BGIOSGA009959

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009959| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009959, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009959

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009959, complete gene.

LocusTag

OSJNBA0004L11.3

Ensembl Transcript ID

BGIOSGA009959-TA

Ensembl Protein ID

BGIOSGA009959-PA

Length

3538

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32453480..32457017

Sequence Coding Region

32456906..32457017,32456544..32456689,32456254..32456388,32456080..32456134,32455877..32455995
,32455294..32455382,32455113..32455194,32454903..32455001,32454720..32454798
,32454460..32454579,32454245..32454354,32454088..32454157,32453941..32454004
,32453480..32453645

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32453480..32457017 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32453480..32457017 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTGGGAGGAGCAGCTGCGGGACGAGCTCGCCGGCCGAGACCTCGCCGTCGCCTCCGTCCCCGGGAAGGGCCGCGGCCTCTTCGCCGCACGCAGCTTCTTCCCAGGAGAAGTCGTTATTTCGCAAGAGCCTTACGCTTCTACACCAAACAAGATTTCTGTGGGCTCCAACTGCGACAATTGTTTCGCCTCCAGAAACCTGAGGAAGTGCTCCGTTTGTCGAGTTGCTTGGTACTGTGGGAGTGCGTGTCAGAGAGAAGAATGGAAGCTTCATCAACTTGAATGTCGAGCAATCGCCGCGCTTACAGAGGATAGAAAGAAGATGCTTACTCCCACAATTCGTTTGATGGTGCGGCTTGTACTTAGAAGAAAACTGCAGGATGACAAGGCTATTCCATCTTCAGGAACAGATAACTACAATCTAGTGGATGCATTAGAATCCCACATCTCCGAGGTTGATAAAAATCAACTGGTTTTATATGCTCAGATGGCCAATCTTGTCCAACTGATTCTTCCTTCATTCGAGCTTGATCTTAAGGAAATTACACATACCTTTTCCAAGTTTGCCTGCAACGCTCATACCATATGTGATCCTGAACTGAGGTCCCTTGGGACTGGACTATACCCTGTTTTATCTATTATTAACCACAGTTGTGTACCAAATGCAGTTTTGATATTTGAAGGTCGGACAGCATATGTTCGTGCATTGCAACCTATAAGTAAAAATGAGGAGGTATCAATAAGTTACATTGAAACTGCGGCAACCACTATGAAGAGACAGGACGATCTCAAGCACTACTACTTCACTTGCACATGTCCCCGTTGTGTTAAGGATTCTGAGGAAGATGCGCTCCTTGAGGGATACAGATGCAATGACCAAAAGTGTGATGGATTTCTTCTGCCTAATGCAGGAAACAAAGGTTATACATGCCAGAAATGTAGCACTTCTAGAGATGGGGAAGAGTTACAAAAGATGGCTAGCGATGTACTACTATTATCTGACAAAGTCTCTTCCTTAGTTTCATCTGGAATAGATAACAGTGAGGTAGGTTCTATGTACAAGACCATTGAAGAGCTAGAGCGGAAGCTTTACCATCCTTTGTCAATCACTTTGCTTCACACACGGGAAACACTCTTGAAGATATATATGGAGTTACAAGATTGGCAGACTGCATTGATGTATTGCAGATTGACAATTCCAGTTTATGAAAGAATTTACCCACCTTTTCACCCAATGATTGGATTACAGTTCTATACTTGCGGAAAGCTTGAATGGTTGCTTGAGTACACAGAGGATGCTCTGATGTCTTTAACCAGGGCAGCAGATATACTTCGCATAACGCATGGGACTAAATCCGAGTTCATGAAGGAACTTTTGGGCAAGCTAGAAGAAGTAAGGGCTGAAGCTTCTTTTAGGCTCTCGGCTGGAGATGAACAATAA</cdnaseq>

Protein Sequence

<aaseq>MASWEEQLRDELAGRDLAVASVPGKGRGLFAARSFFPGEVVISQEPYASTPNKISVGSNCDNCFASRNLRKCSVCRVAWYCGSACQREEWKLHQLECRAIAALTEDRKKMLTPTIRLMVRLVLRRKLQDDKAIPSSGTDNYNLVDALESHISEVDKNQLVLYAQMANLVQLILPSFELDLKEITHTFSKFACNAHTICDPELRSLGTGLYPVLSIINHSCVPNAVLIFEGRTAYVRALQPISKNEEVSISYIETAATTMKRQDDLKHYYFTCTCPRCVKDSEEDALLEGYRCNDQKCDGFLLPNAGNKGYTCQKCSTSRDGEELQKMASDVLLLSDKVSSLVSSGIDNSEVGSMYKTIEELERKLYHPLSITLLHTRETLLKIYMELQDWQTALMYCRLTIPVYERIYPPFHPMIGLQFYTCGKLEWLLEYTEDALMSLTRAADILRITHGTKSEFMKELLGKLEEVRAEASFRLSAGDEQ</aaseq>

Gene Sequence

<dnaseqindica>1..112#329..474#630..764#884..938#1023..1141#1636..1724#1824..1905#2017..2115#2220..2298#2439..2558#2664..2773#2861..2930#3014..3077#3373..3538#ATGGCGTCGTGGGAGGAGCAGCTGCGGGACGAGCTCGCCGGCCGAGACCTCGCCGTCGCCTCCGTCCCCGGGAAGGGCCGCGGCCTCTTCGCCGCACGCAGCTTCTTCCCAGGTAAACCCAACCCCCCCTTCTCTGATCGAAAGGCGGGCGCTGTGCCATGGTGGCCAAGCAAGGCAGGGGGCGGCTGCTCGCGAACCGCTCGGCGAAATGCCCAGGCGGAAGGCTTGAGGCCATCCCTAGTGGATGCTGCTGCAATGCGGTTTCATTGAGTTGGGATTATGGTTCCTGTTGCCGCGATGATGATGATGGGGGGTTCTGCGTCTGCAGGAGAAGTCGTTATTTCGCAAGAGCCTTACGCTTCTACACCAAACAAGATTTCTGTGGGCTCCAACTGCGACAATTGTTTCGCCTCCAGAAACCTGAGGAAGTGCTCCGTTTGTCGAGTTGCTTGGTACTGTGGGAGTGCGTGTCAGGTGCTGACTCTGTCCTTCAACTGTTACACGCATTTGATATGCAGAGACTTGCTTTTGTGATCATGTGCTGTGCGGAGACTGTTACATGCATTATTTATAGTGATTCCTCTTGCTTTCAATGGTGTAACTTTTTTGGCGATATGTTGCTACCGCAGAGAGAAGAATGGAAGCTTCATCAACTTGAATGTCGAGCAATCGCCGCGCTTACAGAGGATAGAAAGAAGATGCTTACTCCCACAATTCGTTTGATGGTGCGGCTTGTACTTAGAAGAAAACTGCAGGATGACAAGGTATTGTCTAGTTGATTGATGTAAAAATATAATGCATCATGTCAATGATGATATTTTTGTATACATGGCATGTTGAAGTTTTCTGCATGTTGGTAACTTGATATTGGTTGTTTTGCCAGGCTATTCCATCTTCAGGAACAGATAACTACAATCTAGTGGATGCATTAGAATCCCGTATCCTTCCCTTTTGATACATTTGATCCATGACAAATATATTGACTTTGATTTTGTGAATGTTTTATTGACCGCATAATATAGACATCTCCGAGGTTGATAAAAATCAACTGGTTTTATATGCTCAGATGGCCAATCTTGTCCAACTGATTCTTCCTTCATTCGAGCTTGATCTTAAGGAAATTACACATACCTTTTCCAAGGTAATGCTCCTCAAAGTCATAAGGTTATTAGTATATGCTACTTTTATAGCTTAAAAAATGTTTTAACTACTATAGAAGACAATGTATCCAATGAATAATTGAGCTTAAAAAATACAGTTGTTTCCTGGTGTTATTTTTGAGATTTTGCTTGTACCTTCCATCTAAAACCTATTGGGACCTAGTTGGATGTGATTAATTTTGTTCCAAACCATGAGGATCCAAGTTATCTAGGACACCTCCCTGTGGTCTTATACTCTTATTTGAGTATAGTAGAATCGTGTCTTGAATCTGCCTTTTGAAAAATAAACCAGAATAAGCCAAGAAGCTTTGGAAAAAAAAAGAATAATTGTTCTGTCCATGTTTATTCTTCCGTTTTTCATATTTGTTGTCTTCCAGTCTCACCCTTAAGCAGTGGCTAGGACTATTTTGGTGATTATCTGGCTAGACCTTTAGAAGTAAGCATGAATAATATATCCTCTGCCTCATATGTGCAGTTTGCCTGCAACGCTCATACCATATGTGATCCTGAACTGAGGTCCCTTGGGACTGGACTATACCCTGTTTTATCTATTATTAACCACAGGTGATATACTATTCCTTTATTCATCGTTTAGCATCTTCCTCCGATTTTATCATTTAATAAATAATTATTATTGCATCTACCCTTTCCTGGTATACTTAGTTGTGTACCAAATGCAGTTTTGATATTTGAAGGTCGGACAGCATATGTTCGTGCATTGCAACCTATAAGTAAAAATGAGGAGGTAATGAATATACTTTTGTTTTTTTCCTTATTATCATATATTCCTCTGCTTGCAATCCATGTTTCTTGGGGTTTCTTCTCTGGGCAATGTCAGTTACGCATCTTTGGTTAGGTATCAATAAGTTACATTGAAACTGCGGCAACCACTATGAAGAGACAGGACGATCTCAAGCACTACTACTTCACTTGCACATGTCCCCGTTGTGTTAAGGTTTTTGATTTCATTGCTTACTATTCTTGGATGTCCTATGGGAAGCTGACACATTCTTGATAATGAAGTGTTCTCTAGCTATAATTTTTTCCCCAACCTTACAGGATTCTGAGGAAGATGCGCTCCTTGAGGGATACAGATGCAATGACCAAAAGTGTGATGGATTTCTTCTGCCTAATGCAGGTTGGTTAACATCACGAAGGAAAAATACTAACTGAAGAGATGTAATAGATTGGATTATTCAAACATAATGTCAGCTGCAGCTTTAATACTGTTTCAGTTATCATTGATCTTACATTTTTATCTGGATTTAACATCTGTAGGAAACAAAGGTTATACATGCCAGAAATGTAGCACTTCTAGAGATGGGGAAGAGTTACAAAAGATGGCTAGCGATGTACTACTATTATCTGACAAAGTCTCTTCCTTAGTTTCATCTGGAAGTATCCTTTTTCACTATTACTAGATGCTATCTGAGGCAAATGTATATAATTGATTGCATCATATTGTTTTGTGATTTTGTAAAATGCTACCTTAACTTTGGGCAGTAGATAACAGTGAGGTAGGTTCTATGTACAAGACCATTGAAGAGCTAGAGCGGAAGCTTTACCATCCTTTGTCAATCACTTTGCTTCACACACGGGAAACACTCTTGAAGGTATATTTTCAGCATTAACAGTAAAAATAACCTGCTAGGGTACAGAGCACACCATCTAGTATGATTAACCACCTATTATTTGTGCAGATATATATGGAGTTACAAGATTGGCAGACTGCATTGATGTATTGCAGATTGACAATTCCAGTTTATGAAAGTAAGGCACTTCTCTTCTTACAGCGTGCAGTCTCACACTTACATAAAACTCAATGATCACTAATGTTGTTGCACTTCTGCCAGGAATTTACCCACCTTTTCACCCAATGATTGGATTACAGTTCTATACTTGCGGAAAGCTTGAATGGTATGGAATACTTTTCCCTATTCACCTACTTACTGTGTTCATATATCGCGGAGTAACAACTTTCATTGTCAGTATAAGCTTTGGCCTTTGGCTATTTCATGTTACTAAAACAAGTTAGCTGAATTAATGCTAGTAGGATAGCTGGATAGGGACATGCTTTTTCAAAAGCTTCAGTGAAATGCTGTCAATAGCTTACCCAGAAGTCTGTTCGAAATTCCTTGAGTCTTGAATATTTGTACCCTTAAAGGGTCACACTCATGATGTTTACAGTTACATCTAGATGTTCCTGTTGCAGGTTGCTTGAGTACACAGAGGATGCTCTGATGTCTTTAACCAGGGCAGCAGATATACTTCGCATAACGCATGGGACTAAATCCGAGTTCATGAAGGAACTTTTGGGCAAGCTAGAAGAAGTAAGGGCTGAAGCTTCTTTTAGGCTCTCGGCTGGAGATGAACAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009959

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009959&oldid=54782"