BGIOSGA008898

From RiceWiki
Revision as of 03:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008898| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008898, complete gene.| tag = OS02G07...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008898

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008898, complete gene.

LocusTag

OS02G0708600

Ensembl Transcript ID

BGIOSGA008898-TA

Ensembl Protein ID

BGIOSGA008898-PA

Length

5460

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31160680..31166139

Sequence Coding Region

31160680..31163367,31163515..31163676,31164988..31165104,31165215..31165324,31165580..31165717
,31165871..31165958,31166032..31166139

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31160680..31166139 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31160680..31166139 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCCTGAATTAGTCCCCGAGTGGAAAACTTGGAAACAGGAAGTCATGAAACAGTTCTTTTCATCTCATCCAGTTGGCAATGCTGGCAACTTTGAACAACACAATTGTTATGATGATCCAGGTATGGATCAACAAGCTCGTATAAAACATTCCAAACTCGAAGTCCGCAGAGGAGAAGCTCATTTTTCACAAGAGGATGATGCTAACCTCAACACATTAAGTGAAGACCCAAACAAAAGTAACCTCCCCAGTATCTCCATCATTCATGAAGCTGTAGGACCATTAGAGTCAAGAGATCAGAATAAAACTGCTGCCTTCCCCAGTACTTCTGGTGTCCAGGACACTGGAGAACCAAATAGTGCTTTACACAATGTCAGACATGAATTGGATTCATTCAAGAGTTCTCGGCAGTGTTCTGCATATATAGAAGCAAAAGGAAGGCAATGTGGTAGGTGGGCAAACGATGGTGATATTTACTGTTGTGTGCATCAAAGTATGCATTTTGCTGACCATTCGTCTAGGGAAGATAAGTCACTTACTGTTGAAACTCCACTGTGTGGGGGGATGACTAATCTTGGTAGAAAGTGCAAGCATCGAGCCCAGCATGGTTCTATCTTTTGTAAAAAGCACCGCTTCCAAACAAATCCAGATGCAATGAGCTCAGATAGTTTGTTAAGTTCGTCTGAGGGCCGTAAGTGGGAAGAGTCACAGAAAAGCGTGGAGAAGATGTCTTCCTCAAATGCAACTTGTAGTGTAGGCTCAGAGCAGGCAAATAATTTCCAGGTTGCTGTGCACATGAAAGTGACACCAACCATGGCTGTTGAGACAACTAGTGATAAAGTTAACGTGTCAGAGAACGCTGATCTCTGCTACCCCATGTCAACTTCCATGGAAAACTCTAACTTAGATGCTTCTATTTGCATTGGAATTCGCTCTCATGACAATATTGCTGAATGCCAGGATTATGCCGTACGACACACACTTTACTGTGAGAGGCACATACCGAAGTTCCTTAAACGTGCCAGAAATGGAAAAAGTCGACTCATCTCTAAAGATGTCTTTATCAATCTTTTGAAGTGTTGCACGTCAAGGAAAGAAAAACTGTGCTTACATCAGGCATGTGAGTTTCTTTATTGGTTCTTGAGAAACAATCTTTCTCACCAACGCCCGGGTCTTGGTAGTGACCATATGCCCCAGATATTAGCTGAAGTGTCAAAAAATCCTGATGTTGGAGAATTTTTGTTAAAACTGATCTCTAGTGAGAGAGAAAAGCTTTCACATGTTTGGGGCTTTGGTACAGATAGCTCTAATCAAATGCATTCTGAGAACCAAGATGGATCAGTGATGGTGTTACGTGAAGATGGGACACATCCTTCACCTGGTCTGAAGTGCAAAATATGTTCTCAGGAGTTCTCTGATGATCAAGGACTTGGATTACACTGGACAGAGGTTCACAAAAAAGAAGTGCGGTGGCTTTTCAGAGGCTATTCTTGTGCTGTATGCATGGACTCATTTACCAACAGAAGAGTTCTCGAAAGGCACGTGCAGGAAAAACATGGCGCTCAGTATCTCCAATATTCGACACTCTTACGTTGTATATCGTGCAACAGCAACTTTTTGAACACAGATCTTTTATGGCAGCACATTGTTTCAGATCATTCTCGAGATTTCAGCCTTCTGGATCATGTCCCTCGACGACCTAGGGGTCAATCTATCAAAAGAACAGAAAGGGCAAGTGATGAGCTCCTTTATGATAACCATAACCTTGGTAAGGATGATGGTTCACAGAAGTTCACCTGCAGATTATGTGGGATGATGTTTGATCTTTTGCCAGATCTTGGCCACCACCATCAAGTTGCTCATACAAACTCAGGTACAGTCAGTGATATCCCTTCAGGACGTGAAAAGTATCAGTTTAACCGTGGTCGGCACTATTATTCAGCCTTCAAGAAAAGTTTAAGACCATCCGGCTCATTGAAGAAGAGGACTAGTTCTGGAGTTGAGAAACATTTTAAGGCTCAAAGCTTGGATCTATCTATGGATACATCACACATTGTGGAATCTGAGACCACCACCCTTGGTAGGTTACTGGATTTCCAATGCTCAGACGTGGCATTGACTTTATTTTCAAAGATTCAAAAGACAAGACCCCACCCAAGCAACCTTGATATTCTGTCTATTGCCCGTTCTGTTTGCTGTAAGACAAGCCTTCGTGCTGCATTGGAAGCTAAATATGGAATCTTGCCTGATAACATATTTGTGAAAGCTGCAAAGCTTTGTAGTGATGTTGGCATCCAAATTGATTGGCATCAAGAAGAATTCTTTTGCCCTAAAGGTTGCAAGTCCAGGTCTAGTTCTAATTCCTTGCTCCCTTTACAGCCTACCCAAGTTGATTTTGTGATGAGTCCTCCAATTGGTGATGAGATATGGGGCATGGATGAATACCACTATGTTCTTGATTCAGAGCACTTTGGTTGGAATCTTAAGAATGAGATGGTTATTGTTTGTGAAGATGTTAGCTTTGGCAGGGAGAAAGTTCCAGTTGTCTGTGCCATTGATGTAGATGCAAAAGAATTTCCATATATGAAACCTGGAGAAATTTTGCAAAGTGAAAATTCTCTGCCCTGGCAAGGTTTCCACTACGTCACAAAGCGTTTGATGGATTCATCTCTTGTTGATTCAGAGAACACTATGGTTGGGTGTGCTTGTTCTCATGCCCATTGCAGTCCTGAGGAATGTGATCATGTGAGCCTCTTTGATAGTATCTATGAGAACCTAGTGGATCTCCATGGTGTACCTATGCGTGGTAGATTTGCATATGATGAAAATAGCAAAGTTATTTTGCAGGAAGGATATCCTATATATGAGTGCAATTCATCATGCACTTGTGATGCCTCCTGTCAGAATAAAGTACTGCAGAGAGGACTGCTGGTAAAGTTGGAAGTCTTCAGAACTGAGAATAAGGGTTGGGCTGTTAGAGCCGCAGAACCTATTCCACAGGGCACATTTGTATGTGAGTACATTGGAGAGGTTTTGAAGATGAAGGATGATGGGGCCATAAGACATGTAGAAAGGGAGGCAAAAAGTGGTAGCAGCTACTTGTTTGAAATCACTTCTCAGATTGACAGGGAAAGAGTTCAGACTACAGGGACTACTGCATACGTGATTGATGCCACAAGATATGGCAACGTATCCCGTTTTATTAATCATAGCTGTTCCCCAAATCTCAGTACGCGTTTAGTTTCGGTGGAGAGCAAAGACTGTCAGCTTGCTCACATTGGTTTGTTTGCAAACCAGGATATCTTGATGGGAGAAGAATTGGCCTATGACTATGGACAAAAATTGCTACCTGGTGATGGATGCCCCTGCCATTGTGGTGCTAAGAATTGCCGAGGACGTGTGTATTGA</cdnaseq>

Protein Sequence

<aaseq>MQPELVPEWKTWKQEVMKQFFSSHPVGNAGNFEQHNCYDDPGMDQQARIKHSKLEVRRGEAHFSQEDDANLNTLSEDPNKSNLPSISIIHEAVGPLESRDQNKTAAFPSTSGVQDTGEPNSALHNVRHELDSFKSSRQCSAYIEAKGRQCGRWANDGDIYCCVHQSMHFADHSSREDKSLTVETPLCGGMTNLGRKCKHRAQHGSIFCKKHRFQTNPDAMSSDSLLSSSEGRKWEESQKSVEKMSSSNATCSVGSEQANNFQVAVHMKVTPTMAVETTSDKVNVSENADLCYPMSTSMENSNLDASICIGIRSHDNIAECQDYAVRHTLYCERHIPKFLKRARNGKSRLISKDVFINLLKCCTSRKEKLCLHQACEFLYWFLRNNLSHQRPGLGSDHMPQILAEVSKNPDVGEFLLKLISSEREKLSHVWGFGTDSSNQMHSENQDGSVMVLREDGTHPSPGLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQYLQYSTLLRCISCNSNFLNTDLLWQHIVSDHSRDFSLLDHVPRRPRGQSIKRTERASDELLYDNHNLGKDDGSQKFTCRLCGMMFDLLPDLGHHHQVAHTNSGTVSDIPSGREKYQFNRGRHYYSAFKKSLRPSGSLKKRTSSGVEKHFKAQSLDLSMDTSHIVESETTTLGRLLDFQCSDVALTLFSKIQKTRPHPSNLDILSIARSVCCKTSLRAALEAKYGILPDNIFVKAAKLCSDVGIQIDWHQEEFFCPKGCKSRSSSNSLLPLQPTQVDFVMSPPIGDEIWGMDEYHYVLDSEHFGWNLKNEMVIVCEDVSFGREKVPVVCAIDVDAKEFPYMKPGEILQSENSLPWQGFHYVTKRLMDSSLVDSENTMVGCACSHAHCSPEECDHVSLFDSIYENLVDLHGVPMRGRFAYDENSKVILQEGYPIYECNSSCTCDASCQNKVLQRGLLVKLEVFRTENKGWAVRAAEPIPQGTFVCEYIGEVLKMKDDGAIRHVEREAKSGSSYLFEITSQIDRERVQTTGTTAYVIDATRYGNVSRFINHSCSPNLSTRLVSVESKDCQLAHIGLFANQDILMGEELAYDYGQKLLPGDGCPCHCGAKNCRGRVY</aaseq>

Gene Sequence

<dnaseqindica>1..2688#2836..2997#4309..4425#4536..4645#4901..5038#5192..5279#5353..5460#ATGCAGCCTGAATTAGTCCCCGAGTGGAAAACTTGGAAACAGGAAGTCATGAAACAGTTCTTTTCATCTCATCCAGTTGGCAATGCTGGCAACTTTGAACAACACAATTGTTATGATGATCCAGGTATGGATCAACAAGCTCGTATAAAACATTCCAAACTCGAAGTCCGCAGAGGAGAAGCTCATTTTTCACAAGAGGATGATGCTAACCTCAACACATTAAGTGAAGACCCAAACAAAAGTAACCTCCCCAGTATCTCCATCATTCATGAAGCTGTAGGACCATTAGAGTCAAGAGATCAGAATAAAACTGCTGCCTTCCCCAGTACTTCTGGTGTCCAGGACACTGGAGAACCAAATAGTGCTTTACACAATGTCAGACATGAATTGGATTCATTCAAGAGTTCTCGGCAGTGTTCTGCATATATAGAAGCAAAAGGAAGGCAATGTGGTAGGTGGGCAAACGATGGTGATATTTACTGTTGTGTGCATCAAAGTATGCATTTTGCTGACCATTCGTCTAGGGAAGATAAGTCACTTACTGTTGAAACTCCACTGTGTGGGGGGATGACTAATCTTGGTAGAAAGTGCAAGCATCGAGCCCAGCATGGTTCTATCTTTTGTAAAAAGCACCGCTTCCAAACAAATCCAGATGCAATGAGCTCAGATAGTTTGTTAAGTTCGTCTGAGGGCCGTAAGTGGGAAGAGTCACAGAAAAGCGTGGAGAAGATGTCTTCCTCAAATGCAACTTGTAGTGTAGGCTCAGAGCAGGCAAATAATTTCCAGGTTGCTGTGCACATGAAAGTGACACCAACCATGGCTGTTGAGACAACTAGTGATAAAGTTAACGTGTCAGAGAACGCTGATCTCTGCTACCCCATGTCAACTTCCATGGAAAACTCTAACTTAGATGCTTCTATTTGCATTGGAATTCGCTCTCATGACAATATTGCTGAATGCCAGGATTATGCCGTACGACACACACTTTACTGTGAGAGGCACATACCGAAGTTCCTTAAACGTGCCAGAAATGGAAAAAGTCGACTCATCTCTAAAGATGTCTTTATCAATCTTTTGAAGTGTTGCACGTCAAGGAAAGAAAAACTGTGCTTACATCAGGCATGTGAGTTTCTTTATTGGTTCTTGAGAAACAATCTTTCTCACCAACGCCCGGGTCTTGGTAGTGACCATATGCCCCAGATATTAGCTGAAGTGTCAAAAAATCCTGATGTTGGAGAATTTTTGTTAAAACTGATCTCTAGTGAGAGAGAAAAGCTTTCACATGTTTGGGGCTTTGGTACAGATAGCTCTAATCAAATGCATTCTGAGAACCAAGATGGATCAGTGATGGTGTTACGTGAAGATGGGACACATCCTTCACCTGGTCTGAAGTGCAAAATATGTTCTCAGGAGTTCTCTGATGATCAAGGACTTGGATTACACTGGACAGAGGTTCACAAAAAAGAAGTGCGGTGGCTTTTCAGAGGCTATTCTTGTGCTGTATGCATGGACTCATTTACCAACAGAAGAGTTCTCGAAAGGCACGTGCAGGAAAAACATGGCGCTCAGTATCTCCAATATTCGACACTCTTACGTTGTATATCGTGCAACAGCAACTTTTTGAACACAGATCTTTTATGGCAGCACATTGTTTCAGATCATTCTCGAGATTTCAGCCTTCTGGATCATGTCCCTCGACGACCTAGGGGTCAATCTATCAAAAGAACAGAAAGGGCAAGTGATGAGCTCCTTTATGATAACCATAACCTTGGTAAGGATGATGGTTCACAGAAGTTCACCTGCAGATTATGTGGGATGATGTTTGATCTTTTGCCAGATCTTGGCCACCACCATCAAGTTGCTCATACAAACTCAGGTACAGTCAGTGATATCCCTTCAGGACGTGAAAAGTATCAGTTTAACCGTGGTCGGCACTATTATTCAGCCTTCAAGAAAAGTTTAAGACCATCCGGCTCATTGAAGAAGAGGACTAGTTCTGGAGTTGAGAAACATTTTAAGGCTCAAAGCTTGGATCTATCTATGGATACATCACACATTGTGGAATCTGAGACCACCACCCTTGGTAGGTTACTGGATTTCCAATGCTCAGACGTGGCATTGACTTTATTTTCAAAGATTCAAAAGACAAGACCCCACCCAAGCAACCTTGATATTCTGTCTATTGCCCGTTCTGTTTGCTGTAAGACAAGCCTTCGTGCTGCATTGGAAGCTAAATATGGAATCTTGCCTGATAACATATTTGTGAAAGCTGCAAAGCTTTGTAGTGATGTTGGCATCCAAATTGATTGGCATCAAGAAGAATTCTTTTGCCCTAAAGGTTGCAAGTCCAGGTCTAGTTCTAATTCCTTGCTCCCTTTACAGCCTACCCAAGTTGATTTTGTGATGAGTCCTCCAATTGGTGATGAGATATGGGGCATGGATGAATACCACTATGTTCTTGATTCAGAGCACTTTGGTTGGAATCTTAAGAATGAGATGGTTATTGTTTGTGAAGATGTTAGCTTTGGCAGGGAGAAAGTTCCAGTTGTCTGTGCCATTGATGTAGATGCAAAAGAATTTCCATATATGAAACCTGGAGAAATTTTGCAAAGTGAAAATTCTCTGCCCTGGCAAGGTTTCCACTACGTCACAAAGCGTTTGATGGATTCATCTCTTGTTGATTCAGAGGTATTTTCTGGATTTTGCTTTTATGATGAACAGAAACTTGCATATTAATTGAACGAAAGGAACCAAGACTATTTTTCTTTGGTTTTTATATATTGCAACTTTTTTGTCTCCTGCAACTTAGTCTTCTAATAAGTTGCTTACCTGCAGAACACTATGGTTGGGTGTGCTTGTTCTCATGCCCATTGCAGTCCTGAGGAATGTGATCATGTGAGCCTCTTTGATAGTATCTATGAGAACCTAGTGGATCTCCATGGTGTACCTATGCGTGGTAGATTTGCATATGATGAAAATAGCAAAGTTATTTTGCAGGTAATAATTGTTACTGGCGTATATTTTTACCTACACATGTTTTTTTGACAAGTACTCTGGCATGTATGGCTTTAGGAACATTGGAAATATGAACAGAAATGTGCACTAGTACCACCATCAATTTCTGTTCAAGAATGTGGGTTTTGACCAACGCAAGGGAAGTCTTACATTTGTTTTCTCCAAAATGACCAAACTATCCTAATAAATAATCTCTTGTCCACTTTTCTCCACAAATGGGATGAGGATGGGAGATATTAAATAAGAGCAAAATGTGAAGCTGTGCTTTGGAAAAAAATGACATGTCCTCCGTATCGTGAACCAATAAAGTAGTCAAAAGTGGCCAGTATTTGTGAATGGAGTTGTGCTGGCTGTTCTTGGTTGTGATATCCAAAGCGATTTCGAATTTTGAAGCTTGGCTTTTAAGAATAATTTTAGGTAGATTTTTTAGTTGTCTTCTTAACAGTCATGAACATAGAGCTGGGCAATGAAAGAGATGAAATAACCCTTAAAGTTAATCCTAAATCGAAATCTAAAATTTAAAATCACCTTTGGATTAATCCAAAGCACAAGCAAGCGCAGCCCCATTGATCTGATCATTGATACCTTGATATCTGTGACTAGCTGGTAATGCAACCTTTTTTTTCTTTATGATGCAAGCACACTACATTTTTCTCAAGAAGTTTGCCATCTTATTTTGAAATTTAGCTTAAACTGCGATTAAATAAATACCTATCATTGTGTGTTGCCATCTCCCTGAGCTCAATATCATGTCCACTTATATGTTCTTATTAAGGATGTCCTTATCCACTATGGTGTTCGTGTATAGCATACTCTAACCTGTTTTAATTACTAATGCAATCTCTGAGTCCCATAGCTGTATCAAAAGCCTTCTGTTGCTATTCACCCTTAAACTTACTTCTGGAGAGCTGCAGAAACAATAGTAGATTGGTTCTTTAACCATAATTTACAGGCTCCACATCCATGGTGACATTATCGCATACAACGGTTTCATCTAAAAAACAAACCTCTTTATTTTGTCGTGATTTGACCTTTACATCCATGGTGGCATTATCTCGTTCATCTTTTATGGTGACATAACTAATTCCAATAGCTATCTGCCAATGTCAAAAGGGATGTGCGTGGGATTTGGGCTCATTGATATTGAGTTGTTCTTCAGGTCTGCAGATAATGTCTGACTGAGTATTTGTACACCTTTTGCTTGAGCTCATTTCAAAGATATCCATCATCTAGGCATTCATTTCTCATCATTTTATTGTATAATTTGATGTCTATGTGTTGTTAAATTTGCAGGAAGGATATCCTATATATGAGTGCAATTCATCATGCACTTGTGATGCCTCCTGTCAGAATAAAGTACTGCAGAGAGGACTGCTGGTAAAGTTGGAAGTCTTCAGAACTGAGAATAAGGTGAAATATTCTCCACTTGTTTTTTTGGTTTCCTGAGCGTTGCACCTTACCTTTGACGTCAAGATAAAACCTGCTTACAAGTGATATTTTTGTTTTGTCAAATGCTGCAGGGTTGGGCTGTTAGAGCCGCAGAACCTATTCCACAGGGCACATTTGTATGTGAGTACATTGGAGAGGTTTTGAAGATGAAGGATGATGGGGCCATAAGACATGTAGAAAGGTTTGATGATTCTCTTGTTATTTCTTTTATTTAGGCTAGAAATCTATTGGAATTTCTCCGGTGCATTCCATGTAAGCTTCATTGAATTTTCTTGGTCATTATGATGCCCAGTCTTGCCTAAATGCCCAATCTCTGCCTAAACTATATTTTCATCTTGCACACATTCTGGTTTCACGCTGTTCTTGTTCTATAGTCTGAACATTTGGAGTATTATTATTATGCTCAGAAACTGATAAGAAAATTATTGGATCTCAGGGAGGCAAAAAGTGGTAGCAGCTACTTGTTTGAAATCACTTCTCAGATTGACAGGGAAAGAGTTCAGACTACAGGGACTACTGCATACGTGATTGATGCCACAAGATATGGCAACGTATCCCGTTTTATTAATCATAGGTAACTGGACTATTTTATGTCTGTCCCAAAATATATTAACTTCTAGTAGCTATATTGAAGTTAATATATTTTGGGATGGAAGGAGTACTTGGGAACATCTTACTACGGGATAAATTTGTTCTGGAACCAATGCTTTTGTCCCCTTCATTGCAGCTGTTCCCCAAATCTCAGTACGCGTTTAGTTTCGGTGGAGAGCAAAGACTGTCAGCTTGCTCACATTGGTTTGTTTGCAAACCAGGATGTAAGAATTTTTTTACCACCTCTTCCTACATCGTTATACGTACCTTGCTAATTGTTGTTTCACTGTTGTCCAGATCTTGATGGGAGAAGAATTGGCCTATGACTATGGACAAAAATTGCTACCTGGTGATGGATGCCCCTGCCATTGTGGTGCTAAGAATTGCCGAGGACGTGTGTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008898