAAGGGGAAAAAGAAACCTGAAATTATTTAATTCATGCTTGCATGATTGTAGTTTTTGACGGAAAACTCAAAAGCAAACCAGATTAAACCTTCTCAGTAACAAAGTTCCATTTTGTTTAGGGCAATAATGAGCAAGGGCTTAGAATGAGGTTTAGAACTACTCATGAAGAGAAAATCATTCACATTTACTGTATGCAAACCAGATGAGAACTTATGTTTTAACCACCAATAGCATCTTAATAATAGGAGGATCAGAATCCATCCCTAGCTCATTGGCTGTGACCAACTCCTCATGGGTCAGAAATAATACTGGTATATGTATCTGTTGGAAGTAATCATTTTGACTTGCGTAGTTGAAGTAGTGTCTTGGGATAGAAGTGCTTTACTGTGGAGGACCTCTCAATCATGATATACACATCTAGTTTGCCTTCTAATTGTTAATTTGTTACTGTCAGTTGTCAATTAGCTATCAAAGAACTGTTCTATAACGGTCTATACTGATGCTCTCAGTAAGCTTCACTTGTGTTGTTTTATATCTAATTCTCTCTCTCTCTCTATATATATATATATATCCTGATGTTGCATAGAATGAAGTAACAGTATGCTATTTATACTATACTTACTAAAGGGTGTGCCTTTCCTAACAGTCGAGAGAAAATAAAGCCAGAGAAGGAGCTACAGCGTGCTAAGAAACAGATCATGAAATACAAAATCGCTATCCGTGACGTCATTCACCAACTTGATTTGTGTAGTTCCAGTGGGAGCAAGGATGACTCTGTGATTCCACCAGATGGGTGTCACGAGTCTGTCAATCCTGAACATGTATGTATGTCATCAAGTGAATATCAAACTCCCTACTTCCATAGGATTATATATTGATACAATGTTCTCTTTTCTAGACAATATGTTCAAGGTGCAAATCCCACGAGTCATTTCCTGACAATAACATTATATTCTGTGAGGGGGGCTGCAAACTGGCGTGTCATCAGAAATGTTTGGAGCCTCCTTTTGATAAAAGTGGGTAATCATTTCTCTTAACTTCTTTCAAAATATGAGGTTCCACCTTTTTGGTAAATGAATGTAGTTTTGTTTAGTGTCAATTTTTTAATATATATTTCTACTTTATGTAGTGACCAGTGCAGTGTACGAACTCAACCATAATCTGAACTTTCCAATTTCCTCAAAAATAAACTGAACTTAGCACTCTACTATGTTATGTTGTGGTCCAACACTTCAAAATAAATGTAGGACATCTCTAGTGTGTAGAGTCTAGACTCTGCTGTCACTCCATGCATAACTTGTCTTCTACTTTTTAGCATGTGATGATTCTTTAGCATGAATAAACATTTATATGCCTTTTTAAAGAAATGAAAGTATGGCATGAGTTCCTATAAAATAATGTATGTTTTAAGTTATTGCTTCAGAATAATGTAATGTGGTGTGCTGTACCAAACATCATAGTGTACCTTCTATTCTGATGATTATGCATCCATGTCACCTGCTGCAGTTGCTCCACCTGATATGTTGCTGCAATGGCTACTTTACAGTTTGTGATGTATCTAACTTTGTTTTGTGGTATCTCTCAGTTCTTCCAACTACCCGCCATGGGCGGCTTTGCAAACACTGTTCTTCCAAGATGAAAATTTTAGACGCCATTAATGCCCATCTGGGGACAAGTTTTACAGTGAAGTGTCCCTCCAGTGTAAGTTTTTTTGTTCTTTACGTTCAAGTTTTGATCACCTTTTAGTTCTTTACGTTCATGTTTTGATCACCTTTTACTCAAGTGGTTTAATTGTGTTGAATAAGCCTTGATTCTGCTTGCTTTCTATAGGATATTTTCAAGGAAGCAGCTGAACATTTCAACTCTGATGATGGACTGGGCCAAGATTGGCTATCTGAGTATTCAGGTGATGAGGACTATGACCCTGAAGAAAATGAGGCCAGCAGCAGTGGTGAAGAGAATAAATCTGCCGATTCCAATTGTTCAGGGAGTCCACTTTATTCTCCAAATGATGATATTCCAGACTTCATATCAGCAGATTTCAATGATGCTGAAGGATTCTGTCGTGAAAGTTCAAATCTAGGAATCGATTTTGGTGAAGATGGTTTGGCTGAGATTCTTACCCACCAAAGGCCAAGAAGAGATGTTGACTATACACAACTTAATGAGGTGTGCTTTATCAACAGGAAATTGTATTCTATGAATAGCGGAGTTTAAATAGATGTGTCTGTTATTAACTGTGAATACTGTATTAGTAAGTTCCTTTTCATCACTAAGATGGATCAACGCTATTATGACCACTTCTCTCCATTCACAGCAAATGTTTGGAGAGCCTATTGGCAATGACGAACAGAGTGAAGATGAAGATTGGGGTCTTAACAAGAGAAAGAAAAGAAGAACTGGTTCAACTGGTGTTGGGACTAATTCCGTAGAGGGTCGATCAGATGTCAAATCCAATAAGAAAGCCCAACCTCGGAGAAAACTTTTCAGGATTCCTCCTGCGGCAGTTGAGGTAACTTGGAATGTTTATTATCTCAAAAAACATATTATCAGCATTACATCTTAATTCTATGATCGCGTATTTGCTGTAACACAAAACAGAAAGTCAATTGATGGTGAAATTCACTGATCTACTGTGCCTGTAGCTGTGACCGTGTGTTTTTTTCAGGACACTTGCTTAATGCCTCGTATTATTCTCTGTTAAATTAGGTGCTCCGTAAAGCTTTTGCTGAAAATGAGCTTCCTGCCCGGAGTGTCAAAGAAAATCTCTCAACAGAGCTGGGTATTTCTTTTGAAAAGGTTTGTTGTGTTGTGTTGAATAATTTATTTCTTACATATGTTAATTCACCTGGATATTTTGTTTTGCTAGTCAATTTTTGGCAGCACTCACCAGATCATACTCCGAAGTTCAATTTTCAAAATACAGCAAACAATGTGTATGACTTTTAAGTTCAGATGTATATTTTGTAGTTGATCACCTTTTCCTTCTAATGTGATGGGTTCATCTTTGAAGTATAGAAGTATTACCAAGTTTGTCTTTGCGGAATCAATGAACTCATTGACCAATGACAAATGTCTGATCTCTTTGCAGATTGATAAGTGGTTCAAAAATACACGGTGTGCTGCTCTCAGGGATAGGAAGGCATGCATTTCTTATCTCACATTTATTCATATAATCTGAATATTTGTTTTCTTGCATCCGCATGCCCCCAAATGTTCCCTCTGGGTTTATCTATACATTCCATGTGCCCATGCAAACATTTGAATATGTTGCCTGTAAAAAATTGAAGTCCTAAAAATGTATTAGTAGATTCATTATGTATGATAGTTACTCTGAGTTTGATGCATGATATTCATCGACTGAAATTTTGTCTTTCATGCATTACATTCCTTCACTATGGCAACTTTACAATCTGTTATTTTTAAGTTCCTGGCAACATCTCACATAGTGCCCAGGGTTTTCGTAAGTTAACCGTTGGCATTGTCTTTCAGGGTGAAAGTCGTTATTCTGGTCCCAGCAAAAGGTCAAGAACAAGCATAGAAAAGGCTGAAACTTCAGCTAAAGTGGATCAAATGGACAACTCATGCTTTCTTCCCTTATCTGAAATAATCAACGTGCCCACACGTCTGCAGAAAGGTCTTGATAAGAAGCCAAAATCAATTAACAGCCCTCCAAGACCTCAGGACAATGAAACTTGCTTGTCGCCAACTGATAAAACCAAGGTATAAACAGCAAGCGCTGATAAGGGCTTCCACCTGAAATAGTTTACTCCTTTTGAATCCACCCAGTTAATTGTGTGGTCTTAACTTGTCTGCTTAACTTGTCTTGTTTGCAGGAGGGTACACCGCCTACGATCAAGCCTTCCATCACAGATTCTAGTCAACTGATGAATAACAACATCGGCACTGAGGAGACTGCTGTTTCTTGGGTGGACACTTGGGCCTCTGACGCTCTGCATTTCTTGGACGTGAGCGATGATGAACATTTCTTCGATGTGATCGAGAAGGTGTGCGGTCTCGAGAATCGGCTGCAGCGGTTGAAGGAGAACATGCTATCATCGTCATCGTCAACTGACAACAATGTGGCTGCTGAGAGTGGCTTGCAAAACGAAGTTGTGCTTGTACCAGCTGCTGAGCTCAAGGATAAAGCATCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007535