BGIOSGA008039

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Revision as of 03:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008039| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008039, complete gene.| tag = OsI_069...")
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Gene Name

BGIOSGA008039

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008039, complete gene.

LocusTag

OsI_06901

Ensembl Transcript ID

BGIOSGA008039-TA

Ensembl Protein ID

BGIOSGA008039-PA

Length

6100

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12832947..12839046

Sequence Coding Region

12832947..12833165,12836359..12836859,12838704..12838729,12838815..12839046

Genome Context

<gbrowseImage1> name=IndicaChromosome02:12832947..12839046 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:12832947..12839046 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGGTCGTGCAGGACGCCACCGCTGCCGTGGAGCAGGTCGACGCTGGCGCCGTGGTGGTGAAGCTCGCACAACAGGTGGACGGCGCCGCCGTTGTGGTTGACGCTGCCGGCGTTGTGCATGAGTGCAAAAATAAGTGGACACCAAGAATCGAACTCAGAACTAGTAGCTTCAGTTTTGCATGCGATGGCCACTCAAACCAAGAGCAGGTTGTGCCGAGCCTCCCCCGGTGCGACGACGGCGAGGGAGATGGTCCCGTGGAGCTCCGCACCCCGACGCTCTTCTCCATCGACGAGAACCCCACCCCGCTGCAGACCGCCACCAGCGTCCTCCTCACCGGCGCCATCTCCGTCTTCCTCTTCCGCTCCATCCGCCGCCGCGCCCGCCGCGCCAAGGAGCTCGTAATCCCCTCCCTCCTCATCCACCTGCGCTGCGCTTTCTCGACTGGAGAACACACATGGTCTACAAATCCTATTAGCTTCCGTGACACAGAGGGTCGGTCCGGCGGGGTGGAGAAGCCCAACAACCTGAGCAAGGAGGCCCTGGAGGGGCTGAGGCTGGTGAGCGCGTCGCCGATCGAGGTCGACAAGCCGCCGTCGCCCGTGCAGGCGCTGCTCGGCGGGATCGCCGCGGGGGTCATCGCGCTCATCCTCTACAAGTTCACCACCACCATCGAGGCCGCGCTCAACCGCCAGACCATCTCCGACAGCTTCTCGGTTCGTCAAATAACAATAACAATAAGAACAATTATAAATGGGATATGCTACCTAGCAACATTTGTGTTTGGAATCAACTCAATTGGATTAGTACTCTATGGTCTCCAGCTCACTTTTGCTTCTATCATGGGCGATGACAATTCCAGCAGCGCTGCAGAGAAAATCAGTGAGCAGTCCAACACAATGGCATCATCTAATAGCTCCACAGATTCAACAAGTGACAACGAATCAACTAGCAATGATAAGAGTAAAGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MEQVVQDATAAVEQVDAGAVVVKLAQQVDGAAVVVDAAGVVHECKNKWTPRIELRTSSFSFACDGHSNQEQVVPSLPRCDDGEGDGPVELRTPTLFSIDENPTPLQTATSVLLTGAISVFLFRSIRRRARRAKELVIPSLLIHLRCAFSTGEHTWSTNPISFRDTEGRSGGVEKPNNLSKEALEGLRLVSASPIEVDKPPSPVQALLGGIAAGVIALILYKFTTTIEAALNRQTISDSFSVRQITITIRTIINGICYLATFVFGINSIGLVLYGLQLTFASIMGDDNSSSAAEKISEQSNTMASSNSSTDSTSDNESTSNDKSKG</aaseq>

Gene Sequence

<dnaseqindica>1..219#3413..3913#5758..5783#5869..6100#ATGGAGCAGGTCGTGCAGGACGCCACCGCTGCCGTGGAGCAGGTCGACGCTGGCGCCGTGGTGGTGAAGCTCGCACAACAGGTGGACGGCGCCGCCGTTGTGGTTGACGCTGCCGGCGTTGTGCATGAGTGCAAAAATAAGTGGACACCAAGAATCGAACTCAGAACTAGTAGCTTCAGTTTTGCATGCGATGGCCACTCAAACCAAGAGCAGGTTGTGGTTTGGTGTACCTCGAAACCGTATTTGTTAGGGGTAAAACAGGAAGTAGGAACACTAATTAATCACTCATTGGTATGTGTAATCCTGTCTAAAACGTCAACAAATTAGGAACTGAAGGGGGTAGGAGGTTAGAGGTAGCAGCGAGGCGTGATTCGGCCTTGTTTTGTTCCCAAAACAAAAATTTTCACGCTATCACATCGAATGTTTGGATACATATATGGAGTATTAAATGTAGGAAAAAAACAATTACAAAGATTGTATGTAAAATGCGAGACAAATCTTTTAAGTCTAATTGCGCTATGATTTGACAATGTGGTTCTACAGTAAACATTTGCTAATGACGGATTAATTAGGCTTAATAAATTCGTCCCGCAGTTTTCTGGCGGAGTCTGTAATTTGTTTTGTTATTAGACTATATTTAATACTTCAAATGTGTTTCCGTATATCCGATGTGACAACCAAACCCAAAATTTTTTCCCCAACTAAACCAGGACTCATTCTTCGAAATTGCTAATTAGCGCGTATGCGCTATTAGCACAAGCGGCGCGAGTTCTGGCCCACCCCACGCGCGTCCCATCTCTTCCTTTTTTTTCCTTTTTTTCTCGCTTCTTTTTTTTCCGCCGCGCCGTGAAATGTTTTTTTGCCGATTTTTTTTGTGATCTTTTTATTTTAGAAATTGAATCTTTCATCTTTAATTGCTGCTGAAAATTTTGAATTTGAGTTGAAAGTTTTTAAAATTTGAGTTGAAAGTTTTTAAGTTTTGAGATGAAAGTTTTTAAATTTGAGTTGAATGTTTTTGAACCTTAGATGAAAGTTTTAAAATCAGAGTTGAAAGTTTTCAAATCTTAACTTAAATAGCTGAAAGTTTTTAAGATTTGAGAAGAATGTTTTTAAGTTTTTAGATGAAAGTGTTCAAATTTGAGTTGAATGTTTTTGAATCTGAGATGAAAGTTTTTAAATCTGAGTTAAAAGTTTTCAAATCTTTAGTTGAAAGTTTTTAAATTTGAGTTGAAAGTTTCAAATATTGACTTGAAATTTTTCAAATAAAGATTTGAAAGTTTTAAAATAAGAGTTGAAAACTTTTAGACTTAAGTTGAAAGTATTAAAATCTTGGCTTGAAAATTTTGAAATCTAAGTTCAAATCTAGACTTGAAAGTTTTCAAATATTAGTTGAAAAGTTTTCAAATCTTGAATAAATCAAAGTTGAAAGTTTGTTTCAGTTAATTAAACAAAGGGAAGAAACATACGCATTCTTATAAAAAAAAGAAAAAAAAACAGCGCTAAGCGCTCTTAGGGCCGTGAAAGTGCGCGCCGCCTCTGATGCTAGCGCTTAAGCGTGTAACAGGAACCCCCCTCATTCATTTGGTATTTGGGGGCTAGGGTTGCGATGGAGGCTATATGCCTGAAATCTACGAGGCGGATGGTGTGAGGTGGTGATGCGACCACACAGGGGAGTGCCCGAGGCATTAGGCTACCAGCAGAATGCAGGCGCAAGTCACTGGCATGGGCAAGTCAACTGGTTCTAGTCTATTATTGCTACTCTGCTCATCTCGTTCGCTCCTTAGCTAATAACCTTGTGCTAATTAGCTAATGGCCTTGTGCTAACCAATGAGGATTCTGTATTTTTCTCTAGTATCTTGCTAATCAAGAATGCACTTTTATGTTGGCAATGCACTCCTCCGTTTTCTTTTCTATTTGATTATGTTAACATTGAATTCGATGTAGGTAAAGGTACGTACTTTACTTTGCTTTTATTGACTTAGGGTCTGTTCACTTTGGCATAGTTGCCGAAATTTTGATAACTTACCAAAATTTTGACAGCATTTCTTATATAATTACCAAAATTTGAAAATTTGACAGTAAACTAAATGTAGCCAATTTTTTGGCAATTTTACCAAAACTTGGTAAGGTTGAAAATAACATCAAATCAAAGTGAACAGGCTCTTAGACTTAAACTTTGAGCCTATCCTCACTATAGTTTGACTAGATGTCCACCCTAGCAATCTGCTTGAGAGATACTCCATCCGTTTCATAATGTAAGATTTTCTAGTATTACCCATATTCATATAGATGTTAATGAATCTAGACACATATATGTCTAGATTTATTGACATCTATATGAATATGTACAATGCTAGAAAGATTTATATTATGAAACGGAGAAAATAGAATCATGAGGCTTCTTCCACCAATTTGGACTATAGTTTGTAAGGTTGCACATAGATTTTATAATATTTAATTAGATTCCTTGGTACGAAATGAAATTGGTTAGGACATTGTAATACCAATTTGTTGCAGGAGCTAGCCTGACCACCGTCCAAATGCATCTGCAGTTTTATTCCTTACCTCATTGCACGGAGGCAAAGATGCCACGTGGGATAAAACCACCTTCGAAACTGCTCGGAGAGTCGATTTGCAACGGTTTTGAGAGTTGGAGGATAGGTTATACTCGATTTTACTGTTGAGGATGCGATTCAATGAGGGGCATGAGTTGAGGGAGTCAATATAAACTTATTTCTCCAACTTTCCGTCAGTTCCCCGTCCCTTAGCACCCACCCCCACCGTACGCACACCAGGCCACCACCAAGAAACGATGGAGAAGGCATCGGTCCATCAAAGTAGCCCACTACCCATCACACCCGAATTTTTTTCATTTTTAAATTTTTATTTTTAATATTTACAGAAATATTATACCGGCGAAAATATTTACAAGAGTAAACTCAGGATGACGTGAGAGACAGCCGAGATGCAAAAGAAAAATCAGCAAAATGCATTTTTAACATGGCGAAAATTGCATTTAGCCCTTTGTACGAGGGCGGCAAGAGACCTCAATGCAAAATGTGCACACCTGGCCGCTCTTCACTTTGGCGGCAGGGGGGCTATTTCTGTAAATATTTAAATGGTATAATATTTCTGTAAATATTAAAAAATAAAAATTTAGAAATGAAAATAATTCATCACACCCTTTCTCGCCCGACCCGTTCGTTATCCACTGAACTCTCTCCCCGAGCACCGCCAAGCAGCTCTCCACTCCCACCATGCTGCTGCTCCACTCCTCTCCGCGCCTCCTCCTCCGCCACCGCCTCCTCCTCCCCCCGTCCTGTGCACTCCTCCCCGCCGCCTCCGCCTCCGCCCTCCGCCTCCGCCGCTCCGTCGCCGTCCGCGCCGAGCCGGAGCTGTCCACCTCGTGCAGCCGAGCCTCCCCCGGTGCGACGACGGCGAGGGAGATGGTCCCGTGGAGCTCCGCACCCCGACGCTCTTCTCCATCGACGAGAACCCCACCCCGCTGCAGACCGCCACCAGCGTCCTCCTCACCGGCGCCATCTCCGTCTTCCTCTTCCGCTCCATCCGCCGCCGCGCCCGCCGCGCCAAGGAGCTCGTAATCCCCTCCCTCCTCATCCACCTGCGCTGCGCTTTCTCGACTGGAGAACACACATGGTCTACAAATCCTATTAGCTTCCGTGACACAGAGGGTCGGTCCGGCGGGGTGGAGAAGCCCAACAACCTGAGCAAGGAGGCCCTGGAGGGGCTGAGGCTGGTGAGCGCGTCGCCGATCGAGGTCGACAAGCCGCCGTCGCCCGTGCAGGCGCTGCTCGGCGGGATCGCCGCGGGGGTCATCGCGCTCATCCTCTACAAGTTCACCACCACCATCGAGGCCGCGCTCAACCGCCAGACCATCTCCGACAGCTTCTCGGTCAGCTCTCTTCCCCCTCCACAATATTTTAGTATTTTTCTTGTTGCAACAATATACATGTTTTTTTTACAGCACATTAAATTGATTTAGGCTGTTTAGGGCTCCTTTCAAACTAAGGTTTCTTTGAGAAATTTTTTAGAATATGAATATCCTTTTAGGAAGATTTGCCTATGTGCTCCTTTGGAACAAAGGACCGAACCCTTTGAACTTCCATTGGAATTGCCAAATTCATATAAGTTTTGGAGGAAATCTAGCATGAGTAACAGGGATCTTGAGGCTGTGCTGTATGTGTCCGATTGTGTCTGTGATGACAAGTATCTGTGTTGCTTTGATTTTTGTCAGACTTCACTTTATCGGTTAATCCTTTTGTTGTTCCGACAAATAAATGTATAATTGTATATACGCCATTGTTTGGAACTAGTTTGCCATGTCTATGCGCCATTGAACCTATGTGAATAGCTACAAATAAATTTTATGGAGTCGTGGACAATTTAATAAAGGTTGTGAACTAACCACATGGATGATAATTCAATATATCATAGTGGACAATGAATGCTGGTTTACATAAACCATTAAGGCTGTGTTTAGTTCCCTTCAAACTTTCAACTTTTTCGTCACATCAAATGTTTGGACACATGCATGGAACATTAAATGTGGACAAAAAAACACAGCTTGCATGTAAATTGCAAGACGAATCTTTTGAGCCTAATTACGCCATGATTTGACAATGTGGCGCTACAGTAAACATTTGCTGATGATGGATTAATTAGGCTTAATAGATTCGTCTCGTAGTTTACAGGCAGAATCTATAATTTGTTTTTTATTAGTCTACGTTTAATACTTCAAATGTGTGTCCGTATGCGTCAAATTTTTTTGCCAAAACAACTAAACACGGCACAAGTGAAGTTGTGTTAGAGCTATGCAGTTTTCTGGTCAAAGGCTGAAAGTGTAAGTGATAAAGACTTCAACAAAAATAGTTTATTGCAGGCCAAGTTTGCCAATGAAACTTGTGCGGCTATGTTATCTAGGCCGTGTTTAGTTCCAAAATAATTCTTCGAACTTCCAACTTTTCCATCACATCAAAACTTTTCTACACACATAAGCTTCCAACTTTTCCATCACATCGTTCCAATTTCAACCAAACTTCCAATTTTGGTGTGGTGAACAAAACACAGCCCTAGGTCGACACTTCAATTTTCGTAGCAGCTCTGATGAAGTGTGGAGTGTGGACCATAATTCAGTGTGGTAACACTTATTTTGTGGGAATAATTCTATATTCTTGTAAGGATTGCAGATTAGTTTTGAGCAATTTGAACCCCTCTACCTTATGCTGTTTTTGACATTTTTTTGGTTTCAAATGAATTTTCCAACTTGAAGTTTGCTTCATTTGTATTATTACCTGCCATTTTCTTGTTATCCTTCGTTAATGGTCTAGTAGAAGTTAGCGCTACTGCTATGCAATGCTTTGAGTAATTGTCTGCTGTAATCACCATCCATTTTTTTGTCGCCAATGTGCCTTGAAGTTTACAGCAAGGAATTGAATCCCATTTCAATATTATTTCACAAATGGAGAATAAGGCATGGAAAATGCAAATTATTGTTGTGTTTTACCAACACATACAAATTCAACAATGATGCAAGGAACAAATACTAAGAGAGCTGCAACAAAAATTATTTCTTGTTGTCCTCCCGTGGGTCGGTTAACACATTTATGCACCGTAAAATGTGCTATTTCGTGCTACCAACTTTCCATATACTTACAGAGGAACTGAATTTCAGTCTTCGTCATATTTTTTGTAACTAGCACAATTCATCTAATGGAATCCTCCTTTTGTTTTCTGCAGGTTCGTCAAATAACAATAACAATAAGGTACAACTCCATTCATTCACTGTTCTCTTGTTTGTTATATATTGTAATCCTTTTATCTAATGAATGAACCACGTTTTCTCTGCAGAACAATTATAAATGGGATATGCTACCTAGCAACATTTGTGTTTGGAATCAACTCAATTGGATTAGTACTCTATGGTCTCCAGCTCACTTTTGCTTCTATCATGGGCGATGACAATTCCAGCAGCGCTGCAGAGAAAATCAGTGAGCAGTCCAACACAATGGCATCATCTAATAGCTCCACAGATTCAACAAGTGACAACGAATCAACTAGCAATGATAAGAGTAAAGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008039