BGIOSGA008479

From RiceWiki
Revision as of 03:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008479| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008479, complete gene.| tag = OsI_077...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008479

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008479, complete gene.

LocusTag

OsI_07769

Ensembl Transcript ID

BGIOSGA008479-TA

Ensembl Protein ID

BGIOSGA008479-PA

Length

1394

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23801429..23802822

Sequence Coding Region

23801429..23802178,23802592..23802822

Genome Context

<gbrowseImage1> name=IndicaChromosome02:23801429..23802822 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:23801429..23802822 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCTGTTGTAAGTTCTGCAAAGATTAATGCCCGATCTATGGACCGGCATGAAAAATCTGGATTTGGTTCTAATAAGAGGGTCAAGATCTCCACATATGAGTGCGATTCGTTTCAGAGGATAATTCCAACTCTTCCCGATGAACTCTCGTTTCAAATTCTAGCCAGGTTACCACGGTTGTATTACCTAAAGTTGAAGTTGGTCAGCCAAGCTTGGAAGGCGGCAATCACCAGCAGTGAGCTTTCCCAGCTGAGAAGAGAGCTTGGCTTAACTGAAGAGTGGTTGTATGTACTGACCAAACTTGAGCCAAACAAACTCGATTGTTATGCTCTTGATCCATTGTTCCGCAAATGGCAAAGGTTGCCACCGATGCCATCTTTTGTCAGTGAGGAGGAATCCACTGGGAGGACGCAGTCTTCTTGGTTCCAGATGTGGAATGTTGTGGGCTCAAGTATAAGGATTGCTGACTTTATAAAGGGATGGTTTCGTCGCCGATATGGTTTGGACCAGATGCCATTTTGTGGTTGCTCCGTTGGAGTTGCTGATGGTTGCTTGTATGTCTTTGGAGGATTTTCCAGAGCTGTTGCCCTCAACTGTGTATTTAGATATAACCCTTGCCTCAATGTGTGGCAGGAAGTGAGCCCGATGATATCAGGTCGAGCTTTTTCTAAGGCAGCATTACTGCAGAGTAAGCTATATGTTGTCGGTGGAGTTAGCAGGGGTCGGAATGGCTTGCTTCCTCTAACGGTTCCTGTTCATGATTTCACCGATGCAGAGGCTCCTTTTTTACTTGCTGGCCTTCATGGAAAGGTCCACGTTATTACAAAAGAGGCAAACAACAATCTTCAAGTTATGCAAGCTGTATTGCAGAATAACATTGAGAACAGTCCATCTGAAGAAAACATCATATGGAACATACTGGCTTCAAAGAACTTTGGGTCTGCTGAGCTTGTTAGTTGTCAAGTTCTTGATGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MGSVVSSAKINARSMDRHEKSGFGSNKRVKISTYECDSFQRIIPTLPDELSFQILARLPRLYYLKLKLVSQAWKAAITSSELSQLRRELGLTEEWLYVLTKLEPNKLDCYALDPLFRKWQRLPPMPSFVSEEESTGRTQSSWFQMWNVVGSSIRIADFIKGWFRRRYGLDQMPFCGCSVGVADGCLYVFGGFSRAVALNCVFRYNPCLNVWQEVSPMISGRAFSKAALLQSKLYVVGGVSRGRNGLLPLTVPVHDFTDAEAPFLLAGLHGKVHVITKEANNNLQVMQAVLQNNIENSPSEENIIWNILASKNFGSAELVSCQVLDV</aaseq>

Gene Sequence

<dnaseqindica>1..750#1164..1394#ATGGGCTCTGTTGTAAGTTCTGCAAAGATTAATGCCCGATCTATGGACCGGCATGAAAAATCTGGATTTGGTTCTAATAAGAGGGTCAAGATCTCCACATATGAGTGCGATTCGTTTCAGAGGATAATTCCAACTCTTCCCGATGAACTCTCGTTTCAAATTCTAGCCAGGTTACCACGGTTGTATTACCTAAAGTTGAAGTTGGTCAGCCAAGCTTGGAAGGCGGCAATCACCAGCAGTGAGCTTTCCCAGCTGAGAAGAGAGCTTGGCTTAACTGAAGAGTGGTTGTATGTACTGACCAAACTTGAGCCAAACAAACTCGATTGTTATGCTCTTGATCCATTGTTCCGCAAATGGCAAAGGTTGCCACCGATGCCATCTTTTGTCAGTGAGGAGGAATCCACTGGGAGGACGCAGTCTTCTTGGTTCCAGATGTGGAATGTTGTGGGCTCAAGTATAAGGATTGCTGACTTTATAAAGGGATGGTTTCGTCGCCGATATGGTTTGGACCAGATGCCATTTTGTGGTTGCTCCGTTGGAGTTGCTGATGGTTGCTTGTATGTCTTTGGAGGATTTTCCAGAGCTGTTGCCCTCAACTGTGTATTTAGATATAACCCTTGCCTCAATGTGTGGCAGGAAGTGAGCCCGATGATATCAGGTCGAGCTTTTTCTAAGGCAGCATTACTGCAGAGTAAGCTATATGTTGTCGGTGGAGTTAGCAGGGGTCGGAATGGCTTGCTTCCTCTAACGGTCAGGTGAAGTTATTGATCCCAAAACTGGTATATGGAGTGAGTTGCCCTGAAATGCCTTTCATGAAAGCACAGGTATTACCAACCACTTTCTTGGCTGGATGGTCCTGAACGCCTATCGCCACTGGAAATGGCGATCTACAAGGAAAGCTGGATGTTCCTCAAGATTGCCCTCATGGCCATTCCTTTTTCGAGATGGAAGTGAAATTAGAACCGGGAATTGACTCTGGGAAACAATGGCANGATGGTCTTNGGTGAATGGNNATGGCCAGCAAGGGCAGGGCAGNGGCACAAAATTAGGTATTGTGGTGAATGAGGAACGTTGATACGTTGGAGCCTTCTAGCTCCTTGGACAGTGGCCAGATAAAAAGGTATGATTCTGAACAAGACACCTGGAAAACTATTGTACCACAGGTTCCTGTTCATGATTTCACCGATGCAGAGGCTCCTTTTTTACTTGCTGGCCTTCATGGAAAGGTCCACGTTATTACAAAAGAGGCAAACAACAATCTTCAAGTTATGCAAGCTGTATTGCAGAATAACATTGAGAACAGTCCATCTGAAGAAAACATCATATGGAACATACTGGCTTCAAAGAACTTTGGGTCTGCTGAGCTTGTTAGTTGTCAAGTTCTTGATGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008479