BGIOSGA010082

From RiceWiki
Revision as of 09:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010082| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010082, complete gene.| tag = OS03G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010082

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010082, complete gene.

LocusTag

OS03G0670100

Ensembl Transcript ID

BGIOSGA010082-TA

Ensembl Protein ID

BGIOSGA010082-PA

Length

2970

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30408135..30411104

Sequence Coding Region

30410992..30411104,30410391..30410487,30410157..30410285,30409650..30409745,30409461..30409538
,30409300..30409361,30409135..30409210,30408746..30408853,30408443..30408618
,30408275..30408359,30408135..30408176

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30408135..30411104 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30408135..30411104 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCCGTCCATCCCGGCGGCTCTCCGCCACCCGCATGCCCACGCCGCCGGCCTCCGCCTCCTCCGCTCCTCGGGAGACCCCTGCCCGCCCTGCACCCTTCCGTTTAGGTTATGTGGAGTGCCATTAAAAAAGGGCCATGTGTACGCTGGTGCTGTATCTGCTACCAGGAGTCCTGGCTTGGGCAATGCAGAGAATCTGCGTGAGAGTCCAAGCTTGTCAAGGAGCTGGGGTATGAATGGGCAGATTGGCGATGATCATGATATTCTTATAGAATGTAGGGATGTGCACAAATCCTTCGGTAACAAGAAGGTATTGAATGGCATTAGCTTCAAGATTAGACACGGAGAAGCCGTTGGAATAATTGGTCCTTCGGGAACAGGAAAGTCAACTGTTTTGAAGGTTATGGCTGGGCTACTGGCTCCAGACAAGGGCGATGTTATTATTTGCGGAAGAAAAAGACATGGGCTAGTTAGTGATGAAGACATATCTGGTGTCCGAATTGGCTTGGTGTTTCAAAGTGCAGCTTTGTTTGATTCTCTCACGGTTCGTGAAAATGTTGGATTCCTTTTATATGAAAATTCCAGCCTGCCTGAGGAGAGAATAGCTACACTAGTGACAGAAACATTGGCCGCAGTAGGCCTTAAAGGCGTTGAAGATCGAATGCCATCTGAATTGTCTGGTGGCATGAAAAAGCGTGTAGCTCTAGCTCGTTCAATAATATACGATGATACAAAGGAAACAATAGAGCCAGAGGTTATTTTGTACGATGAGCCTACTGCTGGACTTGACCCTATTGCATCCACCGTTGTTGAAGACCTTATACGTTCCGTACATGTAACAGGGAAAGATGCTCTTGGTAAGCCTGGAAAGATAGCATCTTATGTGGTTGTCACTCATCAGCATAGCACAATAAAACGAGCCGTTGACAGGTTGTTATTTCTCCATGAGGGGAAGGTAGTGTGGGAAGGAATGACACAAGAATTTACTACATCAACAAATCCTATTGTAAAACAGTTTGCATCTGGTAGCTTGGATGGACCGATACGGTACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MASPSIPAALRHPHAHAAGLRLLRSSGDPCPPCTLPFRLCGVPLKKGHVYAGAVSATRSPGLGNAENLRESPSLSRSWGMNGQIGDDHDILIECRDVHKSFGNKKVLNGISFKIRHGEAVGIIGPSGTGKSTVLKVMAGLLAPDKGDVIICGRKRHGLVSDEDISGVRIGLVFQSAALFDSLTVRENVGFLLYENSSLPEERIATLVTETLAAVGLKGVEDRMPSELSGGMKKRVALARSIIYDDTKETIEPEVILYDEPTAGLDPIASTVVEDLIRSVHVTGKDALGKPGKIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGMTQEFTTSTNPIVKQFASGSLDGPIRYF</aaseq>

Gene Sequence

<dnaseqindica>1..113#618..714#820..948#1360..1455#1567..1644#1744..1805#1895..1970#2252..2359#2487..2662#2746..2830#2929..2970#ATGGCGTCGCCGTCCATCCCGGCGGCTCTCCGCCACCCGCATGCCCACGCCGCCGGCCTCCGCCTCCTCCGCTCCTCGGGAGACCCCTGCCCGCCCTGCACCCTTCCGTTTAGGTAAAAGAAAAATCATGGCCTGAATCTCTTCTTCTTCTTTTTTTTTGTTTCTTAGATGTTTTGTCTAAGTTGTTTTGGAGCATCTCTCCCGTTACCTTGGGGTTGCGATTCTGTAGGGAATACAATTGTGTTGGCAGATCACGGCTTGTTGTTGAATTGCTCGAGCTGCGTGAGTAGATTCTTTGCTTTCATCAACAGTTCAGAGGAGGAGAAAGGGAGAAAGCGATTTTGCACTGTAGTTAAAAATTTCTTTGCGTTTTTTGATAGCTGACCCCGATTAGGCTGAAAAAATTGCGAAGCGCGGTTAGTTTGGCAGCTGGTTAAATTGCTCATATGAAAAGGGAAGAATGTGGCTGTTGTGCTGTTCTTGTGTAGTACTATGCTGGTTCATCCTGTGCCATGTTCATCTTTGTGAATATTTATCTGCAGTATTGCGTCCAATGTGATTGGTTTTATCAAATGAGATATGGTATTCATATTTCGCATATGTTCTTGCTTAGGCAGGTTATGTGGAGTGCCATTAAAAAAGGGCCATGTGTACGCTGGTGCTGTATCTGCTACCAGGAGTCCTGGCTTGGGCAATGCAGAGAATCTGCGTGAGGTATGCTCTTGCAACGATGCCTTGATCCTGATATAGCTTACTTGAATTGCGGTGCCTTGGAGTTTGGGGGTGATAAATTGTATTTTTGTTTCCGTCATGCTTTAGAGTCCAAGCTTGTCAAGGAGCTGGGGTATGAATGGGCAGATTGGCGATGATCATGATATTCTTATAGAATGTAGGGATGTGCACAAATCCTTCGGTAACAAGAAGGTATTGAATGGCATTAGCTTCAAGGTAAGTTCTTTTTCAAGCAATTCTTTCCAGTTTCCAATTCTCATTGGTTCTCTGGTTTTCTACATCTTGGGCATTATTTGTAATCAACTACTTGGGTGCCTAGTACATATCCCATTTCAAGTATTGGAGCCACTCAACTGCATCTTCTTCAATGCTGATCCCAGAGTTAATGTACTTTACAAGTATTCAAAGCAAATTGGAAGCACAAATCGAATTGTTGTCATTCTGAATTTCTGTTTCCTTGCTCATATAGTCGTACCACCACAAATTAACCACTAGTTCTCTTACGTTGATCATACTCTCCATTATCCAGTCACTAGGAATCATTACTTAGTTGATTATTTTATAATCTTTTGGTTTCATTTATTTTTAGCCTGCAGTTCAGTTATGGTTCAAATTATTATTATGTAGATTAGACACGGAGAAGCCGTTGGAATAATTGGTCCTTCGGGAACAGGAAAGTCAACTGTTTTGAAGGTTATGGCTGGGCTACTGGCTCCAGACAAGGTTATCGCATCTTCTTGATTATCTTTATTAAAACAATAGGCTTTTAGGAGGTTCCCGTTTGATGTGCTGATGGCTGTTGTATTTTTATTTTAAATCTGTGATAATGAGAAGGGCGATGTTATTATTTGCGGAAGAAAAAGACATGGGCTAGTTAGTGATGAAGACATATCTGGTGTCCGAATTGGCTTGGTATACTCTTTAATTACTTCAAATCTGCCGAATAAATACCATGATAATTTTATCGACCAACTGTTCTCGAAAATTCTAAAATGGTCTTTGCCTATGCAGGTGTTTCAAAGTGCAGCTTTGTTTGATTCTCTCACGGTTCGTGAAAATGTTGGATTCCTTTTGTAAGAACAATTACCTTCCATAAGTCTATTGAGAGTAGTCAATCTACTTGTATTTACTAATCTCGGTTTCCTCTGTCCTTTGGCTTTAGATATGAAAATTCCAGCCTGCCTGAGGAGAGAATAGCTACACTAGTGACAGAAACATTGGCCGCAGTAGGCCTTAAAGTAAGTCAAGTTTTTTTTTTTTTCATGTTGAAGTTAAAACTAAGCATAGAATAGTCCCAAATTTTGGATTAGCGGTAAGCCAATCGCAGGCAATGCTTTTATGTGATTGTGCAAAGTTTTTGTCGGAGATAATTTAAGAGGCAAAACTATAGCTTGGATTGTTGAGGAATTCTAGATTTCTGTATTAGCTTACATAGGATGAAAGGATTATCAGTATTTTTCTACTCATACTTGTGATTTTAACATAGACTTAGATATATTATCACCATCGGTCTGTGCAGGGCGTTGAAGATCGAATGCCATCTGAATTGTCTGGTGGCATGAAAAAGCGTGTAGCTCTAGCTCGTTCAATAATATACGATGATACAAAGGAAACAATAGAGCCAGAGGTATACCCTGACTAATCTCTTCAGTCATTACGAGTAAATTGCTGTAATAGTTCACAGGAAAAGGAGATCAAACAGCTTAGCTTACTATTGACTGTCTTCTTGATATTATACATTTTTTCCATTACAGGTTATTTTGTACGATGAGCCTACTGCTGGACTTGACCCTATTGCATCCACCGTTGTTGAAGACCTTATACGTTCCGTACATGTAACAGGGAAAGATGCTCTTGGTAAGCCTGGAAAGATAGCATCTTATGTGGTTGTCACTCATCAGCATAGCACAATAAAACGAGCCGTTGACAGGTAATAGCAGGCATTGTTTTGCTGGTGGCTTCCAGCTTTCTGTTGTCCATTGCTAAGCTGAGACTCTTGTACTCAACTTTCAGGTTGTTATTTCTCCATGAGGGGAAGGTAGTGTGGGAAGGAATGACACAAGAATTTACTACATCAACAAATCCTATTGTAAAACAGGTAATGCAGTAATGTCTTAACTGTGTGCCTCACAAGAACCAAGTAACCTTAATATACTCGATCTTGTGTCTCACTCCATCGCCATTTGATATTTGTAGTTTGCATCTGGTAGCTTGGATGGACCGATACGGTACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010082