BGIOSGA009386

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Revision as of 09:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009386| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009386, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009386

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009386, complete gene.

LocusTag

OSJNBA0033P04.27

Ensembl Transcript ID

BGIOSGA009386-TA

Ensembl Protein ID

BGIOSGA009386-PA

Length

3570

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40828857..40832426

Sequence Coding Region

40831398..40832426,40830136..40830534,40829869..40829983,40829706..40829787,40829449..40829500
,40829299..40829353,40828857..40828963

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40828857..40832426 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40828857..40832426 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCCGGTGAATTTCGGGGATTCGTCGTCGATTCCCCCAGTGGATGCGGTGGTGCCAATGGCAATGGCTCCTCGGTTACTCTGCTTCCTCTTCCTCCTCCTGCAGCTGTTGCTCTTCCCCCGCGTCGCCGCCATCGTCCTCGCCGCAACCCCCGTCCTGCTTCTCGCCGCCTTCCTCCTCGCCCTCGTCCTCGTCTACAGCGAGCCCAACAACAATAATGAGCCCGACCATCTGATTCCGATCAGGATCAGGTCGCGCAATCCCCATGCCCATGACCATGCCTCCTCCTGCACCGCCTCCGGATCATCGGACGACGACGACGACGCCCAAGACTCGGACTCGGAGTCGGTCTCGGAGCCTGCCGATGATGAGAAGGCTGCGGTGTGGACGGCAGAGGACGAGAAAAGCATCCAAAACATCGGCTCGCTGGAGCTGGAGAGGAATGCCGCTGTGGAGAAGCTCATGTCCTCAAGAAGCATGCACCGCTACTACGCCGCCGACCGCGACCTCATCGACCTCGACCTCGACGGCGATGGCGATGGCCACCAGCTGCCCCCCGGCTCCGCTCCCTCCATGCACCGCAACCCCTTCTTCTTCCACGATGACCAACAAGCAGCAGCGTCAACGGCGAAGCTGTTCAGTCGACACGAGAGCTTCAGGCCATACTTCGTCGCCGACAAGACGCAGCAGCCGGTCGTCCTCGAGAGCAGCGGTGGCGGCGGCTCTTCCTCGTCTTCGTCTTCGTCTTCCTCTGCCAGCGGCGACCGTGCCGGCCAGCATATGAAGCAAGAAGCCGTGGCTGACTTTTCCTCCAGCCCCAAGGCCATGGTGGTGACGGTGGATGCAGAGCTCCCCAACCCCAAGTCCATGGTAACGGTGGATGTAGAGCTCATCAGCGACTCCTCGGATGATGACGACGACGACATTATGTCGTTGCCCGGCCAGCAAATAACTAAGGTAGCGAGCAGCATGTCAGACGACGACGATGGGGAATCCTCCTTTGAGGTGGAGAGCATCACACGACAGGGGCCAATTCCTTCCCGTCATCAAACAGACAGACAAACAACCAACACAATGATGATCAATTCTGCCTTAACGGCTGCTTCCTTCCAATCTCCTCCCACTTTCATCAAACTACAAGTACATCTAAGGCCTCAGAAGCGCCGCCTGCAACACCAACAACAGCTTCTGATTGTTGGCAACAACGGGGCAATAACAATAGGAAAGCAGGAGTTCGTGCTAAAGCCTGTACAAGCAACACTAGGGCCAAATTCAACTGGTGGCCGCGGGGGTTCGCCCCTACCCGATGTGATCCAGCAGTTCTACTCCTCCCTCAACGAGAAGGACAGCAAACGTCTTGAAAACCTGATTGCTCCTGACTGTATCATCGACGACAACGCATACTATAAGCTGCTGGACATCAAGAGTACCCAAACCTACTTCAGGAGACTGATGGATGCAATGGGAAAGAATTTCAAATTTGCCATCGATGAGGTTTCTCAAGGAGTGGAACCCACTTTCGCAGTAATGTGGCATCTTGAATGGAATGGTAAAACCATCCCCTTCACCAAGGGCTGCAGCTTCTACATATGTTCAAGAAAAGAAGCAGCACTTGTTATTAGGAAAATTCATATCTTCCAAGAGTCACCAGTGAAACCATGCAAGTTTTCACTGGAAATACTAAATATCGCTACCAACTTGTTTGACACATTCCCGAATATAGCTGAAGGTAGCCAAACAAGAAAGGGGACTGTATGGGGACTACCAATGGATCAGAACTTTTCAGATGATGTCATGTCGTTGCCAGAAGTTTATCTTGTCCATTCTCCTGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MVPVNFGDSSSIPPVDAVVPMAMAPRLLCFLFLLLQLLLFPRVAAIVLAATPVLLLAAFLLALVLVYSEPNNNNEPDHLIPIRIRSRNPHAHDHASSCTASGSSDDDDDAQDSDSESVSEPADDEKAAVWTAEDEKSIQNIGSLELERNAAVEKLMSSRSMHRYYAADRDLIDLDLDGDGDGHQLPPGSAPSMHRNPFFFHDDQQAAASTAKLFSRHESFRPYFVADKTQQPVVLESSGGGGSSSSSSSSSSASGDRAGQHMKQEAVADFSSSPKAMVVTVDAELPNPKSMVTVDVELISDSSDDDDDDIMSLPGQQITKVASSMSDDDDGESSFEVESITRQGPIPSRHQTDRQTTNTMMINSALTAASFQSPPTFIKLQVHLRPQKRRLQHQQQLLIVGNNGAITIGKQEFVLKPVQATLGPNSTGGRGGSPLPDVIQQFYSSLNEKDSKRLENLIAPDCIIDDNAYYKLLDIKSTQTYFRRLMDAMGKNFKFAIDEVSQGVEPTFAVMWHLEWNGKTIPFTKGCSFYICSRKEAALVIRKIHIFQESPVKPCKFSLEILNIATNLFDTFPNIAEGSQTRKGTVWGLPMDQNFSDDVMSLPEVYLVHSPA</aaseq>

Gene Sequence

<dnaseqindica>1..1029#1893..2291#2444..2558#2640..2721#2927..2978#3074..3128#3464..3570#ATGGTTCCGGTGAATTTCGGGGATTCGTCGTCGATTCCCCCAGTGGATGCGGTGGTGCCAATGGCAATGGCTCCTCGGTTACTCTGCTTCCTCTTCCTCCTCCTGCAGCTGTTGCTCTTCCCCCGCGTCGCCGCCATCGTCCTCGCCGCAACCCCCGTCCTGCTTCTCGCCGCCTTCCTCCTCGCCCTCGTCCTCGTCTACAGCGAGCCCAACAACAATAATGAGCCCGACCATCTGATTCCGATCAGGATCAGGTCGCGCAATCCCCATGCCCATGACCATGCCTCCTCCTGCACCGCCTCCGGATCATCGGACGACGACGACGACGCCCAAGACTCGGACTCGGAGTCGGTCTCGGAGCCTGCCGATGATGAGAAGGCTGCGGTGTGGACGGCAGAGGACGAGAAAAGCATCCAAAACATCGGCTCGCTGGAGCTGGAGAGGAATGCCGCTGTGGAGAAGCTCATGTCCTCAAGAAGCATGCACCGCTACTACGCCGCCGACCGCGACCTCATCGACCTCGACCTCGACGGCGATGGCGATGGCCACCAGCTGCCCCCCGGCTCCGCTCCCTCCATGCACCGCAACCCCTTCTTCTTCCACGATGACCAACAAGCAGCAGCGTCAACGGCGAAGCTGTTCAGTCGACACGAGAGCTTCAGGCCATACTTCGTCGCCGACAAGACGCAGCAGCCGGTCGTCCTCGAGAGCAGCGGTGGCGGCGGCTCTTCCTCGTCTTCGTCTTCGTCTTCCTCTGCCAGCGGCGACCGTGCCGGCCAGCATATGAAGCAAGAAGCCGTGGCTGACTTTTCCTCCAGCCCCAAGGCCATGGTGGTGACGGTGGATGCAGAGCTCCCCAACCCCAAGTCCATGGTAACGGTGGATGTAGAGCTCATCAGCGACTCCTCGGATGATGACGACGACGACATTATGTCGTTGCCCGGCCAGCAAATAACTAAGGTAGCGAGCAGCATGTCAGACGACGACGATGGGGAATCCTCCTTTGAGGTGGAGAGCATCACACGACAGGTAAATGAAACTTTGCATGCCCATGCTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCCGCCCGTGAAGGAAGAGAAGAAAAAGAAGAGAAGAACAAGTTGGCATCGATTGAGGAGGACGAGAGGAGGGAGCGCGACGTCTTTCCGTCTCCGTCCCCGTTCCTCCGGCAAACTCTGCCACCATTAATGGCGACGGCGGTGGTTCTCCTCCTCCTGCCGCCACCACCGCCGCTCCCAAAGCAGTCGTAGCAGCAGCCAGATACAAGACGCCCTCCAAGAAGGCAGTCGTAGGTTTCTTCCGAAAATGACCAACTTAATTAATTTTAATTAGTTACTGTTTCTTCTTATTCTTCAATTCAATTCATCTTAATTTAGCCAGCTCAATCTTTTACCATACGTCACTTATAAAGAGGAGGGTTTATAGTATGTCGTAGTACACTGTATGCAACACGTTTGTATTGTAGTACTACGTATGCATGCATATCAGAATATGTACAGAGTAGTACAGTTCAGCAAGCACGTAGGCGACCTTTCTGGCTTCTGGGTCGCAAAGCCAGCTGCGCTGATGATTCTGATTCTTATCTCACCCATGCATCCATCTCTGTTCTGCATCTAATAGAATAGAACCCTTGAAAGCAAGCAAAGAACAAGGAATTATTTAATATTAATGCCTTACTTGATGCATACGTACCTTTGCCTGATACCCCTTTTCCAGCAACAGCAAAACTACCATGCGCAGATTGGCATCCTCTTCCACCGTTTCGTTTGGTAGGCAAGCAAGCAAAAGACAATCCATTCCTGGTTCCTCTCCTTAAAAACCAAACCAAGCGGGCCTATGTTTACTGAAGATTAGTCTTTAACAGGGGCCAATTCCTTCCCGTCATCAAACAGACAGACAAACAACCAACACAATGATGATCAATTCTGCCTTAACGGCTGCTTCCTTCCAATCTCCTCCCACTTTCATCAAACTACAAGTACATCTAAGGCCTCAGAAGCGCCGCCTGCAACACCAACAACAGCTTCTGATTGTTGGCAACAACGGGGCAATAACAATAGGAAAGCAGGAGTTCGTGCTAAAGCCTGTACAAGCAACACTAGGGCCAAATTCAACTGGTGGCCGCGGGGGTTCGCCCCTACCCGATGTGATCCAGCAGTTCTACTCCTCCCTCAACGAGAAGGACAGCAAACGTCTTGAAAACCTGATTGCTCCTGACTGTATCATCGACGACAACGCATACTATAAGCTGCTGGACATCAAGGTTTTACTTGTTCTTCATTCTCATATTACAGACCTACAGTATATAAGCTACAGCATTTTTTAGTCCACTGCTCCATATATATATTGGAAACCGAGCTATCAAGACCTGGTTACCATACTCAAAATTATTCACAGCAACTTCGCTGCATGTAGAGTACCCAAACCTACTTCAGGAGACTGATGGATGCAATGGGAAAGAATTTCAAATTTGCCATCGATGAGGTTTCTCAAGGAGTGGAACCCACTTTCGCAGTAATGTGGCATCTTGGTAAGATACTGTGTAATACAACTCAATAGAAGTGATAAGACAATCAACTTGGATAATGGTATAATTATATTGCTTTTACAGAATGGAATGGTAAAACCATCCCCTTCACCAAGGGCTGCAGCTTCTACATATGTTCAAGAAAAGAAGCAGCACTTGTTATTAGGTAGTTCATATAAATAACTGCTCTTGGGAGATTTTCTTTGTCTATTTCAAAAACAATATTTTTTGTTTCCATGTTTCCTTTGCATTCATGTTAGCTGACTCTTAGAGCTATAATGTTGCAGTGGCTATGCTTCGGTTTAGCCTCTAAATAAATAAAAATAATATTCCCCTTCTGTTACCTCTGATGGTATTCTAACACAATGCAGGAAAATTCATATCTTCCAAGAGTCACCAGTGAAACCATGCAAGTTTTCACTGGTAGGCATGCTAATGAGTTTCTTGTCTATATTACCATACAGTCCAACTGAATCAGAAGTATAACTCTCACTGATGAAATATTCCAATGCTTACAGGAAATACTAAATATCGCTACCAACTTGTTTGACACATTCCCGAATATAGCTGAAGGTACATGCTTCATAGAATCAACTGTTTAGTTTATAATGTTGGTAGCTAAAAAGCAGTCTAAAAATGTTAGTGCACATGCAGGTTTATTAAATAATCCAGAACAAGCAATACAGCCCTTTGTGAGGCTTTACAAGTCCTTCGTGAAGCCTTTCATCGTCCCTTTTCTTGCATACTATACCCACTTTTGGACATACTTGGCTAAAGTATTGACTATGATGCTCCATTTGTTGTATAGAATAATCAAATGGTATGTTTAAAGACTAGAATGACTGAAAAGTCCATATTGTGAAAATAGAAATTATATACGTACCTTATCTGTGCACAAACAATTACAGGTAGCCAAACAAGAAAGGGGACTGTATGGGGACTACCAATGGATCAGAACTTTTCAGATGATGTCATGTCGTTGCCAGAAGTTTATCTTGTCCATTCTCCTGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009386

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009386&oldid=54209"