BGIOSGA009588

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Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009588| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009588, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009588

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009588, complete gene.

LocusTag

OSJNBB0033J23.10

Ensembl Transcript ID

BGIOSGA009588-TA

Ensembl Protein ID

BGIOSGA009588-PA

Length

2705

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38325404..38328108

Sequence Coding Region

38327551..38328108,38326526..38327066,38326070..38326170,38325915..38325995,38325699..38325826
,38325404..38325566

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38325404..38328108 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38325404..38328108 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGGCATGGCAACCCTCCACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGAGATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCATCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACCTCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAAAGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAAAGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGATCCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAGTAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAAGTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGATTCTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTCGCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATGGTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAGCTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCGAAGACGAAGCTTCCGCTCTGCAGCCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACATGCTGA</cdnaseq>

Protein Sequence

<aaseq>MEGHGNPPLNAAEAVLKRPRSVASRKPRSKEQLISEFKDLSCTPSRSISPEDDAGVEGSGHRRKELYLNGPEARGSVPHRSDASRKIKRDDNRAAGDHDEQNKSSKSKDGKHTSEGVLALACTRNSGSPDGQHLPPKDTTSMPGLRKVKLKVSGITRPLHTKNIQEASDGGTLGTSDGSSQRHKQKDSGGHKHHQDKHDVSPSSDLVRKSKRIPKKRTLDGDSGDEDGGSGYLVKFKIAKVVPEQSIATDHAGEYDESLEDDIKKKRLSKVSKNKSLPYEVDEDFTMYRSGRDGRKKLKLVDSDDFIEEEPEMDEPKKRLSEADSHSDVKNETTGLITRQRALQGRGGNGETLIEFPDGLPTASSRRQKDKASEVEAQAKKAEAAQRRKLQVEKAEREQQAEAVRKILGIDIEKKKEERKQKERDEKEKQEKTEEYRRNCIQCVMGPEGTVVTFPDKMGLPSIFDSKPISYPPPREKCAGPSCTNPYKYRDSKTKLPLCSLQCYKAVQGSSEAAQGSSETLTC</aaseq>

Gene Sequence

<dnaseqindica>1..558#1043..1583#1939..2039#2114..2194#2283..2410#2543..2705#ATGGAGGGGCATGGCAACCCTCCACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGAGATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCATCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACCTCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAAAGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAAAGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGATCCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAGTAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAAGTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGTTTGTTATCTGCATTTAATTGGGGAAGGAAATTGTGTGAAATTGTGGCCTTCTCGTGTATTCAATGCTTTACCTTATTTTGTTGCAATAATCATATCTTCACAATTTCATGTGAACTGATCTTTGATTTATGCATGGGTCTTGTGGAAGATGTGTCCACCCATCGCTTAAATTTCTCATAAATGGTGCATGAGATGCTTTCACTCATCACTTCTTACTGCAATGCTATTTTTGAAAGCTTGAATCACTTAGTCACCGTGCATTTTTTGCCAATATGCAACTAAGATTGATACAATTATAACCTAGATATTGCACTGGGTGTTCATTATTGTCATTTCACTGCACCATGTTAGTGTCTCTTTTTATGGTTGCCCATGACTTTTCAACATCCACAAGTAATTAATGGTATAATATAATTGGCAATTTCACAGCTGAGCTTTTAATTCATTTTGAGTTCTAAGATAGTCCCATCTTTTGTTTTTAGGATTCTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTCGCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATGGTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAGCTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGTATAATCTCTAGCTTATATATGTACTCCCTCCGGGTTGATAATACTTGTCGTTTTGGACAAGAGCACGGTCTCCAAAAAGTAACTTTGACAACTATTTTCTATTATAATATATATAGAAATATCAACAAATATATAATTTTATTGAAGTACTTTTTAAGGCTAATCTACACATATGATTTTCATATTTTTAAGATAAATATTTTAGAAATTATTTGTAGTCAAAGATTTTAAAGTTTGACTTTACCCTTGTTAAAAACGACTAATATTATCAGTCCGGAGGGAGTAGCTATTTATTGACATTAATGTGTTGCCTTAGATCTGATACTAAATGCCATTGTTAATTACTACTACAGGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGTTAGCCTAGTCCCTAAGAGTTTCCTAGTTTTTCGCCTTTTGCGTAGCCAAGCTTACTAGCTCCTACTGTACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGTACTATGCCATAAGTTTTTATTGTTGCTACATTTCTGTTCATGGTACAGTAGACTCATTTTACCCTTCCTCTCACCTTTTTTTCCAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGGTTACATATAGTACCCCATCTGTGCATCTTTTAAGTTTTTCCAAGTTTACGTCAAGCATAGAATCCATGTATTGATCCATTTTGAAGTTATGCATTTACATTCAACTCCATTTGCTTTATCCATCTTCCCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCGAAGACGAAGCTTCCGCTCTGCAGCCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACATGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009588