BGIOSGA009488

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Revision as of 09:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009488| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009488, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009488

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009488, complete gene.

LocusTag

OSJNBA0042I09.19

Ensembl Transcript ID

BGIOSGA009488-TA

Ensembl Protein ID

BGIOSGA009488-PA

Length

3356

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39568833..39572188

Sequence Coding Region

39572058..39572188,39570814..39570903,39570087..39570146,39569839..39569878,39569653..39569746
,39569258..39569317,39569057..39569148,39568833..39568916

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39568833..39572188 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39568833..39572188 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGCGGCGAAGGCGAAGGCGAGCGGCGGCGGGAGGCGGGGAGGAGCCAAGGACCCAACCGACGCGCTCCGCTCCGACAAGAAGCGCCGCGACATGGACGACTCCGACGACGCCGAGCTCGACAGTGACATGAAGGAGATCGTGTTGCTGCTGCGCCAGATCAAGGACAAGGCTCACAAGGATGGCCAGAAGAAGACCGAGCAAACCCTCTCCAGTGTTGCTACAGAAATTCAGACTATCGTACAGGATGCCAAGGGCAAGTTTGAGAAGGAAAGGCAAAATTATCTGAAAGTTCTATCAAAGACTTCAAAAGAGTGTGAAGGTTTACTGAAGAACGAGTACACCAAGTTTCAAGCAACACATGATAAATTCTGCAAAGAAAAAGCTGCACACATGCAAACTCTCAAAGACCTTTTCTCAAAGTTCGAAGATGCAAAGGAGAAATTACTTATCCAGTATGAACTGCAAAGGAAGAAGGAGAAGGCTACTCTGTCTGAACTCGAGAAAACATTTTCAGAGAAGATAACTAATGCAGAAGAATCTCTGAAGAAGATGAAGCAGGATGACAAATCCATTGTCAACCTTCGCAAGTCCATTGGCTCATTCCTGGACCCGGATGATGAGTTTGGAGCAGACGATGACTGA</cdnaseq>

Protein Sequence

<aaseq>MSAAAKAKASGGGRRGGAKDPTDALRSDKKRRDMDDSDDAELDSDMKEIVLLLRQIKDKAHKDGQKKTEQTLSSVATEIQTIVQDAKGKFEKERQNYLKVLSKTSKECEGLLKNEYTKFQATHDKFCKEKAAHMQTLKDLFSKFEDAKEKLLIQYELQRKKEKATLSELEKTFSEKITNAEESLKKMKQDDKSIVNLRKSIGSFLDPDDEFGADDD</aaseq>

Gene Sequence

<dnaseqindica>1..131#1286..1375#2043..2102#2311..2350#2443..2536#2872..2931#3041..3132#3273..3356#ATGTCGGCGGCGGCGAAGGCGAAGGCGAGCGGCGGCGGGAGGCGGGGAGGAGCCAAGGACCCAACCGACGCGCTCCGCTCCGACAAGAAGCGCCGCGACATGGACGACTCCGACGACGCCGAGCTCGACAGGTGCCTAGCTAGCAGCGCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAATCCTTTTGTTTATTTAGCCGTGTAAATTGGCGCCGATTTTCGCTCAACCTTTACTGGGTCCACATGATTCTGGTGTGCTTTATCCTCTAAATGATTTTATGGTGTCAAGTGTCAACCATAGTTTTTTGCTTGCATAGTTTTGCGTTAGACTTCTCTAACATGGTTTGTTTTTCCAATGCATTTCCTCAAAAACGCTTATGTATCCAAAATTTTGCTCACACTCCATTCTTAACTAAGAAATTTTACTCACGGGTGAAATTTGCTTCTGGCAGAATGATGAATTCATCGATATGATATATCGGGAGTTCGTGAAGAGACAGTTACCTTGAGGAGACTGTCACTACCACAGGCTTTAGTTTGTGTAATTGTGTTTTAGGTAGGCCATTTTTTTCAAAGCCTGTAGACTAACGTACGTGCATTTGACATACCAAAGGTTAGCATAGTTTAGGTCCAACTATCGACTAGTTTTGAGCAGTATTCTCGGAGCAGAAAAAGTCTTGCTCCAAATACCAGAAAGGCAGAAACCTTGCATTTCGCCTAATACCAACTGGAATAGTTTTTGCACGTTTTTGTAACGGCCTGTTTTTGGGCAGCTAGTACCATTATTTTTGGATATTACTCCCCCCGTTTCACATGTAAGACTTTCTAGCATTGTCCATATATATATATATAGATGTTATATATGTTTAGATTCATTAATATCTAAATGAATGTAGGAAATGCTATAATGATTTATATCGTGAAACAGAGAAAGTATTAGTCTTAGATAACCCCATTACCAAGCCATGCATAGGCGATTTAAGCTCCTTGACGCGACGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCTCGCCTCCCCTTCCCCCTCCTCCCCGGGGTCCCCGCGCTATGTTCGGATCGAACTCGAAGCGAGGGTTTCCTGGTTGCTCTCCCGCTTGCCGCGATTTTGTCTTAATTTTGCGCCGGATTTTTGTGCGATTAACCGATTTTCTGCGTATGCATTTCGTGATTCGTGACGTGCTTCGGTGGGGATCGGGGGAGGCAGTGACATGAAGGAGATCGTGTTGCTGCTGCGCCAGATCAAGGACAAGGCTCACAAGGATGGCCAGAAGAAGACCGAGCAAACCCTCTCCAGGTGATTCCGAGTCCCACCCTTTTTACGGCGGCTTTATTACCATGCCAATTGGTATTGTAGATTACACGCGTGAAATTGTTTCTAAGTTTTCTATTAGTGCTAATTGAGAGATAATTTAACGTGCTTACTGTTAGATATCAACAGATGGTGCTCACTAGTCACTATGCACCACACTTGCTTAATTTCTGCAGAATTGTGCTCAAGTCTCTATACACCAATGATCTGTTATGAGTTCCGTTGTGTTGACCAGCAGTAGTTGGTCCACGTCACTTTAATTTCTGTGGAATTGTGAACAGATCACCGTTTAGGTCTCCTATCTTTTATGAACCAATGATATAGTAGGATGTACCAGTGTGCCAACTGCTTATTGTTCAACTTATCTCCTGAATCCGATTTTTTTTTACTGTATAAGTCTGTGTGAGCCTTGGAGCTCCTGTAGGCTATACTCAATGTAGCAGATGTGAGGCGTAGAGTGCGTTAATTGAATCGCTCCCAAAGCATGGAAAATGAGTTGAGACTAGTGATGTGGAAGAATAGCTTCATCTAACATGGTTTTCATATCCACATGACAAAATTAATATGGTGTCTCAATGTGGTCTGTTTCTGAAGTTATCTACCACGTGCATAATATTAGATTACATGACTAACTGTTCTGCTCAATTTTCAGTGTTGCTACAGAAATTCAGACTATCGTACAGGATGCCAAGGGCAAGTTTGAGAAGGAAAGGTAAAGGACCAATTCATTTTACTTGCCTGTGAACTTCTACTTGTATGAATGCAGTTCTTTTTTGTTGTACATCTGTGGTGAGATTTAAAGTGGTTTTTGATTCATTCCTATAACATGATTATCATATGAAGCTTTCTTGGAAATGATTACGGTGCATCATTCAAATATACTATGAATTCTGACAACTGTTTTTTATTTGCATTAGCAGGCAAAATTATCTGAAAGTTCTATCAAAGACTTCAAAAGAGGTTACCGACCTGTATCCAATGCAGTGATGCTCATCTGGTAACAATCCCCTCATAGTTTGTGCTAATGTCAGCTTCATTTGTATTTGATGTAGTGTGAAGGTTTACTGAAGAACGAGTACACCAAGTTTCAAGCAACACATGATAAATTCTGCAAAGAAAAAGCTGCACACATGCAAACTCTCAAAGGTATGTCAAATGAGCTACCTGCAAACACATTTACTTAGAAGTGAGTTTTGCTGTTTGTTTCCTGTGCTATTAGGTGAATTATATAGGTGAACTTTGTGCAAGGAAAAACTGTCATATTTTATCTTGAGATTTGGTACCAGGATTATTGTACTAGTTAACCTTGACCTTTGTTTTCTTTTGTACAAAAATGGAGCGATATCATTAAATAATACTCATAATGAGCAATGTGCATGCACCTTGGCAGTTTCCTGACTTCATTAGTTCCTGCCACATAGATATCATCAGTTGTCACCTGTTATCAACCTATTTACACATGCATATACTGTGTTCTGCAGACCTTTTCTCAAAGTTCGAAGATGCAAAGGAGAAATTACTTATCCAGTATGAACTGCAAAGTAAGGATATATCATTTTCTATCTCATTGTAAATGTTCTTTATTCTTAACCAGTGTCTCTTAAACAGTTACCATGTGTGAAAGACATTTGTTCTGATCTTGTCTAACAGGGAAGAAGGAGAAGGCTACTCTGTCTGAACTCGAGAAAACATTTTCAGAGAAGATAACTAATGCAGAAGAATCTCTGAAGAAGATGAAGCAGGTTCCGTCATTTAATGGCTTACATGATCTACTATAATTTCTTGTTTCTGTTGATACTTGATACCATGTCTCATAGTCCAAGTTAGAATTGATGTGTCCTGATTTTCTTACTCGCAAGTACTTCTCTTTGTGTGTTTGCAGGATGACAAATCCATTGTCAACCTTCGCAAGTCCATTGGCTCATTCCTGGACCCGGATGATGAGTTTGGAGCAGACGATGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009488