BGIOSGA010070

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Revision as of 09:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010070| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010070, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA010070

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010070, complete gene.

LocusTag

OSJNBA0035I24.8

Ensembl Transcript ID

BGIOSGA010070-TA

Ensembl Protein ID

BGIOSGA010070-PA

Length

7212

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30593742..30600953

Sequence Coding Region

30600673..30600953,30600017..30600163,30599703..30599766,30599389..30599598,30597083..30597277
,30596700..30596998,30595288..30595564,30594877..30595152,30594293..30594526
,30593742..30594092

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30593742..30600953 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30593742..30600953 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAGTAGGCGCTCTTTTGACCTCAGCTGGAATCAACATTAGCCTCTGTATACTTTTTTTGTCACTATATTCCGTTCTGAGGAAGCAACCGCAAAATGTTAAGGTCTATTTTGGAAGAAGGATTGCTGAGGAGAATAGTAGGCTCAGGGAGGCTTTTATTTTGGAGAGATTTGTTCCATCCGCTAGCTGGATTTTGAGAAGTCTTCGATGCACGGAGGATGAACTCTTAGCTACTGCTGGGTTGGATGCAGTTGTCTTCAATAGGATTCTTGTATTTAGCATACGCATATTCTCCTTAGCCGCTTTCCTTTGTGTACTTGGAGTTCTTCCACTGAATTATTTTGGACAAGATATGCTCCATGTACGGATTCCTTCAGCATCGTTGGAGACATTTACAATTGGAAATATGCAAGAGAGATCAAGATGGCTCTGGGTCCATTGTGTTGCGCTGTACATCATATCTGGTGTGGCTTGCCTTCTTCTATACCTTGAGTACAAGCATATTGCTAGGCTGAGGTTACTTCATGTTTCTCGAGCATCGACCAATCCTAGCCATTTTACTGTGCTTGTTCGTGGAGTACCAAAATCAACTAAAGAATCAATTAGTTGCACTGTTGAGAGTTTCTTCACCAAGTACCATGCGTCGAGTTACCTTTCTCATCAGATTATTTATAAAGTCGGGAAACTTCAGAAGATTGTGACTGGTGCAAAGAAGGCTTATAAGAAGTTTAAACATTTCAAGGGCACCACAGTTGATCAGAGATGCGGACCAATTACATATAGATGTGGTCTTTGTGGAGCTTCATCAAAGTCGTTCGAGCTGCTGCCTGTTGAACCTGAGCAAGAGATGAAAAAACATGATGTGAAAGATTCAGAGTTGAGCTTACCTGATAAGGATTGTGGTGCTGCTTTTGTATTTTTCAAAACTCGGTATGCAGCCCTGGTCGTATCAGAAATTGTTCAGACATCCAATCCTATGGAATGGGTTACTAGTCTTGCTCCAGATCGAGATGACGTATATTGGTCAAATCTTTGGTTACCCTACAAGCAGCTTTGGATTCGCCGTATAGTTACACTTTCGGGTTCTATTGTTTTTATGTTCCTGTTTCTCATACCTGTGACATTTATACAAGGTCTAACTCAGTTGGAGCAGCTGCAGCAAAGGCTCCCTTTCCTAAATGGCATATTAAAAAAGAAGTACATAACCCAGCTAGTGACCGGATACCTTCCCAGTGTCATCTTGCAAATATTTTTGTACACTGTTCCCCCAACCATGATGTTTTTTTCTACATTAGAAGGACCCGTGTCCCACAGTGAAAGGAAGAGAAGTGCCTGCTGTAAAGTATTATACTTCACTATTTGGAATGTATTCTTTGTGAATGTCCTATCAGGTTCTGCAATTAGCCAAGTGAATGCGTTATCAAGCCCAAAGGACATTCCTATGGTGCTTGCTAGAGCGGTACCTGTACAGGCTACATTCTTTACCACCTATGTACTGACTTCTGGTTGGGCTAGTTTATCATCAGAACTTATGCAACTCTTTGGTCTCACATGGAACTTTATAATGAAGTATGTTTTGAGAATGAAAGAGGATAGCTACTTTGTCCCGTCATTTCCCTATCATACTGAAGTGCCAAAAGTTCTGTTGTTTGGACTACTGGGATTCACATGCTCTGTATTAGCACCTCTCATCTTGCCCTTTTTACTGGTGTACTTTTTTCTTGGTTATGTTGTGTACCGCAACCAGTTCCTCAATGTTTATTGCACAAAATACGACACAGGTGGTCTGTATTGGCCGATTGCTCACTATACAACAATCTTCTCTATTGTGCTCACCCAGATCATCTGTCTTGGTGTCTTTGGGCTTAAAGAATCCCCAGTAGCTGCAGGCTTCACTGTACCTCTCATCATCCTCACTCTTTTATTCAACCAGTATTGTAGCAATCGTCTTCGGCCATTATTCAAGACTCTCCCTGCACAGGATTTAATTGACATGGACAGGGAGGACGAGCAATCGGGAAGAATGGATGACATTCACCACCGTCTTCATTCTGCTTACTGTCAGTTTGCTGACACTGACGACATACCTCTGAAAGGAGTTCACGTTGACAGAGATGCAGAAGCAAGTGGAAGTTCTGGTGAATCTAGCTGCAGAGAAGACACCAACCAACCCACAACCAGTGACATTTCTCACCCTACACTGGAAGGACTCCCTGTAAACCGGCTACGGCATGTAGTGAGGTCGCTCAGTTCCATCATCAGGTTACAAAAGAGAGGCCTGTCACCACAGCCCGCTGGACCCTCCGCCGATGTAAATCCGCAAACTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MKVGALLTSAGINISLCILFLSLYSVLRKQPQNVKVYFGRRIAEENSRLREAFILERFVPSASWILRSLRCTEDELLATAGLDAVVFNRILVFSIRIFSLAAFLCVLGVLPLNYFGQDMLHVRIPSASLETFTIGNMQERSRWLWVHCVALYIISGVACLLLYLEYKHIARLRLLHVSRASTNPSHFTVLVRGVPKSTKESISCTVESFFTKYHASSYLSHQIIYKVGKLQKIVTGAKKAYKKFKHFKGTTVDQRCGPITYRCGLCGASSKSFELLPVEPEQEMKKHDVKDSELSLPDKDCGAAFVFFKTRYAALVVSEIVQTSNPMEWVTSLAPDRDDVYWSNLWLPYKQLWIRRIVTLSGSIVFMFLFLIPVTFIQGLTQLEQLQQRLPFLNGILKKKYITQLVTGYLPSVILQIFLYTVPPTMMFFSTLEGPVSHSERKRSACCKVLYFTIWNVFFVNVLSGSAISQVNALSSPKDIPMVLARAVPVQATFFTTYVLTSGWASLSSELMQLFGLTWNFIMKYVLRMKEDSYFVPSFPYHTEVPKVLLFGLLGFTCSVLAPLILPFLLVYFFLGYVVYRNQFLNVYCTKYDTGGLYWPIAHYTTIFSIVLTQIICLGVFGLKESPVAAGFTVPLIILTLLFNQYCSNRLRPLFKTLPAQDLIDMDREDEQSGRMDDIHHRLHSAYCQFADTDDIPLKGVHVDRDAEASGSSGESSCREDTNQPTTSDISHPTLEGLPVNRLRHVVRSLSSIIRLQKRGLSPQPAGPSADVNPQTA</aaseq>

Gene Sequence

<dnaseqindica>1..281#791..937#1188..1251#1356..1565#3677..3871#3956..4254#5390..5666#5802..6077#6428..6661#6862..7212#ATGAAAGTAGGCGCTCTTTTGACCTCAGCTGGAATCAACATTAGCCTCTGTATACTTTTTTTGTCACTATATTCCGTTCTGAGGAAGCAACCGCAAAATGTTAAGGTCTATTTTGGAAGAAGGATTGCTGAGGAGAATAGTAGGCTCAGGGAGGCTTTTATTTTGGAGAGATTTGTTCCATCCGCTAGCTGGATTTTGAGAAGTCTTCGATGCACGGAGGATGAACTCTTAGCTACTGCTGGGTTGGATGCAGTTGTCTTCAATAGGATTCTTGTATTTAGGTATGTACACAATTACTTGATTCTCTGTTCCACTTAAATATTTTTTATCTTATTTGAAGTTTATATAGATGTTTCTTTTTATGCTGTTTCTTTGTGTGCCTTGAGAGTTTAGACCATCAGGAATCAACTTATACTTTTGCTTAAAAGGTTCGCCGTGGCGCTTTGAAAATGAAAATCAAGCTAAATACGATTATTTAAACTAGTGGTTTTTAATCTCTAATTGTTGACTGGTATGATGAGTCATTTCCTCTGTCAAATGGGATAGGTAAAAAAACACAAAATAGAATATGGGAATCAAATAACTTCAAAAAAGTTAATGATAATAAAAAATCTTATGCCAAAGTTGATAATGTGCATACCAACATTCATCGGGGTGTCACATGGTATGCCACATAAAGTTAAGTTACTTTATATATATTCATTTGCCTACTGCATTCTCACTATATTACTTAAGTCTTCAATTTTGGTTTTATATCCAAGATATGCTTATGTGTTTTTCTTTTCAATAGCATACGCATATTCTCCTTAGCCGCTTTCCTTTGTGTACTTGGAGTTCTTCCACTGAATTATTTTGGACAAGATATGCTCCATGTACGGATTCCTTCAGCATCGTTGGAGACATTTACAATTGGAAATATGCAAGAGAGATCAAGATGGTGAGCTATGGAGCTTCTCTTACATGATTATGTTCGAACTTTAAGAGTTCAAATGTTAAATACAACATCTTATGTATTTATCTTCAGTCCGTAACTGATTTTATACTGTCTGCTGGTGTGGTGTTATGTGCAATCTAAAGTAACTAGTTCACGTTTATTGCATGCACTGATAACTGAATTGTTTAGGCATACATTATAGAAAGTCATAGATACCTCTTGGATTCTTTTTACACATTGGCTATAACTGCAGGCTCTGGGTCCATTGTGTTGCGCTGTACATCATATCTGGTGTGGCTTGCCTTCTTCTATACCTTGTAAGATCAAGTCATTTGATCTTTCAATAGTTCATAAATGCTAGTTAATCTTATCTTTAGACCTTACTAGCTGATTTATGTTATTTTTTATGTGGTTCCTTTAGGAGTACAAGCATATTGCTAGGCTGAGGTTACTTCATGTTTCTCGAGCATCGACCAATCCTAGCCATTTTACTGTGCTTGTTCGTGGAGTACCAAAATCAACTAAAGAATCAATTAGTTGCACTGTTGAGAGTTTCTTCACCAAGTACCATGCGTCGAGTTACCTTTCTCATCAGATTATTTATAAAGTCGGGAAACTTCAGAAGATTGTGGTAAGTAATACTGCAATAATTAATTGTGTAAATTTTCCAAATGAGGAAATTTAATGACGCTGCCAGTGAGAAACAGGATGAAAATGTTTAGTTATTTGGTTATTAGTCTCCTAAGGCCTTGTCTGGGAAACCCAAAATTCCAACCTATCCCTGTGGAAGACCGAGAAATTGCACTATAATCCTGCCCTGTCCATGGGATGAACAGGGAATTTGGGTCTCCCAGATGATACCTAGAGATTATTTATGCCCACACTGCATCATAACAGTACTAGGATCTGCTTGCTTTTTATAGTTAGTCCAATCAGTTGATAAGCACATATGCACTGTTAGAGGACTGCCTGAAGCCTTTAGCTGAGTGGTAGGGCATATGGTTGCAAACATGTGATGGTTGTGGATGTGTGGTTAACTGGTTATTCTCAACTCTTTTGAGAAAAATATCTCACTAAGAATTGGATTGCAAAGGTTTTTACATAGGAAAATACATCCAGGATTGGCTAGTGAGGAACTGAGCCTAGCTCAGTTGGTCAATGGTGTGGATGTACGCCTAGACCACCCAATTCCGATTCCTTGTTGAGGCAAATTTGGGTGCCGATTTTCTTGTTAGTACAATGTTCCCTAGTTCCTGCTAGGTTGATCCCTAGTTGGAGTAATTGGAGTAATTAAAAGTGAGGGCGATCTGCTCTCCCCACAGCGCTCTGCCCGTTTTTGGCATGGCGTGTTCGTTTCCGCGGCTATCCACGTCATCCGGGGCTGGTCCTGGCAATTTGCAAAAAAGTCCTCTCTTAACTTGATAATTGGAGTAATTAAAAGTGAGGGCGATCTGCTCTCCCCACAGCGCTCTGCCCGTTTTTGGCATGGCGTGTTCGTTTCCGCGGCTATCCACGTCATCTGGGGCTGGTCCTGGCAATTTGCAAAAAAGTCCTCTCTTAACTTGATAATTGGAGTAATTAAAAGTGAGGGCGATCTGCTCTCCCCACAGCGCTCTGCCCGTTTTTGGCATGGCGTGTTCGTTTCCGCGGCTATCCACGTCATCCGGGGCTGGTCCTGGCAATTTGCATTGTTAAGTCCCTCAATATAAGTTTACTGTCTTATGTATTCTTACGTAATGGCCCTCTGTGTCTTGGTATATTCTATGTGAAGGAGACGAGATTCCGAATATAGGGACCGCGCTTTGAAAGAAGGAAAATAAGGGGGTTTTCTGCGAAAGGAGAAAATCCCTATCCCTCCTTTCCCCGAAACCCTAGCCAACACTGTTCCCCCAACCCTCTCTTCCTCTCTCGCTCTCTCCCCTGCCCTTGCGACGGCGCTGCCCTGTGTTCTCCTCGCCGCCAACGGCCTCCCCGCCGCATTCTCCCCATCCTCCCCCATCTCCTGGCGCTCCCCAATCCCCGTCAACCCTAGCACGTAGAGGCCACTGCCGGTCTGCCCTCTCGTTCTGTTAAAGATTAGCAGGTACGGTCTCGGACACTTGTCGGTTAGACATTATGTTTTTTACTTCCAGTATGCAGAATCTTTGTAGCTTTCTAGAGCACAAGATCTTTGTTTAATCAGATAAATCGGGACTACAATAAGAACTTGGTACAGCCATTTAGAAGTTCTGTGCACTATTTTGACCTAGGTCATTTATGCATATTGCTTATGGCCTGTCCCCTTGAACATTCATATCCCTCAGTATCAGCGCCTCTCCTGACTTGGCATGCTAGAAAACTCTCAATACTTCTGCTAAGTTCTTGTGCACAATCTTTGTATTTTGTAGTGCTTTTGCTCACCACGCCCTTTGCAAATGTAATTCCTTTTTTGGTGGTTAGTTTGAATAGATGACACTCAAATTTTTAATTCATGTGATAGATGCCGTCGCATAACTAAAATGTATATCTGCTAACAGACCAAATTAATAGTGTAGGTTTGTTGCTCCATGATACTTTGTCCAATATATGAAAAGAGAATTATTGATTGATCATAGTCATAGATATTTGAATGAACACATTTGATGTATCTTTATGTTTTCCCTGTTTGTAGTGATAACTTTTGTCCCATATCTGGAAAGGGATTTTTGCATCTTCATATATTTCCCCTGTTTCTAGTGGTAATTTTGTTTTTTTTTTTGGCAGACTGGTGCAAAGAAGGCTTATAAGAAGTTTAAACATTTCAAGGGCACCACAGTTGATCAGAGATGCGGACCAATTACATATAGATGTGGTCTTTGTGGAGCTTCATCAAAGTCGTTCGAGCTGCTGCCTGTTGAACCTGAGCAAGAGATGAAAAAACATGATGTGAAAGATTCAGAGTTGAGCTTACCTGATAAGGTCAAACTGGCAATAAAATTGGTTATTTACTGTTCTGAATAAATTAGCCTAAAACAATAATTTTATTTTGGGAGATGAATGCAGGATTGTGGTGCTGCTTTTGTATTTTTCAAAACTCGGTATGCAGCCCTGGTCGTATCAGAAATTGTTCAGACATCCAATCCTATGGAATGGGTTACTAGTCTTGCTCCAGATCGAGATGACGTATATTGGTCAAATCTTTGGTTACCCTACAAGCAGCTTTGGATTCGCCGTATAGTTACACTTTCGGGTTCTATTGTTTTTATGTTCCTGTTTCTCATACCTGTGACATTTATACAAGGTCTAACTCAGTTGGAGCAGCTGCAGCAAAGGCTCCCTTTCCTAAATGGCATATTAAAAAAGTAAGTAATCTAAACGCTCAATGCCTACCTACTGCTTCTTTGCTAGGTGTCATAAAGAAAAAAAAAAGAGTGATTTTCGCATCAAGCATGTCAGAGATTACTTGGGTGTGTTTATGTACCCTAACTATTTACCTTATTTGATTGGAGAGACATGGCTATGGGAAAGTACATTTTTACATCATATATATGTGATAATTGTGTCATTTTTTACCTTTCCATGTGAAATCTGGAAGTCCAGGGTTGGGAGGTAGACTTGCTGTCATTACCGATTTCTTCTCCATTAGCAGTTTATTATAGTAACATATACATTTTTCTAGATCTACTATTTGGTGCTCAGGGCGTCCCCTGTCTGTTTACAGTCACAGGGGACGCATTTACTACTTTGGGGGATGCTTCTACTATCGCTGAATATTTAGGCCCTGTTTAGTTCCCAAAATCTTTTTCCTAAAAACATCCCATCGAATCTTTGGATACATGCATGGAGCATCAAATATAGATAAAAACAAAAACTAATTGCACAGTTATGGGAGAAATCGCGAGACGAATCTTTTGAGTCTAATTAGTCCATGATTAGTCACAAGTGCTACAGTAACCCACATGTGCTAATGACGGCTTAATTAGGTTCAAAAGATTCGTCTCGCGGTTTCCAGACGAGTTATGAAATTAGTTTTTTTATTCGTGTCCGAAAACCCTTTCCGACATCCGGTCAAACGTTCGATATGACACCCAAAAATTTTCATTTCGCGAACTAAATAGGGCCTTACTACTTTGGGGGATGGATTTTTTTTTTAGATAATGGAAGCTTTATTTAGACTCAGTTAATTACATCAAGATGATACAATCAAACTGAGTCACCCCCGGCCTCTGCATAAAATGCACACAGCCAATGGGGGATGGATTTACATTCTCAGGGGTGGGTCACTGTTAGTTCCCTTGATGCTAGTTAGCACTTCCATGTATTTTTGTTTGTGTTGCCATGCCGTATGCACCATGTTCAAAACATTCCATCTGTTTTTTAGGCTTTAAACTTGAGGTAACATTATAATTATTGCACGCACAGTATTATCTTCTGGCATGTTATTTTATTCCTTTATTCATTTGTAGAGGAACATAAAAATGTCTATTTCTCTTGCAGGAAGTACATAACCCAGCTAGTGACCGGATACCTTCCCAGTGTCATCTTGCAAATATTTTTGTACACTGTTCCCCCAACCATGATGTTTTTTTCTACATTAGAAGGACCCGTGTCCCACAGTGAAAGGAAGAGAAGTGCCTGCTGTAAAGTATTATACTTCACTATTTGGAATGTATTCTTTGTGAATGTCCTATCAGGTTCTGCAATTAGCCAAGTGAATGCGTTATCAAGCCCAAAGGACATTCCTATGGTGCTTGCTAGAGCGGTACCTGTACAGGTGAATTGCATGCTCACTTATTTTGGCTATCAGGATGCAGCAAGTATTTCTGTTACGCATATACAACTTGTTGATTTGTTAATAGTGTTGTTCAATTTTACTATAATTTTTTAATACTGTTTTTATTTGTCTCAGGCTACATTCTTTACCACCTATGTACTGACTTCTGGTTGGGCTAGTTTATCATCAGAACTTATGCAACTCTTTGGTCTCACATGGAACTTTATAATGAAGTATGTTTTGAGAATGAAAGAGGATAGCTACTTTGTCCCGTCATTTCCCTATCATACTGAAGTGCCAAAAGTTCTGTTGTTTGGACTACTGGGATTCACATGCTCTGTATTAGCACCTCTCATCTTGCCCTTTTTACTGGTGTACTTTTTTCTTGGTTATGTTGTGTACCGCAACCAGGTGAGAAACTAGAGATTAAATTTTGATTCCAAATCAATAAATTATCCGTGATTATGAATATTGTTGAACCATAGTTATAGTGAAGATGACCAGACTAACTAATTATGGGAAGTTGGTATGAGTGCTTATGCATTTGTACTTTTTAGGTGAAAATGCAACTGATGCATTTTACATATACATGCTTCTAATTTTGTGTAAATTGTTGTTTCCTGGTTCATGAATGTAAATTCTCAGAGTGCAAAGTTTTGTGAAAGATTGGTCTGTTGTGCTTCTTTTCCCCGTTCCTACAATCTTTTTTTTGACGTAACCGTTCCTACAATCTAATGGGTTAACTTTTTTTTCATTTGCAGTTCCTCAATGTTTATTGCACAAAATACGACACAGGTGGTCTGTATTGGCCGATTGCTCACTATACAACAATCTTCTCTATTGTGCTCACCCAGATCATCTGTCTTGGTGTCTTTGGGCTTAAAGAATCCCCAGTAGCTGCAGGCTTCACTGTACCTCTCATCATCCTCACTCTTTTATTCAACCAGTATTGTAGCAATCGTCTTCGGCCATTATTCAAGACTCTCCCTGCACAGGTTAGTATGAGTTCACCTTTATATATTCTTGGAGGGATTTACGGCTAAACTTCTTGCCAGTTTACATTTATGTGCTCTCTACTGAGAGTACATATCTTGCACTTCTCTTCTGAAAATGCCAAAAAGTCCTATGTCGAAGCATTATCCCTGGCTACCTGAAATGAAATCTCTTACATTAGTTCTCTCTTTCTATTACATAGGATTTAATTGACATGGACAGGGAGGACGAGCAATCGGGAAGAATGGATGACATTCACCACCGTCTTCATTCTGCTTACTGTCAGTTTGCTGACACTGACGACATACCTCTGAAAGGAGTTCACGTTGACAGAGATGCAGAAGCAAGTGGAAGTTCTGGTGAATCTAGCTGCAGAGAAGACACCAACCAACCCACAACCAGTGACATTTCTCACCCTACACTGGAAGGACTCCCTGTAAACCGGCTACGGCATGTAGTGAGGTCGCTCAGTTCCATCATCAGGTTACAAAAGAGAGGCCTGTCACCACAGCCCGCTGGACCCTCCGCCGATGTAAATCCGCAAACTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010070