BGIOSGA008426

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Revision as of 03:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008426| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008426, complete gene.| tag = OsI_076...")
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Gene Name

BGIOSGA008426

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008426, complete gene.

LocusTag

OsI_07654

Ensembl Transcript ID

BGIOSGA008426-TA

Ensembl Protein ID

BGIOSGA008426-PA

Length

5117

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22719205..22724321

Sequence Coding Region

22719205..22719417,22719949..22720070,22720164..22720422,22720536..22720642,22720739..22721546
,22721774..22722211,22722432..22722620,22722699..22722926,22723026..22723259
,22723387..22723462,22723535..22723676,22723832..22724321

Genome Context

<gbrowseImage1> name=IndicaChromosome02:22719205..22724321 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:22719205..22724321 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGTGCCGGAGGCGGTGGCGCTGGAGATACCTGCGGCGGCGGAGGCCGAGGAGGAGGTTGAGGAGGAGGAGGGGTCGCCTTCGCCTCCGGTGGTGGCCAGGGTGCCGCCGCGGATCAGGAGGCGGCTCCTCCTCCGGCACCGCGGGGGAGCGCCGGCCACCGCGGAGGAGATCGAGGCCAAGCTCCGCGATGCGGACCTCCGGAGGCAGCAATTTCATGAAGCGTTATCGTGCAAAGCGAGGTGCACAGTCAGATACCCTTCGTGTCCATCTCAGGAGGAGGATCCTAAGAAGCGCCTTGAAGCAAAGCTTGTGGCTGCCGAGCAGAAAAGGTTAAGCCTCCTGGCTAAGGAACAAAGTCGGCTTGCTAAGTTGGACGAGCTGCGTCAGGCTGCTAAGAATGATGCGGAGTTGAGGTTCAAGAAGGAGAGGGAGGAACTTGGCATGAAAGTTGAATCTAGAGTTCGGCAAGCGGAGGAGAAACGTACACAACTCATGCATGCTCGTTCGCAGAGGAGGGCTGCACTGGAGGAAAGAACAACAAAGTACCTTGTGCAGAGAGTGGCGTGGGAAAACAAGTACAGGGAGCGTGCAAAGCGGCAGAGAGCTGAGTATTTGAAGCAGCGAGGAAGTACTCACAGCTTTACATACACCGCTTCAGTTAAAAACGGTGATTTTCTTTCAAGAAAGCTGGCAAGATGCTGGAGAAGATTCATAACATCTAGGAAGACAACAGTGGTGTTGGCTAGGGCCTTTGACATGCTAAGAATAAATGAGGAATCTGTTAAGCCTATGCCATTTGAAAAACTAGCTCTTTGCATTGAATCTCCCACAGTTCTTCAGACCACAAGGGCATTTCTTGATCGCTTGGAGAGTCGTTTTACTTTATCTCAGTCATCAAGTCCATCATCACCAGAAAATATTGATCATCTGCTCAAGCATCTGGGATCACCAAAGAGGACTCTATCAAAAAGTGGGGGAAGAACTAGAGTGACACCAACAAAGGCAGCTAGAAATTCAGATGTTAGCAAGTTACCTAGATATTCACCGAGGATAGTTCTTTGTGCTTACATGATACTAGGTCACCCGAGTGTTGTTTTTAATGAACGAGGTGAGCGAGAGAAACTACTTGTGGAGTCAGCAGAAAACTTTGTGAAGGAATTCGAACTGCTGATTAAGACAATACTTGATGGGTCAAGTGGTGCGTGCATACTGAAACAGCCAATACTAGATGATCTGTCTCCTGGATCTTCTAATTATCAGGAATCTTCTGCCGTTATTGCTGATCGGAAGAAATTCAGATCTCAGTTGGCTTCTTTTGACAAAGCTTGGTGTGCCTATCTTTACCACTTCGTGGTGTGGAAAGCAAAAGATGCAAAGTCACTAGAGGAAGATCTTGTCAGAGCTGCATGCAAACTTGAGCTATCAATGATGCAAACATGTAAATTTACCGCTGAAGGCCAACCAGAGAACCTTAATGATAATTTAAAGGCCATCCAGAAAGAGGTTATGGTAGACCAGACACTTCTAAGGGAGAAGGTTCGGCACTTGGGTGGTGAAGCTGGTATTGAGCGGATGGAAGTTGCTTTATCAGAAGCAAGGACAAAGTTTTTTGAAGCAAAGGGAAACAGGAGCCCCTTGGCAACAACTATAAAAAATGTAGCAGCTACATGTTCTTCTGGAGAATCTCCTATTTCTGACATGAAGGAGAATTCCAACATTAATGATAAAAGGCCAAGTCAGGCTGACCAATCTATGTTCAGAGTTCCCTCTTCACCATCTGAAAGTAACACAGCAGGCATCACCATGAGTAATCCAATGACAGTGAGCAGCACTCTGTCAGAAAAACGGCCAACAGAGAACGAGCAGATGGTCAATGAGATTCTTCATGGTTTTCTAGCTGACAGCTCTAGTAATATTGGGACTGTTGAGGGTGGTTTCAAGGAAAAAGTAAGGGAAACAATGGAGAAAGCTTTCTGGGATGTGGTTGTGGATTCACTTAGAGGAGACATGCCAGACTACAGCTATCTGGTTCAGCTGGTAAAGGAAGTCAGGGATACATTGTATGAGATGGTTCCTAAAGGTTGGAAAGAAGAAATAATCAACAATATTGACCTTGAAATTTTGTTGCAGGTACTTGAATCGGGCACCCAGGACATGCAATATTTGGGACAGATTTTGCAGTACTCTCTGGGTATGCTGCGAAAACTATCCTCTCTTGCAAAGGAAGACGAAATGAAGAGAAGCCATGACAAATTATTGGGTGAATTAACTGAACACTCTGAGTGTAATAACAGTGGTTCAAATTCATTTGTAATTGCTGTTATCAAAGGTTTGCGCTTCACCATGGAAGAACTAAAGGCTCTGAAGACAGAAGTCAGTAGAGCACGTATCCAACTATTAGAACCAATTATAAAGGGCTCAGGTGGAGTGGAATACCTGCAGAAGGCTTTTGCTGATCGCTATGGATTCCCGTCCAATGCATCAGTTGCTCTCCGTTCAACTGCTCAGTGGATTTCCACATCAAAAGATACCGTGGAAGTAGAATGGAATGAGCATGTCAGCTCTTTTTCAGCTCTGCCAGAAACCGATCATGCTCAGCCACTTGTTGCCACCCTCCGATCAGGTCATGGAGTTCCAGATCAGCGACAGTCTACAATACCTGTGTCAGATGATACGGGGCTACCAGAGTGCACGGGGCAAAGGCTTGACCAGCTAATAAGGATTGGGTTGTTACAGCTCATCAGTGGCATAGAGGGTGTGCAAATGCAGTCAGTAACTGAGACCTTCAAGCTCAATTGGTTGAGGCTGAGCATGCTTGTGCAGCGTCAAGTTTTGGCGACCGACGACCCAAACATCACTCCCACAGAGCTGGAAAGCGCGACATCACAACTGTTCAACACTCTCGCAGAGCTACTGGACAAATTCCCCGACGTTAGCACCGCCAAGATCATGGAGGTGATGCTCCGTTCGTCGTCGTCGTCGTCATCAGGCTCGACAACCGGCTCTCCATCAGATGAAAGAACCGAGAGCAGGAAGCAGATACTGGCCAGGGTCTTCCTCAAGAGCCTCCAGACCGATGACCCCGTCTTCAAGAAGGTCTCCCGGTCCGTCTACTGTGCGTTCCGCGCGATCACCCTCGGTGGCAGCGGTGCCAGGGGACGGAAGCTCGCCGACGCCGCCCTGAGGCGCATCGGCGCGACGAAGCTCACCGACCGGGTGGTGAGATCGGCCGAAATCCTCATCAGGGCCGCGTCCATTTCACAGCAGGTCCACGGCCCTTGGTACAATCACTTGGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MGVPEAVALEIPAAAEAEEEVEEEEGSPSPPVVARVPPRIRRRLLLRHRGGAPATAEEIEAKLRDADLRRQQFHEALSCKARCTVRYPSCPSQEEDPKKRLEAKLVAAEQKRLSLLAKEQSRLAKLDELRQAAKNDAELRFKKEREELGMKVESRVRQAEEKRTQLMHARSQRRAALEERTTKYLVQRVAWENKYRERAKRQRAEYLKQRGSTHSFTYTASVKNGDFLSRKLARCWRRFITSRKTTVVLARAFDMLRINEESVKPMPFEKLALCIESPTVLQTTRAFLDRLESRFTLSQSSSPSSPENIDHLLKHLGSPKRTLSKSGGRTRVTPTKAARNSDVSKLPRYSPRIVLCAYMILGHPSVVFNERGEREKLLVESAENFVKEFELLIKTILDGSSGACILKQPILDDLSPGSSNYQESSAVIADRKKFRSQLASFDKAWCAYLYHFVVWKAKDAKSLEEDLVRAACKLELSMMQTCKFTAEGQPENLNDNLKAIQKEVMVDQTLLREKVRHLGGEAGIERMEVALSEARTKFFEAKGNRSPLATTIKNVAATCSSGESPISDMKENSNINDKRPSQADQSMFRVPSSPSESNTAGITMSNPMTVSSTLSEKRPTENEQMVNEILHGFLADSSSNIGTVEGGFKEKVRETMEKAFWDVVVDSLRGDMPDYSYLVQLVKEVRDTLYEMVPKGWKEEIINNIDLEILLQVLESGTQDMQYLGQILQYSLGMLRKLSSLAKEDEMKRSHDKLLGELTEHSECNNSGSNSFVIAVIKGLRFTMEELKALKTEVSRARIQLLEPIIKGSGGVEYLQKAFADRYGFPSNASVALRSTAQWISTSKDTVEVEWNEHVSSFSALPETDHAQPLVATLRSGHGVPDQRQSTIPVSDDTGLPECTGQRLDQLIRIGLLQLISGIEGVQMQSVTETFKLNWLRLSMLVQRQVLATDDPNITPTELESATSQLFNTLAELLDKFPDVSTAKIMEVMLRSSSSSSSGSTTGSPSDERTESRKQILARVFLKSLQTDDPVFKKVSRSVYCAFRAITLGGSGARGRKLADAALRRIGATKLTDRVVRSAEILIRAASISQQVHGPWYNHLV</aaseq>

Gene Sequence

<dnaseqindica>1..213#745..866#960..1218#1332..1438#1535..2342#2570..3007#3228..3416#3495..3722#3822..4055#4183..4258#4331..4472#4628..5117#ATGGGGGTGCCGGAGGCGGTGGCGCTGGAGATACCTGCGGCGGCGGAGGCCGAGGAGGAGGTTGAGGAGGAGGAGGGGTCGCCTTCGCCTCCGGTGGTGGCCAGGGTGCCGCCGCGGATCAGGAGGCGGCTCCTCCTCCGGCACCGCGGGGGAGCGCCGGCCACCGCGGAGGAGATCGAGGCCAAGCTCCGCGATGCGGACCTCCGGAGGCAGGTGGGTCGCTGTGATCTCTCGGCGCACCCGGCGCGGCGCTTTCGAGATTTAGTTTTATGGTTTTTTTTTTCGTGTTTCTGGGTGATTTGGTTGTGGTTTTGGTCGGTGGATTAGGGGCATCTGTGCAATTCATGTCAATATACGTTTCATCAGGTTGGTAGTTAGTGAATTGGGAGTAGCATTCCGGAGTGCAGATTTTAGTCACGTAGCTGGATTACTGAATGGTTTGTGTTAGAAGCAATTGGCCATCACATGATTTGCTGGGAGTTGATTATCAAGGTAACGCTGTTCTTGATCAAACCCGGGAGCCACAATATAACTTGGGGTTTATCTCAACCATGTCAAAATGGGAGCCCAGATTCATTTTAGGATGATTGATATTTGAAGGCTTCCAATTTTGCTGTCAGCCTGTAAAATGGGTTCTACAAACAACAATTAAAATTGGTGTTGTTGCCAAGTTCATTTGAAGGACTGGCAGAAAAAAGTACGATCACTGTGGCTTGTTAACTCATGTGTATTCTATTCCTCCAGCAATTTCATGAAGCGTTATCGTGCAAAGCGAGGTGCACAGTCAGATACCCTTCGTGTCCATCTCAGGAGGAGGATCCTAAGAAGCGCCTTGAAGCAAAGCTTGTGGCTGCCGAGCAGAAAAGGTAACAGAAAGAGGGACCTAGTCACCTAGCAGAGCATATTTATCTGATCGGATATTAAGATAGGGAACAGTGAGAAGTGATTTCTGATTGCAGGTTAAGCCTCCTGGCTAAGGAACAAAGTCGGCTTGCTAAGTTGGACGAGCTGCGTCAGGCTGCTAAGAATGATGCGGAGTTGAGGTTCAAGAAGGAGAGGGAGGAACTTGGCATGAAAGTTGAATCTAGAGTTCGGCAAGCGGAGGAGAAACGTACACAACTCATGCATGCTCGTTCGCAGAGGAGGGCTGCACTGGAGGAAAGAACAACAAAGTACCTTGTGCAGAGAGTGGCGTGGGAAAACAAGTACAGGGAGCGTGTACATTCAGCGATCCTGCAGAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTTGACTTACATTGCAAACTATTTATGCAAAACAGGCAAAGCGGCAGAGAGCTGAGTATTTGAAGCAGCGAGGAAGTACTCACAGCTTTACATACACCGCTTCAGTTAAAAACGGTGATTTTCTTTCAAGAAAGCTGGCAAGGTATGGTAGACTTATACAGTCAACTTTCTCGCAATTGTTTGGCTTGTGTGTATACTTTAAATTTTATTGATTATTCTATTCGATTTGATGCTTCAGATGCTGGAGAAGATTCATAACATCTAGGAAGACAACAGTGGTGTTGGCTAGGGCCTTTGACATGCTAAGAATAAATGAGGAATCTGTTAAGCCTATGCCATTTGAAAAACTAGCTCTTTGCATTGAATCTCCCACAGTTCTTCAGACCACAAGGGCATTTCTTGATCGCTTGGAGAGTCGTTTTACTTTATCTCAGTCATCAAGTCCATCATCACCAGAAAATATTGATCATCTGCTCAAGCATCTGGGATCACCAAAGAGGACTCTATCAAAAAGTGGGGGAAGAACTAGAGTGACACCAACAAAGGCAGCTAGAAATTCAGATGTTAGCAAGTTACCTAGATATTCACCGAGGATAGTTCTTTGTGCTTACATGATACTAGGTCACCCGAGTGTTGTTTTTAATGAACGAGGTGAGCGAGAGAAACTACTTGTGGAGTCAGCAGAAAACTTTGTGAAGGAATTCGAACTGCTGATTAAGACAATACTTGATGGGTCAAGTGGTGCGTGCATACTGAAACAGCCAATACTAGATGATCTGTCTCCTGGATCTTCTAATTATCAGGAATCTTCTGCCGTTATTGCTGATCGGAAGAAATTCAGATCTCAGTTGGCTTCTTTTGACAAAGCTTGGTGTGCCTATCTTTACCACTTCGTGGTGTGGAAAGCAAAAGATGCAAAGTCACTAGAGGAAGATCTTGTCAGAGCTGCATGCAAACTTGAGCTATCAATGATGCAAACATGTAAATTTACCGCTGAAGGCCAACCAGAGAACCTTAATGATAATTTAAAGGCCATCCAGAAAGAGGTATGGTTATATACCTGGTGCCTTTTCCTTTGTTTTTTTCTTTTACCTATTTCCCTGACATTAGTAATTGAGAAGTATTTTAAGTGCATAAAATCCTGCTATTCAGCTATTGCAGGAAGCAGTCCATTCCTACAACTTTGCACTTAGTTTATTTATTTTGATTATAGTTTTCTTTTGTCTAGTCAAAACTTTACTATCTGTTGAAATTGTTTCTGTTCATCACCCAGGTTATGGTAGACCAGACACTTCTAAGGGAGAAGGTTCGGCACTTGGGTGGTGAAGCTGGTATTGAGCGGATGGAAGTTGCTTTATCAGAAGCAAGGACAAAGTTTTTTGAAGCAAAGGGAAACAGGAGCCCCTTGGCAACAACTATAAAAAATGTAGCAGCTACATGTTCTTCTGGAGAATCTCCTATTTCTGACATGAAGGAGAATTCCAACATTAATGATAAAAGGCCAAGTCAGGCTGACCAATCTATGTTCAGAGTTCCCTCTTCACCATCTGAAAGTAACACAGCAGGCATCACCATGAGTAATCCAATGACAGTGAGCAGCACTCTGTCAGAAAAACGGCCAACAGAGAACGAGCAGATGGTCAATGAGATTCTTCATGGTTTTCTAGCTGACAGCTCTAGTAATATTGGGACTGTTGAGGGTGGTTTCAAGGTTAGATCCTATGTTACATTTATACTAGGATTATATTGTAAGTTTTCATATTGCTGGGGTGCAGACAATAATAACCAAAAATGTATAACATGAGAAAGAATTTGGGAAGCTTTTAGAGGGGCTCACATGCTGTGATTTAGGGTCTAGATTCTATTAATGTGGTACGTCTATCAGCTTAAATATGAACTTTTTTGCATCCAGTCACTCTTTTTTTTCTCAGGAAAAAGTAAGGGAAACAATGGAGAAAGCTTTCTGGGATGTGGTTGTGGATTCACTTAGAGGAGACATGCCAGACTACAGCTATCTGGTTCAGCTGGTAAAGGAAGTCAGGGATACATTGTATGAGATGGTTCCTAAAGGTTGGAAAGAAGAAATAATCAACAATATTGACCTTGAAATTTTGTTGCAGGTAAGAAGAGCTTGAGTGATTTTATCATGAATCTACAGAATATATCTGATACCAGTTTTGTTGTTTTTTGGTTGAAAGGTACTTGAATCGGGCACCCAGGACATGCAATATTTGGGACAGATTTTGCAGTACTCTCTGGGTATGCTGCGAAAACTATCCTCTCTTGCAAAGGAAGACGAAATGAAGAGAAGCCATGACAAATTATTGGGTGAATTAACTGAACACTCTGAGTGTAATAACAGTGGTTCAAATTCATTTGTAATTGCTGTTATCAAAGGTTTGCGCTTCACCATGGAAGAACTAAAGGTTTGCGAACTCCTTGAGTTCTTAAATAAACTTCATGGAATATACATTGTGAACCTATAACAGCCTCCATTTTTTTTATTTTTTTTGTAAAATAAACAGGCTCTGAAGACAGAAGTCAGTAGAGCACGTATCCAACTATTAGAACCAATTATAAAGGGCTCAGGTGGAGTGGAATACCTGCAGAAGGCTTTTGCTGATCGCTATGGATTCCCGTCCAATGCATCAGTTGCTCTCCGTTCAACTGCTCAGTGGATTTCCACATCAAAAGATACCGTGGAAGTAGAATGGAATGAGCATGTCAGCTCTTTTTCAGCTCTGCCAGAAACCGATCATGTTAAGTCTATGAATTAATTTTATGCAGTAGTCACAGCAGTACACAACCGCTGTTTGTAGCAATAGTAGTTCAAGTATCTATTATTTTCACCTGCTGTTGATTTTACTTACACATCCCTCGTAACAGGCTCAGCCACTTGTTGCCACCCTCCGATCAGGTCATGGAGTTCCAGATCAGCGACAGTCTACAATACCTGTGTCAGGTATTTATTCTTTTTTCCCCTTGTATGGCCATTGTTCTGAACTCCTTAATCATTTAGTGTCATGATAAGCAGATGATACGGGGCTACCAGAGTGCACGGGGCAAAGGCTTGACCAGCTAATAAGGATTGGGTTGTTACAGCTCATCAGTGGCATAGAGGGTGTGCAAATGCAGTCAGTAACTGAGACCTTCAAGCTCAATTGGTTGAGGCTGAGGTCTGTACAGAGTCAATTCCAGCAAGTGATTGTAATTGCAACAAGGTGAAACATTACTCAATTTTTTCACTTTATTCACTTCACTGCTCTGAGTATCAGCAGTTAGCTAGAATGGTATAACCAAACCCAATTACGCCTTTTTTTTTTCCTCGCAGCATGCTTGTGCAGCGTCAAGTTTTGGCGACCGACGACCCAAACATCACTCCCACAGAGCTGGAAAGCGCGACATCACAACTGTTCAACACTCTCGCAGAGCTACTGGACAAATTCCCCGACGTTAGCACCGCCAAGATCATGGAGGTGATGCTCCGTTCGTCGTCGTCGTCGTCATCAGGCTCGACAACCGGCTCTCCATCAGATGAAAGAACCGAGAGCAGGAAGCAGATACTGGCCAGGGTCTTCCTCAAGAGCCTCCAGACCGATGACCCCGTCTTCAAGAAGGTCTCCCGGTCCGTCTACTGTGCGTTCCGCGCGATCACCCTCGGTGGCAGCGGTGCCAGGGGACGGAAGCTCGCCGACGCCGCCCTGAGGCGCATCGGCGCGACGAAGCTCACCGACCGGGTGGTGAGATCGGCCGAAATCCTCATCAGGGCCGCGTCCATTTCACAGCAGGTCCACGGCCCTTGGTACAATCACTTGGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008426

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008426&oldid=61978"