BGIOSGA009855

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Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009855| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009855, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009855

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009855, complete gene.

LocusTag

OSJNBA0027J18.8

Ensembl Transcript ID

BGIOSGA009855-TA

Ensembl Protein ID

BGIOSGA009855-PA

Length

4241

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34318562..34322802

Sequence Coding Region

34322620..34322802,34322366..34322479,34322084..34322257,34321883..34321975,34321504..34321587
,34321365..34321420,34321114..34321207,34320853..34320965,34320567..34320639
,34320286..34320366,34319917..34320003,34319572..34319676,34319371..34319477
,34318907..34318967,34318562..34318663

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34318562..34322802 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34318562..34322802 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCTGCGGGTGGCCGCCCCGGCCTCCGTGGCCGCGGCGGCGCGGTGCGGCACGAGCCTGGCGAGGCCGTGGCCTGCCCGGGCGGTGGGAGGAGGAGGAGGAGGAGGAGGACGGGGCCGGCGTCTCTCCGTGCGGACGTCCGTCGCGACCACCGAGGCCGCCGCCGCCGCCGTGGGCGCCTCGGAGGACGCGGCGCTGGAGGCGCGGGACTCGAAGACGGTGGTGGCGGTCATCCTCGGCGGCGGCGCGGGGACGAGGCTGTTCCCGCTCACCAAGCGCAGGGCCAAGCCCGCGGTGCCCATTGGCGGAGCGTACAGGCTGATCGACGTGCCGATGAGCAACTGCATAAACAGCGGCATCAACAAGGTGTACATTCTCACCCAGTTCAACTCCGCGTCGCTCAACCGGCACCTTTCCCGGGCGTATAACTTCAGCAACGGCGTCGCGTTTGGAGATGGATTCGTCGAGGTCCTAGCAGCAACTCAGACGCCTGGATCGGAGGGAAAGAGGTGGTTTCAGGGTACAGCTGATGCTGTTCGGCAATTTGACTGGCTTTTTGATGATGCCAAAGCTAAAGACATCGATGATGTGCTGATTCTTTCTGGTGATCATCTCTACCGCATGGACTACATGGACTTTGTTCAGAGTCATCGGCAAAGAGGTGCAGACATCAGCATCTGTTGCTTGCCTATTGATGATAGCCGGGCATCTGATTTTGGTCTAATGAAGATAGACGACACAGGAAGAGTTATCGCATTTAGTGAAAAACCAAAAGGAGATGATTTAAAGGCAATGCAAGTTGACACCACTGTTCTAGGCTTACCACAGGATGAAGCAAAAGAGAAGCCATACATAGCGTCAATGGGGGTTTATATATTTAAGAAAGAGATACTTCTAAATCTTTTGAGATGGCGTTTTCCCACAGCAAATGACTTTGGATCTGAAATCATTCCTGCTTCAGCAAAAGAAATCAATGTAAAGGCATATCTTTTCAATGATTACTGGGAAGACATAGGAACTATAAAATCATTCTTTGAAGCCAATCTTTCTCTTGCTGAACAGCCACCGAGATTCAGCTTTTATGATGCTAATAAACCAATGTACACATCACGGAGAAACTTACCGCCATCTATGATCAATAATAGTAAGATCACTGATTCAATCATTTCCCATGGATGTTTCTTGGATAGCTGCAGGATAGAGCACAGTGTTGTTGGAATCCGTTCTAGGATAGGTTCCAATGTGCACCTCAAGGATACAGTAATGCTTGGTGCTGATTTCTATGAGACTGATCTGGAAAGAGGAGAACTGCTGGCTGAAGGAAAGGTTCCTATTGGAATCGGGGAGAATACAAAGATTCAGAACTGCATAATAGACAAGAATGCGAGGATAGGGAAGAATGTAACAATTTCCAACTCTGAGGGTGTACAGGAAGCAGATAGGACCTCTGAAGGCTTCTACATCCGATCAGGCATCACCATCGTATTAAAGAACTCGATAATTGCAGATGGATTAGTCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MDLRVAAPASVAAAARCGTSLARPWPARAVGGGGGGGGRGRRLSVRTSVATTEAAAAAVGASEDAALEARDSKTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWLFDDAKAKDIDDVLILSGDHLYRMDYMDFVQSHRQRGADISICCLPIDDSRASDFGLMKIDDTGRVIAFSEKPKGDDLKAMQVDTTVLGLPQDEAKEKPYIASMGVYIFKKEILLNLLRWRFPTANDFGSEIIPASAKEINVKAYLFNDYWEDIGTIKSFFEANLSLAEQPPRFSFYDANKPMYTSRRNLPPSMINNSKITDSIISHGCFLDSCRIEHSVVGIRSRIGSNVHLKDTVMLGADFYETDLERGELLAEGKVPIGIGENTKIQNCIIDKNARIGKNVTISNSEGVQEADRTSEGFYIRSGITIVLKNSIIADGLVI</aaseq>

Gene Sequence

<dnaseqindica>1..183#324..437#546..719#828..920#1216..1299#1383..1438#1596..1689#1838..1950#2164..2236#2437..2517#2800..2886#3127..3231#3326..3432#3836..3896#4140..4241#ATGGACCTGCGGGTGGCCGCCCCGGCCTCCGTGGCCGCGGCGGCGCGGTGCGGCACGAGCCTGGCGAGGCCGTGGCCTGCCCGGGCGGTGGGAGGAGGAGGAGGAGGAGGAGGACGGGGCCGGCGTCTCTCCGTGCGGACGTCCGTCGCGACCACCGAGGCCGCCGCCGCCGCCGTGGGCGCCGTCAGTGCACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATATATATATATATATGCGCGCGCGCGGTGCTTGATTTGTTTTTCGTGGTGTTGCAGTCGGAGGACGCGGCGCTGGAGGCGCGGGACTCGAAGACGGTGGTGGCGGTCATCCTCGGCGGCGGCGCGGGGACGAGGCTGTTCCCGCTCACCAAGCGCAGGGCCAAGCCCGCGGTGAGTACAGCGTACAAACACCTTAGTCCCGTCGCGGTTTCTTCCGCCGCAAAAGATTCAGCAAATGCGAGTAAATTGTCTCATGGTTGTTAATTTTTGCCATTGCAGGTGCCCATTGGCGGAGCGTACAGGCTGATCGACGTGCCGATGAGCAACTGCATAAACAGCGGCATCAACAAGGTGTACATTCTCACCCAGTTCAACTCCGCGTCGCTCAACCGGCACCTTTCCCGGGCGTATAACTTCAGCAACGGCGTCGCGTTTGGAGATGGATTCGTCGAGGTGCTAAATCCAGACAGTATAATGTTCTTCTTTACGGGATTGTGCTACTGTTAATTTGGTGATCTGATGAAAAGGGATAACAAAAATGGAACTTGCTCTCTAACTCAGGTCCTAGCAGCAACTCAGACGCCTGGATCGGAGGGAAAGAGGTGGTTTCAGGGTACAGCTGATGCTGTTCGGCAATTTGACTGGCTTTTTGATGTACGTTTTTTTATCAGATATTTGAGATGTGCGATGCTTACTTTTATCATCGATATGGAGCACTATAGCCAATGCAGTGACTAGAAGTCATCTATGTTTAACTCTTTACTGCGCCTTCTGACTTCTGTTGCATATTTGTGTGTTTAGAATCATTCGTATCTGTTTACAGTGGTTCAATTTGAGGAAAATCAAATGAACTTTTCAATTATCCCTTGTTATTTGATCGTACTATTCTACTGAAAAACCTCATCATGCTCCTTACATAATTTTAATGCATCGTGCTATCGTTTTGTAGGATGCCAAAGCTAAAGACATCGATGATGTGCTGATTCTTTCTGGTGATCATCTCTACCGCATGGACTACATGGACTTTGTTCAGGTAATTGTCTGTACATACATCATTTCTTGTAGTTGGCTGTTAAAGTAGTATATTTGAATTGATTTTGGGTATCCAATTTACAGAGTCATCGGCAAAGAGGTGCAGACATCAGCATCTGTTGCTTGCCTATTGATGATAGGTGATTCCTGTACCATTTCAGTAGCTTCATCCATGAACAATGAAGTGACCTCTCATACCAAGTTTTAGATAAATTGAATTGTTTTATTTGGTAAGAGAAATATTTGGATTTTGAAAATACACTACTCTCTTTCATTTGTTTATTTCGTCCTTGTCAGCCGGGCATCTGATTTTGGTCTAATGAAGATAGACGACACAGGAAGAGTTATCGCATTTAGTGAAAAACCAAAAGGAGATGATTTAAAGGCAATGGTAGGTCATATATGTTTATTCATACCACTCATCTGTCCTATGTACATATTGGAATCATATTCTAGATGGCCCAATGCACCAGTTAGTGCTGCACACAAAGAAAATAACTGATAATTTCATCAGACATTCTTTATTTTTCTTTGTGCAGCAAGTTGACACCACTGTTCTAGGCTTACCACAGGATGAAGCAAAAGAGAAGCCATACATAGCGTCAATGGGGGTTTATATATTTAAGAAAGAGATACTTCTAAATCTTTTGAGGTATGCCAATTCAACTCAATGGAGCTCACATAAAAATTCAGTAAAATGCTCCATTTAATCATCTGACTATAAAGTGTACTTTCATTCTAATGCCAAACCTCAATTTCAGTGATGTCAATAGTATAATAAACAAACCAGCTTTTTTGTTCTTCTGTTTATGTGGTATTGATTGCTATCAGGTCTTAATCTTTACCGCAATTGTTGTTAGGTCAGATGGCGTTTTCCCACAGCAAATGACTTTGGATCTGAAATCATTCCTGCTTCAGCAAAAGAAATCAATGTAAAGGTAAGGATTTAACATAATAAGTTCCATTTGGTAGTGTTCTCTAATATTGCACTATTGGCATCAGATTTACACAAATTTATTCAATAATAATACTGCATATGTATGATGTATTATTTATTTTCTTACAATCAACTTCAGTATCATGTCAGAAACTAGCCTTGAACATCTCAGGCACAGTTGTAACCTAGAACTCATTGCAGGCATATCTTTTCAATGATTACTGGGAAGACATAGGAACTATAAAATCATTCTTTGAAGCCAATCTTTCTCTTGCTGAACAGGTATGCTTTACTAATACAAAATTGCCATTTTATCCGTATTCCTGCAGTTTATATCCCTCTAAGAAATATGTAACTGTACACACTGCAAATTGATACTTTATGTTCACCATCCTTCTAGCAACTCCTGACTTCCTTTTCCCCACCGTATTCATTTATGTTATTAACTTCTACGTATAGTATCATGATGGTGATAGTACTACATAGGTACGAAATTTTCTTTTTAAAACAGATCAAATGAAAACTCTCTGTAACTTTTGATCATTTTTGAATTCACTTATGCAGCCACCGAGATTCAGCTTTTATGATGCTAATAAACCAATGTACACATCACGGAGAAACTTACCGCCATCTATGATCAATAATAGTAAGGTATGTGATACCCTATCTGAACTAGCATGTATCCCTTTCTGTGATATTTTAGTTCCCAAATATTCCTTATGTCACTTTCGACGCATGTATCCAATTAGCAATTCATTTAATCCTGGTTATGTGCCTTTGCTCACTTAGGGAAGTTGCTTATTAATATTAAATTTAGAGGGTTCCTTTACCCTTCTTTTAAAATCAATTCGGTTGGCTTGCCATCTTCTAACACTGTTTAAACCATTGCAGATCACTGATTCAATCATTTCCCATGGATGTTTCTTGGATAGCTGCAGGATAGAGCACAGTGTTGTTGGAATCCGTTCTAGGATAGGTTCCAATGTGCACCTCAAGGTCAGATATTTTCATTTTCACTGCTAGAAGCATAAAACACCAACGGAATGGCCTTCCAAATTACATAAAATATTTCTGTTCCATTGTCCTGCAGGATACAGTAATGCTTGGTGCTGATTTCTATGAGACTGATCTGGAAAGAGGAGAACTGCTGGCTGAAGGAAAGGTTCCTATTGGAATCGGGGAGAATACAAAGATTCAGTATGCATGCAAATTTACTTCCTAGCTTGTTGGCCCAATAATATAATAATATAATACTCCCTCCATCCATAAAAGTTACACCTATTTTACTTTTGAGTTTTTCTAAATAAGTTGTTTCTATTTGTAGTATTTGTGCATTTAATACTTAAACGAAGAGATAAATTAAATATTTTATTAGAACCCAAGGAGTCATCTAAATACTCATTGGTTACATGCTTGCATTTACTCCTTGATTTTGTAATATCCAAGGTGATTTAATTTCTCCTTGGTCTTGGTGTCAAAAGTAATATATGTAACTTTTGTGGATGGAGGGAGTACATCACTTTTACATGTTTGTCTTGGTTATCAATAGTTCAAAAAAAATTATTTTACTCATAGTGTGTCTCATTATTGTCCTCTGAAGGAACTGCATAATAGACAAGAATGCGAGGATAGGGAAGAATGTAACAATTTCCAACTCTGAGGTATGCATTATCTCTATTACCCCTTCTAACATGCTTCTATGTTTTTTTTCCCTGAAACCCGTTTCTATTGTCGAAAATAGTTCTATAACTTGATCAACACTAATAAAAATCACAAAGTACCGAGAAACACGCAGGGGTATTCCGGCTAGCTCCACAAGGTGGTGGGCTAGACGACCTAGGTTCGAAGCCTCACCTCTTCTAATTATTTGATATTGTGGTTGTCTGTTGGGTCTTAAATTTCAGGGTGTACAGGAAGCAGATAGGACCTCTGAAGGCTTCTACATCCGATCAGGCATCACCATCGTATTAAAGAACTCGATAATTGCAGATGGATTAGTCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009855