BGIOSGA007786

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Revision as of 03:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA007786| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA007786, complete gene.| tag = OsI_063...")
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Gene Name

BGIOSGA007786

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA007786, complete gene.

LocusTag

OsI_06370

Ensembl Transcript ID

BGIOSGA007786-TA

Ensembl Protein ID

BGIOSGA007786-PA

Length

3754

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7440258..7444011

Sequence Coding Region

7440258..7442933,7442967..7443303,7443569..7444011

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7440258..7444011 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7440258..7444011 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGCTCCATACCCATGAGCTTCTCTTGCTCGCCATCGTCTTCCTTTCGTGCTTCTTTAGCCATGTGTCGCCGGCCTTACTTTCTTCATCCACCATCGACCGCCTCGCGCTCATGTCATTCAGGTCGCTCATAAGGAGTGACCCGACGCAGGCACTCGCATCCTGGGGCAACCAGTCCGTACCGATGTGCCAATGGTACAGAGTGGCGTGTGGCCTGAGAGGACGCCGTCGTGGCCGTGTGGTGGCGCTGGACCTCGCCAACCTCAACCTTCTTGGTATGATCAGCCCTGCATTGGGCAACCTCACATACATGAGGCGGCTCTATCTTCCACGGAACAGCTTCCATGGGGAGCTGCCACCAGAGCTTGGTAATCTCCGTGACCTGAAAACCCTGCACCTTGAATACAACTCCATCGGAGGGGAGATCCCACCATCACTCTCCAACTGCGGCCAGCTAGTGCAGATTGCACTCAGCAACAACAAGCTGCATGGGGGGATACCGAGTGAATTGAGCTCGTTGCATAATCTCGAGGTACTTGATCTCAGTGAAAATAGACTTACAGGAAGCATCCCTTCTGATATTGGTAATCTTGTCAATCTGAGAGTGCTCGGCATGCATTTGAACAATCTTACAGGAGAAATCCCACCGGAAATAGGCAAGCTCATCAATCTGGGTGGGTTAAACCTATTCTCAAATCAGCTCTCAGGGTCTATTCCTGTTTCACTAGGAAACCTCTCGGCATTGACCTTTCTTGCTCTCTCCTTCAATAAGTTGACTGGAAGCATCCCACCACTCCAAGGATTGTCATCTCTTAAAACCCTAGGATTAGGACCGAACAACCTGAAAGGAAGCATCCCAACTTGGTTAGGAAACCTCTCATCATTACAAGTAATAGAACTTCAGGAAAGTAATTTAGAGGGAAACATACCAGAATCACTAGGGAACCTCAAGTGGCTCACAGACCTGTTTCTGTTACACAACAATCTTAGAGGTCCTGTGCCCAATACTATCGGAAATTTACATTCCCTTGAAACACTTTCCGTAGAATATAATGAGCTAGAAGGTCCTTTACCTCCTTCAATATTCAATCTTTCTTCCCTTCAAACTCTTGGCATACAGTTCAACCGCCTGAATGGATCATTTCCGGTCGACATAGGCAATACCCTTCCCAACCTTCAATCATTCCTAGCTGACGAAAATCAGTTTCATGGCATAATCCCACCCTCCCTGTGCAATGCTTCTATGATGCAAATGATCCAAGCACAGAATAATATTCTATCTGGAACAATTCCCCAGTGTCTAGGAATCCATCAAAAGAGCTTATATTCTGTAGCTTTTGCACAGAATCAGCTTGAAACAAGAAATGACTATGATTGGGGCTTCATGTCTAGTCTAACTAACTGCAGCAATTTGCGACTGTTAGATCTGGGTGACAACAAGCTTAGAGGTGAGTTACCAAATACAGTTGGCAATCTTTCCACGCGTCTTGAGTATTTTATCACTGGCCATAACAGTATAACTGGAAAAATACCTGAAGGGATAGGGAATCTGGTTGGCCTGAAGTTCATTGAGATGAACAATAACTTACATGAGGGAACTATTCCAGCCGCTCTTGGCAAACTCAAGAATCTGAATAAACTATATCTCACTAACAACAAACTTTCAGGATCCATCCCATCGAGTATTGGCAACCTTCGATTGCTAATTGTACTAGCTCTTGGAGGCAATGCACTCAGTGGAGAAATACCCCCTAGTCTCAGCAATTGTCCTTTGGAACAATTGGAACTATCATACAACAATCTGACTGGTTTGATTCCTAAAGAACTTTTCTCCATCTCTACCTTGTCTGCTTCCGTGAATTTAGAACATAATTTTTTAACCGGGCCTTTGCCCTCTGAAGTGGGTAATCTAACAAATCTTGCATTACTTGATTTATCTAAAAATCGGATTTCTGGAGAGATCCCATCCTCCATTGGTGAGTGCCAAAGTTTACAGTATCTCAATACATCTGGAAACTTACTCCAAGGGAAAATACCACCATCACTAGATCAACTAAAGGGCCTCCTGGTACTTGATCTTTCCCACAATAATTTATCCGGAAGCATCCCTAAGTTCCTTGGGACCATGACAGGGCTTGCTAGTTTGAATCTTTCATTCAACAACTTTGAGGGTGATGTCCCAAAAGATGGAATCTTTAGCAATGCAACTCCTGCTTTAATTGAGGGAAATATTGGCCTATGTAATGGAATCCCTCAACTGAAGTTACCACCCTGCTCTCATCAGACAACAAAACGCAAGAAGAAAACATGGAAAGTTGCCATGACAATCTCTATATGCAGCACAGTTCTATTTATGGCAGTAGTAGCCACATCTTTCGTGCTCCACAAACGGGCCAAGAAGACAAATGCAAACCGACAAACATCACTTATCAAAGAGCAGCATATGAGAGTTTCTTACACTGAATTGGCTGAAGCAACAAATGGTTTTGCTTCTGAGAACCTCATTGGAGCAGGGAGCTTCGGCTCTGTGTACAAGGGAAGTATGAGAATCAATGACCAACAAGTAGCTGTTGCTGTGAAAGTGTTCAACCTCAAGCAGCGTGGTTCATCTAAGAGTTTTGCTGCAGAATGTGAGACTTTAAGATGTGTTCGACATCGGAACCTTGTAAAGGGCCGTGATTTCAAGGCCATTGTATACAAGTTCCTACCAAATAGAAATTTAGATCAATGGCTACACCAAAATATCATGGAAAATGGTGAACATAAGGCACTAGATCTCATCACGCGACTAGAAATCGCAATTGATGTAGCATCCTCACTTGAATATCTTCACCAATATAAGCCATCGCCAATCATTCACTGTGATCTTAAGCCAAGCAATGTTCTCCTCGACGATGAAATGGTTGCACATGTTGGTGACTTTGGCCTTGCAAGATTTCTTCACCAGGACCCAGAGCAATCAAGTGGTTGGGCATCAATGAGAGGCACAATTGGCTATGCTGCTCCAGAGTATGGACTGGGCAACGAAGTCTCAATCTATGGCGATGTATATAGCTATGGTATATTGTTGCTGGAGATGTTTAGCGGGAAGAGACCAACAGACAGTAAATTTGGAGAATCCCTTGGCCTCCATAAGTATGTCAATATGGCGTTGCCAGACAGGGTGGCTAGTGTCATAGACCTTAGCTTACTAGAAGAGACAGAGGATGGCGAAGCAAGGACATCAATATCTAACCAGACAAGAGAAATGAGAATTGCTTGCATTACCTCAATTCTGCATGTTGGAGTTTCCTGTTCAGTGGAGACACCAACAGATCGTGTGCCAATTGGAGATGCCCTGAAAGAGCTGCAAAGAATAAGAGAAGTTCCACAGGGAGTTGCAAGGAGCAGGAGCGACAATCCATCAAGGCATTCAAATCTGTTGATGCGCAGCAACCAGCCGTGCCAATAA</cdnaseq>

Protein Sequence

<aaseq>MAMLHTHELLLLAIVFLSCFFSHVSPALLSSSTIDRLALMSFRSLIRSDPTQALASWGNQSVPMCQWYRVACGLRGRRRGRVVALDLANLNLLGMISPALGNLTYMRRLYLPRNSFHGELPPELGNLRDLKTLHLEYNSIGGEIPPSLSNCGQLVQIALSNNKLHGGIPSELSSLHNLEVLDLSENRLTGSIPSDIGNLVNLRVLGMHLNNLTGEIPPEIGKLINLGGLNLFSNQLSGSIPVSLGNLSALTFLALSFNKLTGSIPPLQGLSSLKTLGLGPNNLKGSIPTWLGNLSSLQVIELQESNLEGNIPESLGNLKWLTDLFLLHNNLRGPVPNTIGNLHSLETLSVEYNELEGPLPPSIFNLSSLQTLGIQFNRLNGSFPVDIGNTLPNLQSFLADENQFHGIIPPSLCNASMMQMIQAQNNILSGTIPQCLGIHQKSLYSVAFAQNQLETRNDYDWGFMSSLTNCSNLRLLDLGDNKLRGELPNTVGNLSTRLEYFITGHNSITGKIPEGIGNLVGLKFIEMNNNLHEGTIPAALGKLKNLNKLYLTNNKLSGSIPSSIGNLRLLIVLALGGNALSGEIPPSLSNCPLEQLELSYNNLTGLIPKELFSISTLSASVNLEHNFLTGPLPSEVGNLTNLALLDLSKNRISGEIPSSIGECQSLQYLNTSGNLLQGKIPPSLDQLKGLLVLDLSHNNLSGSIPKFLGTMTGLASLNLSFNNFEGDVPKDGIFSNATPALIEGNIGLCNGIPQLKLPPCSHQTTKRKKKTWKVAMTISICSTVLFMAVVATSFVLHKRAKKTNANRQTSLIKEQHMRVSYTELAEATNGFASENLIGAGSFGSVYKGSMRINDQQVAVAVKVFNLKQRGSSKSFAAECETLRCVRHRNLVKGRDFKAIVYKFLPNRNLDQWLHQNIMENGEHKALDLITRLEIAIDVASSLEYLHQYKPSPIIHCDLKPSNVLLDDEMVAHVGDFGLARFLHQDPEQSSGWASMRGTIGYAAPEYGLGNEVSIYGDVYSYGILLLEMFSGKRPTDSKFGESLGLHKYVNMALPDRVASVIDLSLLEETEDGEARTSISNQTREMRIACITSILHVGVSCSVETPTDRVPIGDALKELQRIREVPQGVARSRSDNPSRHSNLLMRSNQPCQ</aaseq>

Gene Sequence

<dnaseqindica>1..2676#2710..3046#3312..3754#ATGGCGATGCTCCATACCCATGAGCTTCTCTTGCTCGCCATCGTCTTCCTTTCGTGCTTCTTTAGCCATGTGTCGCCGGCCTTACTTTCTTCATCCACCATCGACCGCCTCGCGCTCATGTCATTCAGGTCGCTCATAAGGAGTGACCCGACGCAGGCACTCGCATCCTGGGGCAACCAGTCCGTACCGATGTGCCAATGGTACAGAGTGGCGTGTGGCCTGAGAGGACGCCGTCGTGGCCGTGTGGTGGCGCTGGACCTCGCCAACCTCAACCTTCTTGGTATGATCAGCCCTGCATTGGGCAACCTCACATACATGAGGCGGCTCTATCTTCCACGGAACAGCTTCCATGGGGAGCTGCCACCAGAGCTTGGTAATCTCCGTGACCTGAAAACCCTGCACCTTGAATACAACTCCATCGGAGGGGAGATCCCACCATCACTCTCCAACTGCGGCCAGCTAGTGCAGATTGCACTCAGCAACAACAAGCTGCATGGGGGGATACCGAGTGAATTGAGCTCGTTGCATAATCTCGAGGTACTTGATCTCAGTGAAAATAGACTTACAGGAAGCATCCCTTCTGATATTGGTAATCTTGTCAATCTGAGAGTGCTCGGCATGCATTTGAACAATCTTACAGGAGAAATCCCACCGGAAATAGGCAAGCTCATCAATCTGGGTGGGTTAAACCTATTCTCAAATCAGCTCTCAGGGTCTATTCCTGTTTCACTAGGAAACCTCTCGGCATTGACCTTTCTTGCTCTCTCCTTCAATAAGTTGACTGGAAGCATCCCACCACTCCAAGGATTGTCATCTCTTAAAACCCTAGGATTAGGACCGAACAACCTGAAAGGAAGCATCCCAACTTGGTTAGGAAACCTCTCATCATTACAAGTAATAGAACTTCAGGAAAGTAATTTAGAGGGAAACATACCAGAATCACTAGGGAACCTCAAGTGGCTCACAGACCTGTTTCTGTTACACAACAATCTTAGAGGTCCTGTGCCCAATACTATCGGAAATTTACATTCCCTTGAAACACTTTCCGTAGAATATAATGAGCTAGAAGGTCCTTTACCTCCTTCAATATTCAATCTTTCTTCCCTTCAAACTCTTGGCATACAGTTCAACCGCCTGAATGGATCATTTCCGGTCGACATAGGCAATACCCTTCCCAACCTTCAATCATTCCTAGCTGACGAAAATCAGTTTCATGGCATAATCCCACCCTCCCTGTGCAATGCTTCTATGATGCAAATGATCCAAGCACAGAATAATATTCTATCTGGAACAATTCCCCAGTGTCTAGGAATCCATCAAAAGAGCTTATATTCTGTAGCTTTTGCACAGAATCAGCTTGAAACAAGAAATGACTATGATTGGGGCTTCATGTCTAGTCTAACTAACTGCAGCAATTTGCGACTGTTAGATCTGGGTGACAACAAGCTTAGAGGTGAGTTACCAAATACAGTTGGCAATCTTTCCACGCGTCTTGAGTATTTTATCACTGGCCATAACAGTATAACTGGAAAAATACCTGAAGGGATAGGGAATCTGGTTGGCCTGAAGTTCATTGAGATGAACAATAACTTACATGAGGGAACTATTCCAGCCGCTCTTGGCAAACTCAAGAATCTGAATAAACTATATCTCACTAACAACAAACTTTCAGGATCCATCCCATCGAGTATTGGCAACCTTCGATTGCTAATTGTACTAGCTCTTGGAGGCAATGCACTCAGTGGAGAAATACCCCCTAGTCTCAGCAATTGTCCTTTGGAACAATTGGAACTATCATACAACAATCTGACTGGTTTGATTCCTAAAGAACTTTTCTCCATCTCTACCTTGTCTGCTTCCGTGAATTTAGAACATAATTTTTTAACCGGGCCTTTGCCCTCTGAAGTGGGTAATCTAACAAATCTTGCATTACTTGATTTATCTAAAAATCGGATTTCTGGAGAGATCCCATCCTCCATTGGTGAGTGCCAAAGTTTACAGTATCTCAATACATCTGGAAACTTACTCCAAGGGAAAATACCACCATCACTAGATCAACTAAAGGGCCTCCTGGTACTTGATCTTTCCCACAATAATTTATCCGGAAGCATCCCTAAGTTCCTTGGGACCATGACAGGGCTTGCTAGTTTGAATCTTTCATTCAACAACTTTGAGGGTGATGTCCCAAAAGATGGAATCTTTAGCAATGCAACTCCTGCTTTAATTGAGGGAAATATTGGCCTATGTAATGGAATCCCTCAACTGAAGTTACCACCCTGCTCTCATCAGACAACAAAACGCAAGAAGAAAACATGGAAAGTTGCCATGACAATCTCTATATGCAGCACAGTTCTATTTATGGCAGTAGTAGCCACATCTTTCGTGCTCCACAAACGGGCCAAGAAGACAAATGCAAACCGACAAACATCACTTATCAAAGAGCAGCATATGAGAGTTTCTTACACTGAATTGGCTGAAGCAACAAATGGTTTTGCTTCTGAGAACCTCATTGGAGCAGGGAGCTTCGGCTCTGTGTACAAGGGAAGTATGAGAATCAATGACCAACAAGTAGCTGTTGCTGTGAAAGTGTTCAACCTCAAGCAGCGTGGTTCATCTAAGAGTTTTGCTGCAGAATGTGAGACTTTAAGATGTGTTCGACATCGGAACCTTGTAAAGGTACTGACAGTATGCTCAAGTATCGATTTTCAGGGCCGTGATTTCAAGGCCATTGTATACAAGTTCCTACCAAATAGAAATTTAGATCAATGGCTACACCAAAATATCATGGAAAATGGTGAACATAAGGCACTAGATCTCATCACGCGACTAGAAATCGCAATTGATGTAGCATCCTCACTTGAATATCTTCACCAATATAAGCCATCGCCAATCATTCACTGTGATCTTAAGCCAAGCAATGTTCTCCTCGACGATGAAATGGTTGCACATGTTGGTGACTTTGGCCTTGCAAGATTTCTTCACCAGGACCCAGAGCAATCAAGTGGTTGGGCATCAATGAGAGGCACAATTGGCTATGCTGCTCCAGGTAAGCTCCTAATTGCTGTAGCTTTTTATCATAATATATATTATATATATCCTACTATGCTGGATTCAGACAAAGTGAAGTAAGACTTATCGGTACTTCATTTTACTGCATAGACAAGTTTTGATGAAACTCCTATTTCCCTAGGGATTTGAAAGGGAAAAAAATGAGCTAGTATATGGTAGAAAAATATTGTATCCTGTAAATGGATTTCGCACATACATAGGCTTGTGGAGTTATTTTCTCATAATCCATTTCTTATTTTTAGAGTATGGACTGGGCAACGAAGTCTCAATCTATGGCGATGTATATAGCTATGGTATATTGTTGCTGGAGATGTTTAGCGGGAAGAGACCAACAGACAGTAAATTTGGAGAATCCCTTGGCCTCCATAAGTATGTCAATATGGCGTTGCCAGACAGGGTGGCTAGTGTCATAGACCTTAGCTTACTAGAAGAGACAGAGGATGGCGAAGCAAGGACATCAATATCTAACCAGACAAGAGAAATGAGAATTGCTTGCATTACCTCAATTCTGCATGTTGGAGTTTCCTGTTCAGTGGAGACACCAACAGATCGTGTGCCAATTGGAGATGCCCTGAAAGAGCTGCAAAGAATAAGAGAAGTTCCACAGGGAGTTGCAAGGAGCAGGAGCGACAATCCATCAAGGCATTCAAATCTGTTGATGCGCAGCAACCAGCCGTGCCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA007786